Pleuronectes platessa (European plaice): 128440295
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Entry
128440295 CDS
T09923
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04137
Mitophagy - animal
pplt04140
Autophagy - animal
pplt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128440295 (hif1al)
04137 Mitophagy - animal
128440295 (hif1al)
04148 Efferocytosis
128440295 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128440295 (hif1al)
Transcription factors [BR:
pplt03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128440295 (hif1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1
PAS
PAS_9
PAS_4
CENP-B_dimeris
Radial_spoke
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
128440295
NCBI-ProteinID:
XP_053278939
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All DBs
Position
5:2094929..2107282
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AA seq
673 aa
AA seq
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METKEESVTVKRGSTEQRKLRSRDAARCRRSQETEVFYELARSLPLPRRVSTHLDKAAIM
RVALSFLRMHGLLRPGENQKEEPEEEESDDREEEEEEEEEEEDPMDAFYPQTLAGFIMVM
TEEGDMIYLTENVSKHIGITQLELLGQSVYDLVHPCDQEELRDLLGPRPGSNKKEQKHHS
ERNFFLRMKSTLTSRGRTVNIKSATWKVLHCTGHMGPHGGSSTSPPAARVMTLLCEPIPH
PSSVDFPLDTCTFLTRHSMDLRFTHCEGRVTELTGYKPEDLIGRSAYEFHHALDSDHVTK
SLHTLLLKGQVSTSHYRFLANSGGFVWAETQATVLYSGKTSQPEAVVCLNFILSSVEQPD
VIFSSEQTRSGLQPEAEPDSPPLTPEDCGTPDVCDTDVQNRTNCSEAEDTGSNPSSAMEL
FLKPQEKPEEPLQTSEDDTDAVAPLTGGFVELSFVSPLSPDLLPDHPQDLCTPELRQLLT
PIFNPITPPSSSSPASSLDVSLSEDEVMDASEVQRFFAIWPDNGQKKEKTVENMEGMDLD
MLAPYISMDDDFQLSVSSGLTEEVDEPSAVTPAASLRRKRTHNRGEELLSQLRIQDKRQK
QTAPSTEEELFLSHRLLDCLDQSDLSLDLGPGARSPLLTDRDPVLGGVQGLCETEALMRD
IFEPRPPDLSPLT
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggagacgaaggaggagagcgtcacagtgaagaggggcagcacggagcagaggaagctg
cgctctcgtgatgcagccagatgtcgccgcagtcaggagaccgaggtgttctacgagctg
gcccgctctctgccgctcccccgcagggtgtccacccacctggacaaggcagccatcatg
agggtcgccctcagcttcctgcgcatgcacggcctcctgcgacccggtgagaatcagaaa
gaggagcctgaagaggaagagagcgacgacagggaggaagaggaggaagaggaggaagag
gaggaagatccaatggacgctttctatcctcagacgttggctggtttcatcatggtgatg
acggaggaaggggacatgatctacttgacagagaacgtcagcaaacacatcggcatcaca
cagctggagctgctgggtcagagtgtttatgacttagttcatccgtgtgaccaggaggag
ctcagagatctgctgggtccacgtccaggttcaaataagaaagaacagaaacatcacagc
gagagaaacttcttcctgcgaatgaaaagcacactgaccagcagggggcgcacagtcaac
atcaagtctgccacatggaaggttcttcactgcacaggtcacatgggtccacatggtggc
agctccacgtcgccccctgcagccagagtgatgaccctgctgtgtgagcccatccctcac
ccatccagcgtggacttccctctggacacgtgcaccttcctcacccgccacagcatggac
ctgcgcttcactcactgcgagggcagggttacagagttgacgggatacaaacctgaagat
ctgattggccgctcggcctacgagttccatcacgcgctcgactccgatcacgtgaccaaa
agcctgcacacattgttgctcaaaggtcaggtcagcaccagtcactaccgcttcctggca
aacagcggcggcttcgtctgggccgagactcaggcgactgttctctacagcggcaagacg
tcgcagccagaggccgtcgtctgcctcaacttcatcctcagttctgtggagcagccagac
gtcatcttctcctctgagcagacacgttctggtctgcagcccgaagcggagcccgactca
ccgccgctcacaccagaggattgtgggacgcccgacgtctgtgacactgacgttcaaaat
cgaaccaactgcagtgaggctgaggacacaggttcgaatcccagcagtgctatggagctg
ttcttaaaaccgcaggagaagccagaggagccgctccagacgagtgaggacgacacagac
gccgtcgcaccactgacgggaggttttgtggagctgtcgttcgtcagcccgctcagcccg
gacctgctgcccgaccaccctcaggatctgtgcacgccggagctgagacagctcctcaca
cccatcttcaaccccatcacacctccctcctcatcatcaccagcctcctcactggatgtg
agtctcagtgaggacgaggtgatggatgcgagcgaggtgcagaggttctttgccatttgg
ccggacaatggtcaaaagaaagaaaagacagtggagaacatggaggggatggatctggac
atgttggctccgtacatctcgatggacgatgacttccagctgagcgtctccagtggtttg
acggaggaagtcgatgaaccttcagctgtgactcctgcagcctcactcagaaggaaacgg
acccataaccgaggggaggagcttctgtctcagctgaggattcaggacaagagacagaaa
caaactgctccgtcaactgaagaggaacttttcctcagtcacagattactggactgtctg
gaccaatcagatctgagcttggacctgggcccaggagctcggagtccgctcctcacagac
agagaccctgtcttaggaggcgttcaggggctttgtgaaactgaagctctgatgagggac
atattcgaacctcgccctcccgacctgtcgcccttgacctga
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