Pleuronectes platessa (European plaice): 128440416
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Entry
128440416 CDS
T09923
Name
(RefSeq) LOW QUALITY PROTEIN: F-box only protein 40
KO
K10315
F-box protein 40
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128440416
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128440416
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
128440416
NCBI-ProteinID:
XP_053279087
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Position
5:complement(3900596..3905012)
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AA seq
706 aa
AA seq
DB search
MSRHGAEVIRDVLDCEVDKHRGTKDHHSCLLVRSKSMPVGRHEHCDRCYSVHCRAPEQSS
VSCMVIKCRKSCGAVLHKCKQEEHQLLCPNEAVPCLNAHYGCPFTMLRHRLAEHLEVCPA
SVVCCSQEWSRWPLSETDLTCRNLSEDLEPEQHLDVAVALRDQELLFRSIKMKNVFPELM
MEDLQDATSGVNCPAEEAACSSDQGKSTESRCTRMEVEELGQKEKALPKSRDVENIHNFG
SWEKIFTKEMGGCKETVKNLNRKEAKENEQRESSNCQGEARNSHLNRENAAAVAASSSDG
ATXFAPWQDGVLERLGREVNKVEYNMYLRENGAMLINFGQLAACTPRDKDFVYGKLEPIA
VQTVRSFRVPTSFRAKRVHTDKVHKARHVHQSVDTADLGVRVDELPKSDEISATLLCFLE
KEVRGHLISETKGVDGLYVNVGTQTYDFRSAPFKAGASLADVVADKPPGLYIHVEAESVT
RRHNRRNSAFTHMCGHFFRRDEYRSHFRNVHSDIQASLGGWLQQRCPLAYLGCTFAQTRP
AGPXHRDVSAFLLQPLVPSSLCEGGKTLNPRRDGARDLDPLSRLPPEVLQQVAGYLDSFT
LSQLSQASRLMRELCATLLQARGMVSLKWEKKTYSHGGSAWRCRKKVWEFSSGFSSVDRW
SFSSVASMSDHLKTCSFYQREERTEPVVLAGLREVREKHGEVKQQR
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtccagacacggtgcagaggttataagagatgtcctggactgcgaggtggacaagcac
cgaggaacaaaggatcatcacagctgtctgttggtgaggagcaaatcgatgccagtgggg
cgtcatgaacattgtgacagatgctacagcgtccactgccgagccccggagcaaagctcc
gtctcctgcatggtcatcaagtgtcgtaagagctgcggcgccgtcctgcacaagtgcaag
caagaggagcatcagctcctctgtcccaacgaggccgtcccctgcctcaacgcccactac
ggctgcccgttcaccatgctgcgccacaggctggccgagcacctggaggtctgtccggcc
agcgtggtgtgctgctcccaggagtggagccgctggcctctctctgaaaccgacctgacc
tgcaggaatctctctgaagaccttgaacctgagcagcatctggatgtcgcggtggctctg
agggaccaagagctgctgtttcgatccataaaaatgaagaatgtttttcccgagctgatg
atggaggacctccaggatgctacatctggggtcaactgccctgcagaggaggcagcctgt
tcttcagatcaaggcaaatctacagagagtcgctgcacgaggatggaggtggaagaactc
ggccaaaaggagaaggctctgccaaagagcagagacgtagagaatattcacaactttggc
tcctgggagaaaatattcacaaaggagatgggaggatgcaaggaaactgtcaagaacctc
aacaggaaggaagcaaaagagaacgagcagcgagaatcctcaaactgtcagggagaggcg
agaaactcacacctgaaccgggagaacgctgctgctgttgctgcttcgagcagtgatggt
gcaactngcttcgctccgtggcaggacggggtcctggagaggttaggccgagaagtcaac
aaggtagagtataacatgtacctgcgggagaacggggcgatgctgattaacttcggacaa
cttgcagcttgcacgccgagagacaaggattttgtttacgggaagctggagcccatcgcg
gtccaaaccgtccgctcgttcagagtccccaccagcttccgagcaaagcgcgtccacaca
gacaaggtgcacaaagccaggcacgtgcaccagagtgtcgacaccgcggatttgggcgtg
cgggtcgacgagcttccgaagagcgacgagattagcgccacgctcctctgcttcctggag
aaggaggtgagaggacacctgatctcagagactaaaggtgtagacggcctctatgtgaac
gtgggaacacaaacgtacgacttccgctcggctccgttcaaagccggtgcgtccctggcg
gacgtggtggcggacaaacctcccggcctttacattcacgtcgaggccgaatccgtcacg
aggagacacaacagaagaaactcggccttcacccacatgtgcggccacttcttccgccgc
gatgaataccgctctcacttcaggaacgtgcactccgacatacaggcctctctcggcggc
tggcttcaacagcgctgccccttggcatacctcggctgcactttcgcccaaacaaggcct
gcaggccccnngcaccgagatgtcagcgccttcctgctccagccgctggtgccctcgtcc
ctctgcgaaggcgggaaaaccttgaacccccggagagacggtgcacgtgatctggatccg
ctgagccggctgcccccggaggtcctgcagcaggtcgccggttacctcgacagcttcact
ttatctcagctgtcccaggcctcgcggctgatgagggagctgtgtgccacgctgctgcag
gccagagggatggtctccctcaagtgggagaagaagacgtattcccacgggggaagcgcc
tggagatgccgaaagaaagtctgggagttcagctctgggttttcctctgtggacagatgg
agcttcagcagcgttgcctccatgtcagatcacctgaagacctgctccttctaccagagg
gaggaacgcaccgagccggtggtgttagccggcctgcgtgaggtcagagagaaacacgga
gaagtgaagcagcagagatga
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