Pleuronectes platessa (European plaice): 128440766
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Entry
128440766 CDS
T09923
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128440766 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pplt04147
]
128440766 (copb1)
Membrane trafficking [BR:
pplt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
128440766 (copb1)
Exosome [BR:
pplt04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128440766 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
Cnd1
HEAT_2
HEAT
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
128440766
NCBI-ProteinID:
XP_053279570
LinkDB
All DBs
Position
1:complement(20639541..20648638)
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AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVASESEPPSEVSLKADLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAVKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFENLRPLIIEKMLEVFHAIRTVKIYRGALWILGEYCSTKEDIQNVMTEIR
RSLGEIPIVENEIKRETGEMKTEDEVSAAPAQKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKVALRYVIIVQDKKKHNSFVAEAMLIMVTVLHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRKSLSHMLTVRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNEMTSKEDQFQLSLLAAMGNTQRKEATDPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNITDLNEYLQHILRSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKNNV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgcagagaacgtttgttacactctcatcaatgtcgcatccgagtccgagcca
ccttcggaggtcagcctcaaagcggatcttgaaaagggggagatcaaggcaaagactgaa
gccctgaagaaggtcatcatcatgatcttgaatggtgagaagttgccagggcttctgatg
acaatcatccgcttcgtgctgccacttcaggaccacaccattaagaagctgctgctggtt
ttctgggagattgtccccaaaacaactccagacggcaagctgcttcaggagatgatcctg
gtctgtgacgcctacagaaaggacttgcagcatcccaatgagtttatccgtggctccact
ctgcgcttcctttgcaagctgaaggagtctgaactgcttgagcctctgatgccggcgatc
cgggcctgtctggagcaccgtcacagctacgtgcgccgcaatgctgtcctggccatttac
accatttacaggaactttgaacatctcatccctgatgccccagagctgatccatgatttt
cttgttaatgagaaagatgccagctgcaagagaaacgctttcatgatgctgattcatgca
gatcaggaccgagctctggattacctcagcacatgtattgaccaagtgcacacttttggt
gacattctccagctggtcattgtggagctgatttacaaagtttgccatgccaacccctct
gagcgtgcccggttcatccgctgcatctataacctgttgcagtcttccagcccggctgtg
aagtatgaggctgctggcactcttgtaaccctctccagtgctcccacagccgttaaggcc
gctgcccagtgctacattgatttgattatcaaggagagcgacaacaatgtgaagctgatt
gttctcgaccgcctgattgaactgaaggagcatcccactcacgagcgtgtactccaggac
ctagtgatggacatcctgcgtgtcctcagcactcctgacctggaagtcagaaagaagacc
ttgcagctggcactggaccttgtttcctcacgcaatgtagaagagttggtgattgttttg
aagaaagaagtgatcaagacgaacaacgtgacggaacatgaagacactgataagtacagg
cagctgttggtgcgcactcttcactcttgcagtgtgcgtttccctgatatggcggccaat
gtgatacctgtgctgatggaatttttaagcgacacaaatgaggcagctgctgctgatgta
ctggagtttgtacgggaggcaattcagagatttgaaaacttgagacccctcatcatcgag
aagatgctggaagtctttcacgccatcagaactgtcaagatttacaggggagcgctgtgg
atcttgggagaatactgcagcaccaaagaagacatccagaatgtgatgacagaaatacgc
aggtccttaggagagatcccaattgtagagaatgagataaagagagagacgggagagatg
aagacagaggatgaagtgagtgcagctccagcccagaagctggtgacagagatgggcacc
tatgtgacacagagtgccctcagctcctccaggccttcgaagaaagaggaagacagaccg
ccactcagaggcttcctgatggacggagacttctatgtggcagcttccctggccaccaca
ctaaccaaagtggccttgcgctatgttattattgtccaagacaaaaagaaacacaattca
ttcgttgcggaggccatgctgatcatggtcactgtgctgcacctgggcaagtcttctctg
cccaagaaaccaattaccgacgatgatgtggaccgcatctcgctttgcctgaaggtcctt
tcagagtgctcaccacttatgaatgacattttcaacaaggagtgccgcaaatccctgtca
cacatgctgactgtcagactggaggaagagaagctgtcacagaagaaggagtctgagaaa
cgtaacgtcacggtgcaggcagacgaccccatctccttcatgcagctcaccgccaaaaac
gagatgacttctaaggaggaccagttccagctgagtctgctggctgctatgggcaacact
cagaggaaggaggctactgatcccctggcttcaaagcttaacaaggtgactcagttgacg
ggcttctcagacccagtgtatgctgaagcctatgtgcacgtcaaccagtatgacattgtg
ttggacgtgctggtggtcaaccaaaccagcgacactctccagaattgcacccttgagttg
gcgactttaggtgatctcaagttggttgagaaaccctcacctctaactctggctccccac
gattttgcgaacatcaaggccaatgtcaaagtggcctctactgagaacggaattatattc
ggcaacattgtctatgatgtgtcaggagctgctagcgacagaaactgcgtcgtcctcagt
gacatccacattgacataatggactacatccagcctgcctcctgcactgatgcagagttc
agacagatgtgggcagagtttgaatgggaaaacaaggtgacggtgaacaccaatatcact
gatctgaacgaatacctgcagcatatcctcagatccaccaacatgaagtgtctgacgcct
gagaaggcgctgtctggcttctgtggcttcatggctgccaacctttatgctcgttctatc
tttggagaagatgctctggctaatgtcagcatcgagaagccaatccacctggggcctgat
gcacctgtcaacggacacatacgcattagagccaaaagccaggggatggccttgagcctc
ggagacaagatcaacctctcccaaaaaaagaacaacgtttga
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