KEGG   Pleuronectes platessa (European plaice): 128440709
Entry
128440709         CDS       T09923                                 
Name
(RefSeq) high mobility group-T protein
  KO
K10802  high mobility group protein B1
Organism
pplt  Pleuronectes platessa (European plaice)
Pathway
pplt03410  Base excision repair
pplt04140  Autophagy - animal
pplt04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128440709
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    128440709
  09143 Cell growth and death
   04217 Necroptosis
    128440709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pplt03036]
    128440709
   03400 DNA repair and recombination proteins [BR:pplt03400]
    128440709
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pplt04147]
    128440709
Chromosome and associated proteins [BR:pplt03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    128440709
DNA repair and recombination proteins [BR:pplt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     128440709
   MMR (mismatch excision repair)
    Other MMR factors
     128440709
Exosome [BR:pplt04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   128440709
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5
Other DBs
NCBI-GeneID: 128440709
NCBI-ProteinID: XP_053279486
LinkDB
Position
5:6020369..6023049
AA seq 210 aa
MASYRAGGMGKMGKDPKKPRGKMSSYAYFVQTCREEHKKKHPGASVNFSEFSKKCSERWK
TMSQKEKGKFEDMAKLDKVRYEREMTSYIPPKGQKKKRFKDPNAPKRPPSAFFLFCADFR
PKVKIETPGLTIGDTAKRLGEMWNGLSAENKQPYEKKAAKLKEKYDKEIIAYRTKGKVEV
AAPAAPVEDDDDDEEDGDDDDDDDDDDDDE
NT seq 633 nt   +upstreamnt  +downstreamnt
atggcttcgtacagagctggcgggatgggaaagatggggaaggacccaaagaagcctagg
ggcaaaatgtcctcctacgcttactttgtgcaaacgtgccgggaggagcacaagaagaag
catcccggggccagtgtcaacttctcagagttctccaagaaatgctctgagagatggaag
acaatgtcacagaaggagaagggcaagttcgaggatatggccaaactagacaaggtgcgc
tacgagagggaaatgacgagttacattcctcccaagggccagaagaagaagcgattcaag
gaccccaacgcccccaagagaccaccgtctgcattcttcctgttctgtgcagactttcgt
cccaaggtcaaaattgagacccctggactcaccatcggggacacagcgaagaggctggga
gagatgtggaacggcctctctgcagagaacaagcagccgtatgagaagaaggctgccaag
ctgaaggagaaatacgacaaggaaatcattgcttaccgtacaaagggcaaagtggaagtt
gcagcacctgccgcaccagtggaggatgatgacgacgacgaagaggatggagacgatgac
gacgatgatgatgacgacgacgatgatgagtag

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