Pleuronectes platessa (European plaice): 128440260
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Entry
128440260 CDS
T09923
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03440
Homologous recombination
pplt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128440260 (brca2)
03460 Fanconi anemia pathway
128440260 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128440260 (brca2)
03036 Chromosome and associated proteins [BR:
pplt03036
]
128440260 (brca2)
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128440260 (brca2)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
128440260 (brca2)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
128440260 (brca2)
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
128440260 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
128440260 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA-2_OB3
BRCA2
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
128440260
NCBI-ProteinID:
XP_053278899
LinkDB
All DBs
Position
5:complement(5849858..5862823)
Genome browser
AA seq
2890 aa
AA seq
DB search
MESPWNMYDTFKDEIWKELGQLDPDWFHVLSAQTSTSEGNGSDQDELCANQEGNFKAPCD
RTALESQLFSTPKVFRRSRVVSPETEGEQSFTAEQEKEARPWKETQSPCLFHMTKERISE
SKCGRFDFLQTSPKSPVSYAKQISESLGAQIHPDISWTSSLNTPPAVPSTLILSKTDESP
SPMSVSEDSNVVFVRKLFPSLSNASVATAVSPQNNHVLVHTGVVSPEAAQNPESHNSPQD
SPHPSPSVWRQKLPDAIEDGDVRSTVASVLDGAENVLSMFFSNSSSALRKVKTDRIKRKQ
IISTKERVGSFTDVSITNSAASLEQRTDDREPVKISSPPPQKTRDTGITQWSPLSLSDIP
PSSVDSSCRDNNHAATQVDNKTVPEQLRSSSDSSQLTRPHLTGSYYGFTKKKRQFVYTIE
TPKPQAQGNEPPSVKNDTSPRIPGNKGSAKLLGEIQDEADCCRIKEDETQKQKNDTEENV
PLPVQPKAQELDMSQLCRDFAQDFSQMLGPGKPSKVAEVTPQNGFSPSTCLNAMKQAKQR
GRQANVPLDCDHTTERKPVSATAQNFSINEGTGFDSGFPSAVADISHLTSTSFILPSSEN
NAQSQQKTVFKTETQRPASSLSTNIKHVKYHQGAETEAKLSSAVKEGQTLGPCRESEFHI
ESTSTELPSGATEGVDTINHFPAKFPSDGNFPERATVSLPSVHASVFKTASNKAIEVSPA
HLERAKHLFEENKAERPFSAESTKRGSGAKEEIHTSIDPVKNTIAASKQPPSSSERFGEI
SCQLTASQKADVTALCTLMEEADSQFDFTQFKTAKLQQHCQDEATSPQKADKELDPDFFM
GIDFDDSFSSDAEKHKMTSASNCEASTLTNRSTLTKETPSTEDASPSSKSISDRRRCIVS
AEPQNPNRAGFTETSEQENKTPLMPSVGFKTARGSDLRISKEHLRKARALFADLGENLTD
QKLGDKLSSDAAAKSEQRQITSITDTNAALTFNNRKMEASSYQSDFQLSSGKGVSISAKA
MQEADSLFKDCDITDNKPAASVKHQKNTEQFPTVSHTKSLLKFKGMQGFKENFSEEAIGE
CSKASAGPAASHTKVVQHKSTLKAFSSPLCSTSKSSGSSGMNQSNNGGGFSTASGKKVCV
SADAVRKAERLLNESHAPEDTKNQLQQEGDALRTAHVADQIQVGPIKNGGFQTASGKGVV
VSAAALKKAKLLLIQCEAVEDEIDVKPSHSKTPVRGLASRTSGFLAASGKPVGLSAEALR
KAKALFSDITLSAELPAVSDTKETQGNADNSDKTHCGFITAGGASGGLSKKKKFKAKNIL
KEFDNGSDSVESLQEAEAFFEDCDNMDRDNGTMVKYESSVAPVRGGDSEKEQDQGLTDTS
EERGSGHSVNKNGFLHPGDVRTLEDLTNGNPSKHLSTRLCTTSEKTGTSDFKTFSSGGGF
CTASGKKVCVSDDAMTKAKSLLNESALVTDTNKNLKQKEDSGTPQSVKGVALSFAAQNKV
KTTNTKLLVSCVPQRKGGFLAASGKPVAFSYEALQKAKALFSDMDLSAEIPTVSGTRKSD
KHEEAQNSAGKISCGFSTAGGAKVSVSATNLLNAKNLFKELADEETPPSDSYSRSPRARK
SDLSNIENVERSTDCTFMTANDKDMSAEESVPEVVESFPSVLTDPENEILRENALKGASE
VKEGKTSTSWESKLHDTLRKETANVLGCEVQRTNCGEGPNSKRPEESSFQMFPSLHFSGC
SETQQRFLAQEALDCTKALLEDESLSVTSENEPVQDYPGSNATSAEEQKGRGKRLGDNAN
MTGQPPLKRRLLEEFDRTVVGPRGLTLQPLKTCPDSVMKDRRAFKFQTSPHPNITQPHRN
GKNYVEAKLQNTTPTQQCTSGGSRSAHSNKPAFAPPFLKNAKMETCKDAVLKVNTRTPPA
FVPPFKKQRTIVQESSCKPQQQQEEDKHQHLFVTPTNRSTVLPPTKKTQSSTDLAGNTRK
GDIPQVALADTKHDYLTDNHNVPVGGGSGDSAAKATREDDTFSRSQDMFQNLENVELARD
MQDMRIRKKKRQTIRPLPGSLFLTKTSGVSRIPLKAAANGKLPGRYSSKQLYGYGVHQHV
SDISSETAEAFRFNVHQFLKLEAFTDGGGVQLADGGWLIPSKDGTAGKEEFYKAMCDTPG
VDPKLMSEEWVFNHFRWIVWKQASMERSFPEAMGGLCLTPQQVLLQLKYRYDVEIDHSRR
PALRRIMEKDDTSAKSLVLCVCGVVSRGHSSIRPTRSDTKTPQGADAKVESPFAVVWLTD
GWYAIKAQLDEPLTAMLHKGRLAVGGKLIVYGAQLVGSQEACSPLEAPESLMLKICANST
RPARWDTKLGFHRDPRPFLLPVSSLYSNGGPVGCVDITILRSYPIQWMERKPDAGVVFRS
GRAEEKEERRYSSQNQKAMEILFAKIQTEFEKEQTGKNKPQRRRRTISRQDIANLQDGEE
LYEAVEDDPAYLEAHLSEQQMETVQTYRRSLMEKEQAELQDRYRRALEAESGDGTCPKRD
VTPVWKLCVLDSMGRGSVYQLNFWRPSSDLQALLKEGRRYKVYNLSTSEGKKRSGIETVQ
LTGTKKTQFQDLQAQEWLSEQFQPRVSTSFLNLQNPEFQPLCGEVDLTGFIISIMDGQGS
SPAFYLADGELNFVKVRCFSSFAQSGLEDVVKPRVLLALSNLQLRGQSLSPTPVVYAGDL
TVFSTNPKEVHLQESLSQLRHLLQGQQNFFLTAEEKLLHLLKSDGLRSISSPAVHPLTPA
GATDRRQDTKKSLIAQQPIRSVGSFTPVSGNLSAPTSLTEKDPKSLKRRRALDYLCRIPS
PPALSHLGSVVTPCVKKTFNPPRRSETPSTLKTEQTPARKPVVSPKEDEWVNDEELAMID
TQNLGVGDLM
NT seq
8673 nt
NT seq
+upstream
nt +downstream
nt
atggagtctccctggaacatgtatgacacctttaaagatgagatctggaaagagctggga
caactggaccccgactggtttcacgtcctgtcagctcaaacttccaccagtgagggaaat
ggatctgatcaagatgagctctgtgccaaccaagagggaaacttcaaagccccctgtgac
agaaccgcactggaaagtcagctgttctctaccccgaaagttttcagacgcagtcgagtt
gtgtccccggaaactgagggtgagcagtcgttcactgctgagcaagaaaaagaagcacgg
ccctggaaagaaacacaaagtccatgtttgtttcatatgacaaaagagaggatctctgaa
tcaaaatgtggacgttttgattttcttcagacctcacccaaatccccagttagctatgcc
aagcaaatatctgaaagtctaggtgcacagattcatccggacatatcgtggacgagttct
ctgaacaccccacctgctgtgccgtccactctgattttatctaaaaccgatgagagtccc
agtccaatgagtgtttctgaagacagcaatgtggtttttgtacggaagctttttccttca
ctttcaaatgcatccgtagctacagcagtatcaccccaaaacaaccatgtgctggttcac
acaggtgttgtttcccctgaggctgctcagaatccagagtcccataactccccccaggat
tcaccgcatccaagtccgagtgtttggcgacagaagcttccagatgctattgaggatggg
gatgtacgcagcaccgtggccagtgttcttgatggagcggaaaatgttctctccatgttt
ttctccaacagtagttcagccttgagaaaagtgaaaactgacagaatcaagagaaaacag
atcatttcgactaaagaacgagtcggcagctttacggacgtctcgattactaacagcgct
gcctcactggaacagaggacagatgatcgggaacctgtcaaaatatcctcacccccacca
cagaagactagagatactggaatcacccagtggtcgccattgagtttatctgacattcct
ccctcgtccgtagattcctcttgcagggataataatcatgctgctacacaagtggacaac
aaaactgtaccagaacaactgcggagcagctctgactctagccagctcaccaggccgcat
ttgacgggctcatactatggatttacaaagaaaaagagacaatttgtttacaccattgag
actccaaaaccacaagctcagggaaacgaaccaccgtctgtgaagaatgacacctccccc
aggattccagggaacaaagggagtgccaagctgttgggtgaaatccaagatgaagcagac
tgttgcagaatcaaggaggatgagacacaaaaacagaaaaatgacacggaagaaaacgtt
cctcttcctgttcaaccaaaagcccaggagctcgacatgtcgcagctctgcagagatttt
gcacaagacttcagtcaaatgttaggcccagggaaaccaagcaaagtagcagaggttact
cctcaaaatggcttctctccctcaacttgtctgaacgccatgaagcaagccaagcagaga
ggaagacaagcaaacgttcctcttgactgtgatcacaccactgagagaaaacctgtttct
gccactgctcagaatttctccatcaatgagggaacaggatttgatagcggattcccctcc
gctgttgcagacatctctcatctgacttccacatcctttattcttccaagctccgagaac
aatgctcaaagtcaacaaaagactgtctttaaaactgaaacccaaagacctgcttcttcc
ctatctacaaatattaaacatgtaaaatatcatcaaggagctgaaactgaagctaagctg
tcgagtgcagtgaaggaaggccagacactgggcccttgcagagagagcgagtttcacata
gagagcacatcaacagaactgcccagtggtgcaacagaaggtgtggataccatcaatcac
tttccagccaagtttccaagtgatggcaactttccagagagagcaacggtctctcttcct
tccgtccatgcatcagtattcaaaaccgcttcaaataaggctatagaagtttccccagcc
cacctggagcgagccaagcatctgtttgaagaaaacaaagctgaaaggccctttagtgct
gagtcgactaaaagaggcagcggagctaaagaagaaattcacaccagtattgatccagtg
aaaaatacaatcgctgcctcaaagcagccaccgtcatcgagtgaaagatttggggagata
agttgtcagctaacggcgtcacagaaagctgacgtgacagcactgtgcactctcatggag
gaagcagatagccagtttgactttacacagttcaaaactgcaaagctacagcagcactgt
caagatgaggccacctccccacaaaaagcggacaaagaacttgaccctgatttttttatg
ggtattgatttcgatgacagctttagttccgatgctgaaaagcataaaatgacgtcagct
tccaactgtgaggcatcaactctgacaaatagatccacactgacaaaagaaactccctcc
actgaagatgcgtctccctcttcaaagagcatctctgacagaaggcgctgtattgtgtca
gctgaaccccaaaatcctaacagagctgggttcactgagacaagcgagcaggagaacaaa
acccctttgatgcctagtgtaggattcaaaactgcgagaggaagtgatttgagaatttca
aaagaacatttgagaaaagccagagccttgtttgcagatttaggggaaaatctgactgat
cagaagttgggagacaagctgagcagtgatgctgctgctaaaagcgagcagcgacagatc
accagcattacagatacaaatgctgcattgacttttaataacagaaaaatggaagcatct
tcgtatcaaagtgatttccaattgtccagtgggaagggggtttctatttcagcgaaagct
atgcaagaagcagattctctcttcaaagactgcgacattaccgacaataaacctgctgcg
tctgtaaaacatcaaaagaacaccgaacagtttcctacagtcagtcacacgaaaagcctt
ttgaaatttaaaggtatgcaaggattcaaagagaacttttctgaagaagcaatcggggaa
tgttcaaaagcgagtgctggaccagctgccagtcacacaaaggttgtacagcacaaatcg
actctaaaagcattttcttctcccttgtgctcgacatcaaagagttctggctcctctgga
atgaatcagtcgaacaatggcggaggattctctacagccagcgggaagaaagtctgcgtg
tcggctgatgcggtgagaaaagctgagcgtctgttaaatgaaagtcatgcacctgaggac
acaaagaaccaactgcaacaggaaggagatgctttaagaacagctcatgtggccgatcaa
attcaagttggaccaattaaaaatggagggtttcaaacagccagcggcaaaggagtcgtg
gtctcggccgcagctctcaagaaggctaaattgctcctgattcaatgtgaagcagtcgag
gatgaaatcgatgtaaaaccatctcactccaagacgccggttcgaggtcttgcatccagg
acaagtggatttcttgcagccagtgggaaacctgtgggactttcagctgaggccctccgg
aaggcaaaagctcttttcagtgacatcactctcagtgcagagctcccggctgtttcagac
acaaaggagactcaaggcaacgctgacaattcagacaaaacacactgtggtttcataact
gcagggggagcatcagggggcttgtctaagaaaaaaaagttcaaagcaaaaaacattttg
aaagaatttgataacggttctgattcggtagaatcgctgcaagaagcagaggctttcttt
gaagactgcgacaatatggacagagacaacggaaccatggttaagtatgagagcagtgta
gcacctgtgaggggaggcgacagtgagaaggaacaagatcaggggctgacagacacttct
gaagagcgtggaagtggacactcagtaaacaagaacggttttctgcatcccggggatgtg
aggacacttgaagacttgaccaatggaaacccatcaaagcatctttcaacccggttgtgc
acaacatcagagaaaactggcacctctgacttcaaaacatttagcagcggtggtgggttc
tgtacagccagtgggaaaaaagtgtgtgtgtcagatgatgcaatgaccaaagcaaagtca
ctgttgaatgaaagtgctttggttacggatacaaacaaaaatctgaaacaaaaagaagac
agtgggacgcctcagagtgtaaaaggagtcgctctttcatttgcagcccagaataaggta
aaaacaacaaataccaagttgctagtttcttgtgtaccacagaggaaagggggattcctt
gcagccagtggtaaaccggtggcattttcatatgaagccctccaaaaagcaaaagctctc
ttcagtgacatggatctcagtgcagagatcccgactgtttcaggcacaagaaagagcgac
aaacacgaagaggctcagaatagtgcaggaaaaataagttgtggtttctcaactgcaggg
ggagctaaagtcagcgtgtcagcgacaaatcttctgaatgcaaagaaccttttcaaagaa
ttggcagatgaagagactcctccctcggactcgtactcaagaagcccacgtgcccgcaag
tcagatctatcaaatatagaaaatgtggaaagaagtacagattgtactttcatgacagcg
aatgacaaggacatgtctgctgaggaaagtgtccctgaagtcgttgaatcttttccgtct
gtgctgactgaccctgaaaatgaaattctcagagaaaatgcccttaaaggtgcatctgag
gtaaaagaaggtaaaacgtccacatcatgggagagcaagctccacgacactcttagaaag
gaaacagcaaacgtgttgggttgtgaagttcaacgtacaaactgtggtgagggacccaat
tccaaaaggccggaggagtcttcatttcaaatgtttccatcacttcacttcagtggctgc
tctgagacccagcagaggtttctcgcccaggaagcgctcgactgcaccaaagctttgtta
gaggatgaaagtctctccgtgacatcagagaatgagccagtgcaagattacccaggatcc
aatgccacatctgcagaagaacagaaaggaagagggaaaagattgggagacaatgcaaat
atgactggtcagcctcccctgaaaagacgattactggaggaattcgatcggactgttgtt
ggtccgagaggtttaacactacagccactgaaaacttgtccagacagtgtaatgaaagac
aggagagctttcaagtttcaaacctctcctcatcctaatatcacacagccacacaggaac
ggaaaaaactatgtggaagccaaactgcaaaacacaacaccaacacaacagtgtacctca
ggaggaagcagatcagcgcattcaaacaagccagcgtttgctcctccattcctcaagaac
gcaaagatggagacctgcaaggatgcagtgctcaaagtcaacacaagaacacctcctgca
tttgttcctcctttcaaaaaacaaagaactattgtccaagagagttcctgtaaaccacag
cagcagcaggaggaggacaaacatcagcatctctttgtaacacccactaaccgcagcact
gtcttaccgcccactaagaaaacacaaagcagtacagatttagctggtaatacaaggaaa
ggagatattccacaggtggccttggccgacacaaagcatgattatctgactgataatcac
aatgttcccgttggcggtggttcaggggactctgctgcaaaggcaacacgtgaggacgac
acgttttccagaagccaagacatgtttcagaatcttgaaaatgtggagttggcacgggat
atgcaagacatgagaatcaggaaaaagaagcgacagacgatccgaccgttgcctggaagt
ttgtttctaaccaaaacctcgggggtttcaaggatcccattaaaagctgctgcaaatgga
aagctccctgggagatactcctcaaaacagctgtatggatatggagtgcatcaacatgtg
tccgacatcagcagcgagacagccgaggcttttcgcttcaatgtgcatcagttcctgaaa
ctggaagcgtttacagacggaggcggcgttcagctggccgatggaggatggctaatcccc
agcaaggatgggactgcaggaaaagaagagttttataaagccatgtgtgacactccaggt
gtggatcctaaactgatgagtgaggagtgggtgttcaatcacttcagatggatcgtgtgg
aaacaagcctccatggaaagatcttttccagaagcgatgggcggcctctgtctcacgcca
cagcaggttctccttcagctcaagtacagatatgatgtagagatcgaccacagccgtaga
cccgctctgaggaggatcatggaaaaggacgacacatcggccaagtccctggttctctgt
gtctgtggggtcgtctcccggggacactcctcaatcagaccaactcgcagtgacaccaag
actccacagggggccgatgccaaggtcgaatccccctttgcagtagtttggctgacggat
ggatggtacgccatcaaagctcagctggatgaacctttgactgccatgcttcacaaaggt
cgactggctgtcggcgggaagctgatcgtctacggggctcaacttgtgggatcccaagag
gcttgttctcctctggaggcaccggagtccctcatgttaaagatttgtgccaacagcacc
agacctgcacggtgggacaccaagctgggatttcacagagatccccggccgttcctgctg
cctgtctccagtttgtacagcaatggaggaccagtaggatgtgtggacattaccatactc
agaagctaccccatacagtggatggagaggaaaccagatgctggcgtcgtgtttcgttct
ggccgtgcagaagagaaagaggagagacgatacagcagccaaaaccaaaaggccatggag
attctttttgccaagattcaaactgaatttgaaaaagagcagacaggtaaaaacaaacct
caacgcagaagacgcacaataagtcgtcaggatattgcaaatctgcaagatggagaggag
ctgtatgaagcagtggaggatgatccagcttacttggaggcccatttgagtgagcagcag
atggagactgttcaaacctacagacgctctctgatggagaaggaacaggctgagctacag
gatcgataccgtcgtgctctagaagcagagagcggggacgggacctgtcccaaacgagac
gtcacacccgtgtggaaactctgcgttctggactctatgggcagaggcagtgtttaccag
ctgaatttttggcgaccctcctccgatcttcaggctttactgaaggaaggccgtcgatac
aaagtttataatctctccacttcagagggaaagaaacgcagcgggatcgaaacggttcaa
ctcactgggaccaagaaaacccagtttcaggacctgcaggcccaggaatggttatcagaa
cagtttcaacccagggtttccaccagtttcctgaatcttcaaaacccagagttccagccg
ctgtgtggagaagttgatctcacaggatttatcatcagtatcatggatggacagggttcc
tctccggcattttatctggctgatggagaactgaactttgttaaagtgcgctgtttcagc
agcttcgctcagtccggcctggaggatgttgtaaaaccacgtgtgctgttggctctgagc
aacctgcagctgagaggtcagtccctgtctcccactcctgttgtctacgctggagatctg
accgtcttctctacgaaccccaaggaggttcatctccaggaatccctcagccaactcaga
cacctgctccagggtcagcagaacttcttcctcactgctgaggagaaacttttacattta
ctcaagtccgatggtctaagatccatctcttctccagctgtccaccctctaaccccagct
ggtgcaactgacagaagacaagatacaaagaaaagcctgatcgctcagcagccaatcaga
agtgttggatccttcacccctgtcagcgggaatctgtctgcaccaacgtctttaacagag
aaagaccccaaaagcctgaagaggagaagagctctggactatctgtgtcgcatcccgtct
ccaccggctctctcccatctgggctcggtggtgactccttgtgtgaagaagacgttcaac
cctcctcggaggtcggagacaccgagcactttaaagacagaacagactccggctcgcaaa
cctgttgtctcaccgaaggaagacgaatgggtgaacgacgaggagctggcgatgattgac
actcagaacttgggtgttggtgatttaatgtag
DBGET
integrated database retrieval system
