Pleuronectes platessa (European plaice): 128440693
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Entry
128440693 CDS
T09923
Symbol
ercc2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03022
Basal transcription factors
pplt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128440693 (ercc2)
09124 Replication and repair
03420 Nucleotide excision repair
128440693 (ercc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pplt03021
]
128440693 (ercc2)
03036 Chromosome and associated proteins [BR:
pplt03036
]
128440693 (ercc2)
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128440693 (ercc2)
Enzymes [BR:
pplt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
128440693 (ercc2)
Transcription machinery [BR:
pplt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128440693 (ercc2)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128440693 (ercc2)
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128440693 (ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
SesA
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
128440693
NCBI-ProteinID:
XP_053279462
LinkDB
All DBs
Position
5:2242443..2249626
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNIEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ
RAFPLEVTKLIYCSRTVPEIEKVVEELRKLIEYYCKETGESNNFLALALSSRKNLCIHPE
VSALRFGKEVDGRCHSLTASYIRAQRHSDPELPACRFYEEFDAVGRQVPLPPGVYNLDDL
KDFGKRKGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELCKKSIVVFDEAHNID
NVCIDAMSVNITRRTLDRCQTNVDTLQTTIEKIKETDTAKLREEYRRLVEGLKNANVARE
TDVYLSNPVLPDEILKEAVPGSIRTAEHFVGFLRRFLEYLKSRLRVQHVVQESAPQFLKD
IFDKVCIDRKPLRFCAERLQSLLRTLEIADIADFSAVTLISNFATLVSTYSQGFTIIIEP
FEDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVVITSGTLSPLDIYPKILDFRPVTVAS
FTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFV
SYMYMENIVASWYEQGILENIQRNKLIFIETQDAAETSMALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIKENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHISDGSLNLTVDEAVNLSKHF
LRQMAQPFRQEDQLGLSLLTFEQLQSEEMLKKISQIAHQT
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacatcgagggtctgctggtgtattttccatatgactacatttaccctgag
cagtactcctacatgctggagctgaagaggactctggacgctaagggtcatggagtcctg
gagatgccgtcaggaacagggaagacgatctctctgctgtcgctcatcgtcgcctatcaa
agagcctttcctttggaagtgaccaaattaatttactgctccagaacagttccagagatc
gagaaggtggtggaggagctgaggaaactgatcgagtattattgcaaggaaactggagaa
agcaacaacttcctggctctggctctttcctccaggaagaacctctgcatccacccggag
gtgagtgctctgcgcttcggtaaggaggtggacgggaggtgccacagtctgacggcctcg
tacatccgggctcaacgccacagcgaccccgagctgcccgcctgtcgcttctatgaggag
ttcgatgccgtcggccgacaggtgcctcttccgcctggcgtctacaacctggacgacctg
aaggactttggcaagaggaaaggctggtgcccgtattatctggctcgatactcaatcctg
cacgccaacatcgtggtgtacagctaccactacctgctggacccgaagatcgccgacctc
gtgtccaaggaactctgcaagaaatctattgtggtgtttgatgaggctcataatatcgac
aacgtgtgtatcgacgccatgagtgtgaacatcaccagacgcacactcgaccgctgccag
accaacgtggacacgctgcagacgaccattgagaagatcaaggagacggacacggccaag
ctgagggaggagtacaggcgcctggtggaggggctgaagaacgccaacgtggcccgggag
accgacgtctacctctcaaatccagtgttaccagatgaaattcttaaagaggcagttcct
gggtctattcgcacagccgagcactttgtgggattcttgaggcgtttcctggaatatctg
aagtcccgtctgagggtccagcacgtggtccaggagagcgccccccagttcctcaaagac
atcttcgacaaagtctgcatcgaccggaaacctctgaggttctgtgcagagcggctgcag
tcgttgttacgaactctggagatcgcagacatcgccgacttctcagctgtgactctcatc
tctaactttgctaccctggtcagcacctacagccaaggtttcaccatcatcatcgagccg
tttgaggacagaactccgaccatcgcaaaccctgttctgcacttcagctgcatggatccg
tctatagccatcaaacctgtttttcagaggtttcagtcggtcgtcatcacctcagggact
ctctctccactggacatctatcccaaaatcctggacttccgccctgttactgtggcgtcc
ttcaccatgacactagcacggacctgcctctgtcccctgatcgttggaagaggaaacgac
caggtggccctgagctccaagtttgagaccagagaagactttgctgtgattcgtaactat
ggcaacctgcttcttgagatgtcggccattgtccccgacggcatcgtggcgtttttcgtg
agctacatgtatatggagaatatagtggcatcttggtatgaacagggaatcctcgagaac
atccagagaaacaaactcatcttcatcgagactcaggatgcagcagagaccagcatggcc
ctggagaaataccaggaggcttgtgagaacggccgaggagccatcctcctgtcggtggcc
agaggaaaagtgtctgagggaatcgactttgttcaccactttggtcgggcggtcatcatg
tttggagttccttatgtttacacccagagccgcattctaaaggctcgactggaatacctt
cgggatcagtttcagatcaaagagaacgacttcctgacgttcgatgccatgcggcacgca
gctcagtgtgtgggcagagccatcagaggcaagaccgactacggactcatgatcttcgct
gacaaacgttacgcccgagcagacaaacgtgggaagctccctcgctggattcaggagcac
atcagcgacggcagtctgaacctcacggtggacgaggccgtcaatctctcaaagcacttc
ctccggcagatggctcagcctttcagacaggaggaccagctgggtctgtctctgttgact
ttcgagcagctgcagtctgaggagatgctgaagaaaatcagtcagatcgctcatcagact
tag
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integrated database retrieval system
