Pleuronectes platessa (European plaice): 128440709
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Entry
128440709 CDS
T09923
Name
(RefSeq) high mobility group-T protein
KO
K10802
high mobility group protein B1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03410
Base excision repair
pplt04140
Autophagy - animal
pplt04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128440709
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128440709
09143 Cell growth and death
04217 Necroptosis
128440709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pplt03036
]
128440709
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128440709
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pplt04147
]
128440709
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
128440709
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
128440709
MMR (mismatch excision repair)
Other MMR factors
128440709
Exosome [BR:
pplt04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128440709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
128440709
NCBI-ProteinID:
XP_053279486
LinkDB
All DBs
Position
5:6020369..6023049
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AA seq
210 aa
AA seq
DB search
MASYRAGGMGKMGKDPKKPRGKMSSYAYFVQTCREEHKKKHPGASVNFSEFSKKCSERWK
TMSQKEKGKFEDMAKLDKVRYEREMTSYIPPKGQKKKRFKDPNAPKRPPSAFFLFCADFR
PKVKIETPGLTIGDTAKRLGEMWNGLSAENKQPYEKKAAKLKEKYDKEIIAYRTKGKVEV
AAPAAPVEDDDDDEEDGDDDDDDDDDDDDE
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtacagagctggcgggatgggaaagatggggaaggacccaaagaagcctagg
ggcaaaatgtcctcctacgcttactttgtgcaaacgtgccgggaggagcacaagaagaag
catcccggggccagtgtcaacttctcagagttctccaagaaatgctctgagagatggaag
acaatgtcacagaaggagaagggcaagttcgaggatatggccaaactagacaaggtgcgc
tacgagagggaaatgacgagttacattcctcccaagggccagaagaagaagcgattcaag
gaccccaacgcccccaagagaccaccgtctgcattcttcctgttctgtgcagactttcgt
cccaaggtcaaaattgagacccctggactcaccatcggggacacagcgaagaggctggga
gagatgtggaacggcctctctgcagagaacaagcagccgtatgagaagaaggctgccaag
ctgaaggagaaatacgacaaggaaatcattgcttaccgtacaaagggcaaagtggaagtt
gcagcacctgccgcaccagtggaggatgatgacgacgacgaagaggatggagacgatgac
gacgatgatgatgacgacgacgatgatgagtag
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integrated database retrieval system