Pleuronectes platessa (European plaice): 128440049
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Entry
128440049 CDS
T09923
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128440049 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pplt03041
]
128440049 (snrpa)
Spliceosome [BR:
pplt03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
128440049 (snrpa)
Complex B
128440049 (snrpa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_ACIN1
DUF4523
RRM_MUD2_C
xRRM
Motif
Other DBs
NCBI-GeneID:
128440049
NCBI-ProteinID:
XP_053278601
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All DBs
Position
5:complement(11128110..11131083)
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AA seq
280 aa
AA seq
DB search
MATTDVRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVAQNLKMKGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIQYAKMDSDIIAKMKGTFVERDRKKEKKKPKVPDAAG
AKKGVAGAAVPMVAGVPAAMPGMPPMSQAPRMMHMPGQPPYMPPPGMMPPPGMAPGQMPP
GGMPPGQMMPGQMPGQMPVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPG
RHDIAFVEFENEVQAGAARDALQGFKITQSNAMKISFAKK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggccacgacagacgtacggctcaaccatacaatctacatcaacaacttgaatgagaag
atcaagaaagatgagttgaaaaagtcgctgtacgccatcttctcacagtttggacagatt
ttggacatcctggtcgcacagaacctgaagatgaagggtcaggcctttgtcatcttcaaa
gaagtgaacagcgcctcgaatgctttgagatccatgcagggattccctttctatgacaag
cccatgcgtatccagtatgccaagatggactctgacatcattgctaagatgaaggggacg
ttcgtagagcgtgaccgcaagaaagagaagaagaagcccaaagtacctgatgcagcggga
gctaagaagggtgttgcaggagctgctgtgcccatggtcgctggagtgcctgctgccatg
cctggaatgcctcctatgagccaggctccccgcatgatgcacatgccaggccagccgccc
tacatgccccctccaggcatgatgcctcctccaggcatggcacctggtcagatgccccct
ggtggtatgcctcctggtcagatgatgcccggacagatgcctggacaaatgccggttgcg
gaaaatccaccaaatcacatcctcttcctcaccaacctgccagaggagaccaacgagctc
atgctctccatgctcttcaaccagttcccgggtttcaaggaagtgcgtctggttcctggt
cgccacgacatcgcctttgtggagtttgagaatgaagtgcaagccggcgctgcacgagac
gcactacagggctttaagatcacacaatcgaatgcaatgaagatctcgttcgcaaagaaa
taa
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