Pleuronectes platessa (European plaice): 128440062
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Entry
128440062 CDS
T09923
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128440062 (vps53)
Membrane trafficking [BR:
pplt04131
]
Protein recycling
Others
EARP complex
128440062 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
128440062 (vps53)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
hAT-like_RNase-H
Syndetin_C
COG5_N
FBF1
Laminin_II
PsaD
NBD94
Sec8_N
HAUS1
Motif
Other DBs
NCBI-GeneID:
128440062
NCBI-ProteinID:
XP_053278615
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Position
5:18464760..18493017
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AA seq
825 aa
AA seq
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MMEEEEFELAEDLESILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFHKYMGITQIRQLSERVKAAQSELGTQILADFEEAFPSQGSKRTGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITRVELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGSTLTDVPGKKRSESPLEPTNPFLEEEPGEDVDLAKPRKPKAPDNPFHGIVSKCFEP
HLYVYIESQDKNLGELIDRFVADFRAQGPPKVGTEEGGAVLPSCADLFVYYKKCMVQCSQ
LSTGEPMIALTTIFQKFLREYAWKILSGNLPKSSSSSGGLTISSLLKEKEFSDASKFTVD
ELCLICSILSTAEYCLATTQQLEEKLKEKVDKVLVERINLTGEMDTFSTVISNSIQLIVQ
DLDSACDPALTAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPIIRDNLASTRKYFTQFC
IKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRKAPASYTK
IVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLKRSEQSSML
ELFRQRLPTPPSGADGGPTLSFSGATPEQESSRIRKLEKLIKKRL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaagaatttgagttggcggaggatttggagtcgattctgcatctcacc
ccggaggtgcagctcgccattgagcaggtttttcccagtcaggaccctctggacagagca
gacttcaatgctgtggagtacatcaacacactgttccccactgagcagtccctggccaac
attgatgatgtggttaacaagattcgtctcaagattcggcgtctggacgacaacatccga
acggtggtgagaggacagaccaacgttggccaggatggcagacaggctttggaggaggcc
cagattgccatccaacaattgtttggcaaaatcaaagacatcaaggacaaggcagagaag
tctgaacaaatggttaaggagattacgagggacataaagcagttggaccatgccaagcgc
cacctaactacatccatcaccaccctcaaccacctgcacatgttggcggggggtgtggac
tctttagaagccatgaccagaaagaggcagtatggtgaagttgccaacttgctgcaggga
gtggtcaatgtgctggaacatttccacaagtacatgggcattacccagatcagacagctt
tctgagagagtgaaagcagcacagagtgagttggggactcagatcctggcagattttgaa
gaagccttcccctctcagggctccaagagaacaggtggtccaagtaacgtgctgagagat
gcctgcctggtggccaacgtgctggacccgcgcatcaaacaagagatcatcaaaaagttc
atcaggcagcacctctcagagtacctggtgctcttccaggaaaaccaagatgttgcttgg
ctggacaagatcgatcgccgctacgcctggatcaaacggcagctggtggactatgaggag
aaatatggacgcatgtttcctgaagaatggtgcatgactgagaggattgctgtggagttc
tgtcacatcaccagggtggagctagccaaagtgatgcgaacccgagcaaaggagattgag
gtgaaactgcttctttttgccattcagagaaccaccaacttcgagggtttgctggccaaa
cgcttcacaggatccaccttgactgacgtacctggaaaaaagagatcagaaagccctctc
gaacctaccaaccccttcctggaggaggagccaggtgaggatgtggatctagccaagccc
aggaagcccaaagctcctgacaaccctttccacggcattgtctccaagtgtttcgaacct
catctatatgtctacatagagtcccaggacaagaacctaggcgagctgatcgaccggttt
gtggccgacttccgagcacaaggcccacccaaggtgggcacggaggaaggcggagcggtc
ctgcccagctgtgctgacctctttgtctattacaagaagtgcatggtgcagtgctcacag
ctgagcaccggagaaccaatgatcgccctcacaactatcttccagaaattcctgagggag
tacgcctggaagatcctctctggaaaccttccaaagtccagcagtagcagtgggggtctc
actatcagcagtctgctgaaggagaaggaattttcagatgcttcaaagttcactgtagat
gagctctgtctgatctgtagcatcctcagcactgcagagtactgtttggctaccacacaa
cagttggaagagaaactaaaggaaaaggtagataaagtcctggtggagagaattaacttg
actggagagatggatacattcagcactgtgatctcaaacagtattcagctgatagttcaa
gatctggactctgcctgtgaccctgctctcactgctatgagcaagatgccgtggcagagt
gtggagcatgtgggtgaccagagtccttacgtgacgtcaatcatcatgcacattaaacaa
aatgtgccaatcatcagagacaatctggcgtccacccgcaaatacttcacacagttctgc
atcaagttcacaaattctttcattcccaaattcatcaaccacctgtttagatgtaagcct
atcagcatggtgggagctgagcaactccttctcgacacccactccctgaagacagttctg
ttggatcttccctccataggctcccaggtgctccgcaaggcacctgccagctacaccaag
atagtggtgaaaggaatgaccagagcagagatgatactgaaggtggtgatggccccacat
gaaccaccagtggtgttcgttgacaactacatcaagctcctggctgacggcaacccagag
accttccagaagattctggacatgaagggtctgaagcgcagtgagcagagcagcatgctg
gagctgttcaggcagaggttacccactccaccctctggggctgacggaggccccaccctg
tccttcagtggtgccacccctgagcaggagtcgtcccgcatccgtaaactggagaaactc
atcaagaagagactgtga
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