Pleuronectes platessa (European plaice): 128440373
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Entry
128440373 CDS
T09923
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128440373 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128440373 (dhx36)
03012 Translation factors [BR:
pplt03012
]
128440373 (dhx36)
Enzymes [BR:
pplt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128440373 (dhx36)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
128440373 (dhx36)
Translation factors [BR:
pplt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
128440373 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
T2SSE
ATPase
AAA_19
AAA_16
NB-ARC
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
128440373
NCBI-ProteinID:
XP_053279032
LinkDB
All DBs
Position
5:9702147..9722836
Genome browser
AA seq
1089 aa
AA seq
DB search
MSYGYGGGGGGGGRRGRRGGRGHRDGSRERWDRDGGGGGGGFRGSRSDSGQGRGRGGGGG
EEGEEGGQRDRPPPHLKGREIGMWYARYGAVRRKQADRRSRPVVQMDEAREQHITKLLNS
VQYDHPGQERGSRGAGASTSGNRQTDADRSSHCYFDGELPKEVKKERDSTSEEEEEEEGS
SGQKKAANKKHRNLAPAVVKDEIPDTWDDDEPQEEEEKEEKEKLRPRDKDVEFLFQEKVR
NSSLDEFLQRDLQIKRSDPKYKEMLKFREKLPSYRKREELVELINSSRVLVVSGETGCGK
TTQVTQFILDDYIDRGVGSMCRVVCTQPRRISAISVAERVSAERAESVGNGNSAGYQIRL
QSRLPRKQGSILYCTTGIILQWLHSDPLLSSISHLVLDEIHERNLQSDVLLVIVKDLLAR
RDDLKVILMSATLNAEKFSKYFDNCPMVHIPGSTFPVEEFLLEDIIEMTSYRPQNQDRRP
SWKKGFWQGQNSRPEKEEKEAEYKDSWPCYQRTLQNRYSENTISTVEMLDGNDKIDLELI
LTLIRHIVLNDEEGAILVFLPGWDDISKLNDLLMAQQMFKSDRFVIIPLHSLMPTVNQTQ
VFKRPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETNFDTNNNISTMTAEWVSLAN
AKQRKGRAGRVCPGKCYHLYNGLRASLLDAYQLPEIMRTPLEELCLQIKILKLGSIARFL
EKAPDPPTERAISLAIKNLVDLNALDHSENLTSLGFHLARLPVEPHIGKLILFGALLGCL
DPVLTIAASLSFKDPFFIPLGKEKMADMRRKTLSRNSKSDHLTIVNAFQGWDEAKRRGFR
YEKDFCWDNFLSANTLQMLHNMKGQFAEHLVHAGFVSSKDPRDPKSNVNSDNEKLIKAVI
AAGLYPKVAKIRPSHSKKRPGVKVYTQADGKVNIHPKSVNAEETEFNYKWLVYHLKMRTS
SIFLYDCTEVSPFSLLFFGGDITIQMDEGQETIAVDQWIVFNSPARIAHLVKSLKKELDS
LLEEKIRNPAPVDWQNRQSKDCAVISAIIDLITTQETPIGGAKSYSRPWASAPRGPRIQF
NDDDDDDDD
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggatacggtggtggaggtggtggtggtggaaggagaggccgaagaggaggt
cgagggcaccgggacgggagcagagaaaggtgggacagagatggaggaggaggaggagga
ggtttcagaggatccagatctgactctggccaggggcgaggaagaggaggaggaggagga
gaagaaggagaagaaggtggccaacgggaccgtcctcctccccatctgaagggccgggag
atcgggatgtggtacgcgagatacggagccgtaaggaggaaacaggccgacaggagatcg
cgacccgtggtccagatggatgaagccagagagcagcacattaccaagctgctaaattct
gtccagtatgaccaccctggtcaggagagaggcagcaggggagcaggagcctctacgtct
ggtaataggcaaacagatgccgacagaagtagtcactgttactttgatggagaattgccc
aaagaggtgaaaaaggagagagattccacatctgaggaggaggaagaagaagaaggtagt
tcgggccagaaaaaagcagctaacaagaaacatcgtaacttagctccagcagtcgttaaa
gatgaaattccagacacatgggatgatgacgagccccaggaagaggaggagaaggaggag
aaagagaaactgagacccagagacaaggatgtagaattcttattccaagaaaaagtcaga
aatagttcactggacgaattcttacagagagatctgcagatcaagagatcagatccaaag
tacaaagaaatgctgaaattcagggaaaaactaccttcttatcggaaaagagaggaactg
gtggagctgatcaactctagccgtgtcctggttgtgagtggggagactgggtgtggaaag
accacgcaagtcacccaattcatcctggacgactacatcgacagaggcgtgggatcgatg
tgccgggtcgtgtgcacgcagcctcgtcgcatcagtgccatctctgtagcagagcgtgta
tcagcagagagggctgaaagtgtagggaatggaaattcagctggttaccaaatccgccta
caaagccggttaccacggaaacaaggttcgatcctgtactgtacaactggaattattctt
cagtggcttcactcagaccccttgttgtccagtatcagtcacctggtgcttgacgagatc
cacgagaggaacctgcagtcagacgttttgctcgtcatcgtgaaggacctgctcgcccgc
cgggatgatctcaaggtcatcctcatgagtgccacgctcaacgcagagaagttctccaaa
tacttcgacaactgtccaatggttcacatccctggttcgactttcccagtggaagagttc
ctacttgaggacattatagagatgaccagctaccgcccccagaatcaggaccgtcggccc
tcatggaagaaaggcttttggcaggggcagaactccagacctgagaaggaggagaaagag
gcagaatacaaggacagttggccttgctatcaacgcacactgcagaacagatactctgaa
aacacgatttctacggtagagatgttggacggtaatgacaagatcgacctggagcttatc
ttgacactgatccgtcacattgtgctcaatgatgaggaaggagcgatcctggttttcctc
ccgggctgggacgacatcagcaaactcaatgacctgctcatggctcagcagatgttcaaa
tcagaccggttcgttatcatccccctgcactccctcatgcccaccgtaaatcagacgcag
gtgttcaaaaggcctcctcctggagttagaaagatagtgattgccaccaacatagcagag
accagcatcaccatagatgatgttgtatatgtgatcgatggaggaaagatcaaggagacc
aactttgacaccaacaacaacatcagcaccatgacggccgagtgggtcagcttggcaaac
gccaagcagaggaaaggacgcgccggcagagtgtgcccggggaagtgctatcatctgtac
aacggtctcagggccagcctgctggacgcctatcaattacccgaaattatgaggacaccg
ctggaggagctgtgcctgcagattaagatattgaagcttgggtctatagctcgattcctg
gagaaagcccctgacccacccactgagagggccatcagtctggccatcaagaacctcgta
gacttgaatgccctggaccactcagagaatctgacatcgctgggtttccacctggctcgt
ctgcccgtggagcctcacatcggcaaactgatcctgttcggagctctgctgggctgcctc
gaccccgtgctcaccatcgccgcctcgctcagcttcaaagaccctttcttcatccccctg
ggtaaagagaagatggctgacatgaggagaaagaccctgtccagaaactcaaagagtgac
cacctcaccattgtcaacgcctttcagggctgggatgaggccaagcgccgcggtttcagg
tatgagaaggacttctgctgggacaacttcctgtcagccaacactcttcagatgctgcac
aacatgaagggtcagtttgctgagcatctggtgcatgcaggctttgtcagcagcaaggac
cccagagaccccaaatctaatgtcaactcggacaatgagaagttaatcaaagcggtgatt
gccgcaggtctgtacccgaaggtggccaagatcagaccatcgcacagcaaaaagaggcca
ggggttaaggtctacacccaggctgatggaaaggtgaacatccacccgaagtcggtcaat
gccgaagagacagagttcaactacaagtggctcgtctaccacctcaagatgagaacgagc
agcatcttcctgtacgactgcacagaagtgtccccgttctcgctgctgtttttcggaggc
gacatcaccatccagatggacgagggccaggagaccatcgctgtggaccagtggatcgtc
ttcaattccccggcacgcatcgctcacctcgtcaagagtttaaagaaggagttggattcc
ctcctggaggagaaaatccgtaaccccgctcctgtggactggcagaaccgtcagtccaaa
gactgcgctgtcatctcggccatcatagatctcatcaccacccaggagacgcctataggt
ggcgctaagagctatagcaggccgtgggcgtcggcccctagagggccacgtattcaattc
aatgacgatgacgacgacgacgatgattag
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