Pleuronectes platessa (European plaice): 128440464
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Entry
128440464 CDS
T09923
Symbol
robo1
Name
(RefSeq) LOW QUALITY PROTEIN: roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128440464 (robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pplt04515
]
128440464 (robo1)
Cell adhesion molecules [BR:
pplt04515
]
Immunoglobulin superfamily
ROBO family
128440464 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_VEGFR-1-like_5th
C2-set_2
Pur_ac_phosph_N
Ig_5
FN3_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
128440464
NCBI-ProteinID:
XP_053279167
LinkDB
All DBs
Position
5:complement(6440321..6487786)
Genome browser
AA seq
1574 aa
AA seq
DB search
MPSVPLAVFTTRHGSLAGPDEKTYDRLNKHRHSMASLSARLCSRAFLYVSPFCFLAVLRD
DFRQNPADVIVAAGEPAVLECMPPRGHPEPTISWKKDAVNIDDRDERITIRGGKLMITNA
RKSDAGKYVCVGTNMVGERESEIAELTVLERPSFVRRPGSQVVLVDQSVEFRCEARGDPV
PTVRWRKDDGDLPKARYEIREDHTLKIRRLTSADVGSYTCVAENLVGKAEASATLTVHVF
SLPPAFVVRPRNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSSQPPQPSSRFSV
TQTGDLTITDAERSDVGYYSCQALNIAGSVITKALLEVTDVVSDRPPPVIRQGPTNQTVA
VDGTVVLNCMASSNPTPTILWRKDGVLVSTHDSRVKQLDTGALQIRYAKLGDTGTYTCIA
STPSGEASWKAYLEVHEFGVSIQPNRPTDPNLIPSAPSRPEVTDVTRTSVTLSWKPNLNA
GATPTSYIIEAFSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLFLVRAANAYGLSDPSP
ITEAVKTQDIPPTSQGVDHRQIQRELGDVLIHLHNPTILSSSSVRVQWTVEQQSQYIQGY
KVMYRPSPEGLQRSEWAVFEVRTPGEDSAVVPQLRKGVTYEFKLRPFFNEFQGTDSDVKI
GKTLEEAPGAPPREVTVTESGDNGTAIVVSWQPPPEEEQNGVVQEYKIWCLGNETRYHIN
RTVDGSTLSVLIPSLAPGIRYSVEVAASTGAGPGVKSDTTVFQLDASGRMTDADAPENPL
SQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFTPT
VAYQRGGEGVSSAGRPGLLNIGESATQPWLADTWPNSCSNHNDCSMNCCTAGNGNSDSNL
ATYSRPADCIANYNNQMENKQTNLLVPESGVYGDVDLSNKINEMKTFNSPNLKDGRFVGP
GGQPTPYATTQLIQSSIMGNNINSDRGPGGIGGGPGGGGELNEKHCWKPTPVQQQQQKQE
MGSQLQYIIMEQNKLNKDRYRGGDSPMPATIPYNQTHDSHTGGSYNSSDRGSSSTSGSQG
QKKGMRTPKLPKQSTMNWADLLPPPPANPPPSRSMEEYSLPMEESCDPDMQCPMPPSHMY
LQPHELEEEEEEMERGPTPPIRGAASSPAAVSYSHQSTATLTPSPQEEMRPMLQDAADSH
ERRRRGVSPPAPQRPLSPSHTYGYNCSPLALDTDGMEEDDILEEEEEEEDDTDAEVAKMH
YHHTHPHTHTHPHHPQMHPRRLLLRGLEQTPASSMGDLESSVTGSMINGWGSASEEDNVS
SGRSSAVSSSDGSFFTDADFAQAVAAAAEYSGVRVAKYPNXTRPGGWRSHRPGSPVSTDS
NMSMAAVHRRPPKKQKQPPAVHPGNQRRDPYNEDLPPPPIPPPAGLKSPTHPSKAALEGR
GVVSPKTGEGRDKRGATGGYRPREGSDPRTSSSERKEAQERQKTSHGEKGNRHESSTASK
ARQHAGPEDILPYNRPQFPTVNSTRDPSSSSSMSSRGSGGRRRGEGGRRNQADMGLITTG
ALQPGDEELEMAES
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgtgcctttggccgtgttcaccacacgccatggctccctcgccgggcctgac
gagaagacgtatgaccgtttaaacaaacacaggcactcaatggcctctctgtctgcgcgg
ctgtgcagcagggctttcctttatgtgtcccctttctgttttcttgcagttctacgagac
gactttagacaaaaccctgcagatgtgatcgtggcggccggagagccagcggtgctggag
tgcatgcccccacgtggacatcctgaacccaccatctcctggaagaaagatgccgtgaac
atcgacgaccgagacgagaggatcactatacgcggcgggaagctgatgatcacaaacgcc
cggaagagtgacgctgggaagtacgtgtgtgtcggcacaaacatggtcggagaacgtgaa
agcgagatagctgaacttacagtgctcgagcggcccagctttgtgcgtcgccccggcagc
caggtggtgttagtggaccagagcgtggagttccggtgtgaggcccgtggtgacccagtt
cccaccgtgcgctggaggaaagacgacggtgacctgcccaaagcaagatatgagattcgc
gaggaccacaccctgaagatccgtcgtctgacctcggctgatgtgggctcctacacctgc
gtggccgagaacctggtgggcaaggcggaagcctcggccacgctcaccgtccacgttttt
tccttgcccccggcatttgtggtgagaccaaggaaccaggtggttggggttggcagaacc
gtgactttccagtgcgaggccactggaaacccgcagccggccattttctggcagcgggaa
ggcagtcagaacctgctcttctcctcccagcctcctcagccctccagccgattctctgta
acccagactggggatctgacgatcactgacgccgagcgctcagacgtgggatattacagc
tgccaggccctcaacatcgctggcagtgtcatcaccaaagctctgctggaggtcaccgat
gttgtgtcggaccgcccgccgccggtcatccgccaaggcccgaccaatcagacggtggcc
gtggacggcacggtggttctcaactgtatggcatcgagtaaccccacacccaccatcctc
tggaggaaggatggagtactggtgtccactcacgactccagggtcaaacagctggacacc
ggtgctctgcagatccgctacgcaaagctcggtgacactggcacctacacctgcatcgcc
tccacccccagcggcgaggcctcgtggaaagcttatttagaggttcacgagtttggagtt
tcaatccagccaaacagacccactgaccccaacctgatccccagtgccccgtccagacct
gaggtcaccgacgtcacccgcacctccgtcaccctctcctggaagcccaaccttaacgcc
ggggccacgcccacctcctacataatagaggccttcagtcatgcatcagggagcagctgg
cagaccttggcggagcatgtgaaaactgagtcatttgtactgaagggcctgaagcccagc
gcagtctacctcttcttagtgcgggcagccaatgcctacgggctgagtgatcccagcccc
atcactgaagctgtgaaaacccaagacatcccccccaccagtcagggtgtggaccaccgt
cagatccagagggagctgggggacgtgctgatccacctgcacaaccccaccatcctctcc
tcctcgtctgtcagggtgcagtggacagtggagcagcagtctcagtacatccagggctac
aaggtgatgtacaggccgtcaccggaggggctgcagaggagcgagtgggccgtgttcgag
gtgcgcacgcccggggaggacagcgccgtggtgccacagctccggaagggagtcacatat
gaattcaaactccgccccttcttcaatgaattccagggaacagacagcgatgtgaaaatt
ggcaagacgctggaggaagcccccggcgccccccctcgtgaggttacagtgacggagagt
ggggacaatgggaccgccatcgtggtctcctggcaaccccctccggaagaggaacagaat
ggggtggtccaggagtacaagatttggtgtttggggaacgagactcggtaccacatcaac
cgtacagtcgacggctcaaccttatccgtgctgatccccagtctggccccggggatccgc
tacagcgtggaggtggcggccagcaccggggcgggtcctggggtcaagagcgacaccacc
gtcttccagctcgatgcttctgggcggatgacggacgccgacgccccagagaaccccctg
tcccagcagatctccgacgtggtcaagcagccggccttcatagccggcatcggagccgcc
tgctggatcatcctcatggtcttcagcatctggttgtaccgacaccgcaagaagaggaac
ggcctctccagcagctacgcaggcatccgcaaagtgccgtcctttactttcacaccaacc
gtggcatatcagagaggtggagaaggtgtgagcagcgccggaaggcctggtttgctgaac
atcggggaatctgccactcagccctggctggcggacacgtggcccaactcctgctccaac
cacaacgactgcagcatgaactgctgcacggctggcaacgggaacagtgacagtaacttg
gccacgtacagccgaccagccgactgcatcgccaattataacaaccagatggaaaacaag
cagaccaacctcctggtgccggagtcgggagtctacggggatgtggacctgtccaacaag
atcaatgagatgaagaccttcaacagccccaacctgaaagacggacgctttgtgggtccg
gggggccagccgacgccttacgccaccacccagctcatccagtcctccatcatgggcaac
aatataaactcggacagaggccccggagggatcggaggtgggcccgggggcggaggggag
ctgaacgagaagcactgctggaagcccaccccggtccagcagcagcagcagaagcaggaa
atgggctcgcagctgcagtacatcatcatggagcaaaacaagctgaacaaggaccgctac
agaggaggagacagtcctatgccggccaccatcccctacaaccagacccatgacagccac
actgggggctcctacaacagctccgaccgaggcagcagtagtacctccggcagccagggc
cagaagaagggaatgcgcacccccaaactacccaaacagagcacaatgaactgggctgac
ctgctgccccctccccctgctaacccaccccccagtcggagcatggaggagtactctcta
ccgatggaagaaagctgtgacccagacatgcagtgccccatgcccccctcgcacatgtac
ctgcagcctcacgagctggaggaggaggaagaggagatggagaggggccccactcctccc
atccggggggcggcatcttccccggctgccgtgtcttacagccaccagtccacggccacg
ctcaccccctcgccccaggaggagatgcggccgatgctccaggacgcggccgacagccac
gaacgcaggcgccgtggtgtaagccccccagcgcctcaaagacccctctccccttcacac
acatatgggtacaactgcagcccgcttgccttggacacggacggcatggaggaggacgac
atactggaggaagaggaagaggaggaggacgacacagatgcagaggtggccaagatgcac
taccaccacacccacccccacacacacacacaccctcaccacccccaaatgcacccgcga
aggctgctgctacgggggctcgaacagacgccggcgtccagcatgggcgacctagagagt
tcagtgaccggctctatgatcaacggatgggggtcggcctctgaagaggataatgtctct
tcggggaggtctagtgcagtcagctcttcagacggatccttcttcactgatgctgacttt
gcccaggcggtcgctgcagctgcagagtattcaggcgtccgagtggccaagtaccccaac
nacacacggccaggaggttggaggagccaccgtccaggcagcccggtgtccacagacagt
aacatgagtatggccgcggttcacaggaggcctcctaaaaagcagaagcagcctcctgca
gtccatccaggcaaccagagacgtgatccctacaatgaagatctcccccctcctcccatc
cctcctccagcagggctcaagtcccccacacatccctccaaggcagcactggagggccgg
ggggtggtgtcccccaaaacaggcgagggtcgagacaagcgaggagcgacgggaggctac
cggccccgagagggttcggaccccagaaccagctcctctgaacgcaaggaggctcaggag
agacagaagacttctcacggagagaaagggaatagacacgagagtagcactgccagcaag
gcacgccaacatgcaggtccagaggacattctgccctacaacagaccccagttccccaca
gtcaacagcacccgagacccgagctcctccagctccatgtcctctcggggctcagggggc
cggcggagaggagagggaggccgcaggaaccaagcagacatgggcctcatcaccacgggg
gccttacaaccaggagatgaagagctagagatggcagagagctga
DBGET
integrated database retrieval system
