Pleuronectes platessa (European plaice): 128440781
Help
Entry
128440781 CDS
T09923
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04142
Lysosome
pplt04144
Endocytosis
pplt05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128440781
04142 Lysosome
128440781
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128440781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128440781
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pplt04147
]
128440781
Membrane trafficking [BR:
pplt04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
128440781
Exosome [BR:
pplt04147
]
Exosomal proteins
Proteins found in most exosomes
128440781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
128440781
NCBI-ProteinID:
XP_053279589
LinkDB
All DBs
Position
5:28506281..28538442
Genome browser
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDLGDPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSCVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKNPELWASVL
LETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDDKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITLLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPADAWKEGQFKDIVTKVANVELYYKAIHFYLDFKPLLLNDLLIVLSPRLDHTRAVNFFS
KVKQLPLIKPYLRSVQNHNNKSVNEALNNLFIIEEDYAALRTSIDAYDNFDNISLAQGLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLAWFLNE
DKKECFAACLFTCYDLLRADVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDKL
EASESLRKQEEQATESQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYTATPGYAQPPQPNF
GYGM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgcctatccgcttccaggagcacctgcagctccagaacctgggcatc
aacccagccaacattggattcagcactctgaccatggagtctgacaagttcatctgcatc
agggagaaagtgggtgagcaggcccaggtcgtcatcatagatctgggcgaccccaacaat
cccatccgcaggcccatctctgcagacagcgccatcatgaaccctgctagcaaagttatc
gccctcaaagcggccaagaccctgcagatcttcaacattgagatgaagagcaagatgaag
gctcacactatgacagatgacgtgaccttctggaaatggatatccctcaacactgttgcc
ctggtcacagacaacgcagtctaccattggagcatggagggggactctcagccaatcaaa
gtctttgaccgtcactctagcctggctggctgccagatcatcaactatcgcaccgacgca
aaacagaagtggctgttgctcattggcatttcagcacagcaaaatcgtgtagtcggagcc
atgcagctatactcagtggacaggaaggtgtctcagcccattgagggccatgccgctggc
tttgcacagttcaagatggagggcaacactgaagagtcaactctgttctgctttgctgtg
cgaggacaggcaggaggaaaactgcatatcattgaagtgggtactccaccaactgggaac
cagccattcccaaagaaagctgtcgatgttttctttccaccagaagctcagaatgacttc
cctgtcgccatgcagatcagctcaaagcaagatgttgtctttctcatcaccaaatatggc
tatatccacctgtacgacctggagactggtacttgcatctacatgaacaggatcagtggg
gagaccatctttgtcactgccccccacgagcccactgctggtatcataggagtcaacaga
aaaggacaggtgttgtcggtgtgcgtggaggaggaaaacatcattccctacattaccaat
gtgctccagaacccagacctggctcttcgcatggctgtccgcaacaaccttgccggtgct
gaggagctgttcgcccgcaagttcaacaccctctttgcagctgggaattactcagaagct
gccaaggtggcagccaatgcgcccaagggtatcctgcgaaccccagacactatccgccgt
tttcagagtgttccagcgcaaccaggccaaacctctcctctgctccagtactttggcatc
ctgttggaccaaggccagcttaataagtttgagtctctggagctgtgcagacctgtcctc
cagcagggccgcaagcagctactagagaaatggctgaaagaggacaagctcgagtgctct
gaggagctcggagacttggtgaagtctgtcgatccaactcttgccctcagtgtctacctc
agagccaatgtccccaataaggtcattcaatgctttgctgaaactggtcagttccagaag
attgtcctctacgcgaagaaggtgggctacactccagactggatcttcctgctgaggaac
gtaatgcggatcagtccagagcagggacttcagttctcccagatgctggttcaggatgaa
gagccacttgctgacattacacagattgttgacgtgttcatggagtacaacctgatccag
cagtgcacatcctttctactagatgccctgaagaacaacagaccgatggagggaccactg
cagacacgcctgctggaaatgaatctggtccatgcaccacaggttgcagacgcaatcctg
ggcaatcagatgttcacccactacgatcgtgcacatgtggcacagctgtgtgagaaggcc
ggtctcctgcagagggcactggagcattatactgacctgtatgacataaagcgtgctgtg
gtgcacacacatcttctcaacccagagtggttggtgaatttctttggttccttatcagtg
gaggactctctggagtgtcttagggccatgctgtccgcaaacatccgccagaacctgcag
atatgtgtgcaagtggcctccaagtaccacgagcagctcagtactcagtccctcactgaa
ctgtttgagtcattcaagagctttgagggtttgttctacttcttgggttccattgtgaac
ttcagccaggatccagaggtccacttcaaatacatccaggctgcttgtaaaacaggccag
attaaagaagtggagagaatctgcagagagagtaactgctatgatcctgaacgtgtgaag
aactttctcaaggaagccaagctgactgatcagctgcctttaatcattgtgtgtgatcgc
tttgactttgtccatgatctggtgctttacctgtaccgcaacagcctgcagaagtacata
gaaatctatgtgcagaaggtgaacccaagccgtctgccagtcgtcattggagggttactg
gatgtagactgtgccgaggatgtgattaagaaccttatcatggtggtgcgaggacagttc
tccacagatgaactggtcgctgaagtggagaaaagaaataggctgaagctgctgctacct
tggttggaagctcgtattcatgaaggttgcgaggagcccgctacccacaatgctctcgcc
aagatctacatcgacagcaacaacaaccctgagcgcttcctgagggagaacccctactac
gacagctgtgtggtcggcaagtactgtgagaagagggacccccacctggcctgtgtggcc
tatgaaagaggacagtgtgaccaggaactgattaatgtgtgcaatgagaactctctgttc
aagagtctgtcccgctacctggtgcgccgcaagaatcctgagttgtgggcgagtgtgctg
ctggagaccaacaactacagaagaccccttattgatcaggtagtacagacagccttgtca
gagacccaggatccagaggaggtgtctgtcacagtcaaggcattcatgaccgctgacctt
cccaatgagcttatcgagctgctggagaagattgtcctggataactccgtcttcagtgag
cacagaaacctccagaacttgctcatcctgactgccatcaaagctgatcggacacgtgtg
atggagtacatcaaccgtctggacaactacgatgccccagacatcgctaacatcgccata
agcaatgagctctttgaggaggcctttgctattttcagaaaatttgatgtcaacacttcc
gctgtgcaggttttgattgagcacatcggtaacctagacagggcttatgagtttgctgaa
cgctgcaatgagccaccagtgtggagtcagctggcaaaggcccagcttcagaagggcctg
gtcaaagaagccatagactcttacatcaaagctgatgacccctctgcttatatggaagtg
ggacaagctgcagcacaaagtgggaactgggaggacctggtgaagttcctgcagatggcc
cgtaagaaggcccgtgagtcgtatgttgaaacagagttgatctttgccctggcaaagacc
aaccgcctggctgagcttgaggagttcatcaatggacccaataatgctcacattcagcaa
gtgggtgaccgctgctatgatgacaagatgtacgatgcagctaaactgctttataacaat
gtgtccaactttggccgtctggcctctactttggtccacctgggagagtaccaggcagct
gtggacggagcccgaaaggccaacagcacccgtacctggaaggaggtgtgttttgcgtgt
gtagatgggaaggagttccgtctcgcccaaatgtgtggcttacatattgttgtccacgcc
gatgaactggaggaactcatcaactattaccaggaccgtggctactttgaggagctgatc
accctgctggaggccgctctcggtctggagcgtgcacacatgggtatgttcacagagctc
gccatcctctattccaaattcaagccacagaagatgagggagcacttggagctcttctgg
tcccgtgtcaacattccaaaggttctcagggcagcagagcaggcccacctctgggcagag
ctggttttcctctatgacaagtacgaggagtacgacaatgccatcatcaccatgatgaac
cacccagctgatgcctggaaggagggccagttcaaagacattgtcaccaaggtggccaat
gtggagctatactacaaagccatccatttttatctggacttcaaaccattgttactgaat
gacctgctcatcgtcctctcgccaagactggaccacacacgcgctgtcaacttcttcagc
aaggtgaagcagctgcctctgataaaaccttacctaaggtctgtccagaatcacaacaac
aagtcagtgaacgaggcactcaacaacctcttcatcattgaggaagactacgcggctctg
cgtacttccatcgatgcctatgacaacttcgacaacatctcactggcgcagggcctggag
aagcacgagctgatagagttcaggaggattgcagcctaccttttcaagggcaataaccgc
tggaaacagagcgtagagctctgcaagaaggacaagctctacaaggatgccatgcagtat
gcgtcagagtccaaagacacggagctggcggaggaactcctggcttggttcctgaatgaa
gacaagaaggagtgttttgccgcctgccttttcacctgctatgacctcctgcgggccgac
gtggtgcttgagactgcctggcgacacaacatcatggacttctccatgccctacttcatc
caggtcatgagggagtatctgtctaaggttgatgcgataaaggaaaaggtcgacaaactt
gaagcctccgagtccctgaggaaacaggaggagcaggccacggagtctcagcccattgtt
tacggcacaccccagctcatgctcacagcagggcccaacgtggctgttcctccccagcag
ccctacggctacggctacacagcaacaccaggctacgcccagccgccacagcccaacttc
ggttatggcatgtga
DBGET
integrated database retrieval system
