Pleuronectes platessa (European plaice): 128440795
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Entry
128440795 CDS
T09923
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128440795 (npas1)
Transcription factors [BR:
pplt03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128440795 (npas1)
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
128440795
NCBI-ProteinID:
XP_053279611
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Position
5:11664492..11738979
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AA seq
815 aa
AA seq
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MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWSPLMEGGGNCSKVRRSALSLA
TDMFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCHTAPESASSSASASSLAGTPEPAPSSPHSPANEPTERGYF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGPTRQVRRPLGLVALAHTLPPSTL
NEVRMESQMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFIHVEDLENLRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSNATVSINHKAPHERNVIWVNYVLSRTELPDTPL
DLLQLPEGLRAERLRVSSSPTDSSPQARGSSGSQPVKGPAGKSDPDTKGREKFTAAAIQS
EDRRKRLLRSEPEGAPPETRRRLEELRHVEESVSASSDLASDSEGEEEEETEWELGGDSD
RLKQEDGGGGGKQSRGGDTPSRGERGGRAHNGRAVIQQLKSVVTPSSLTGSPGIKTEHDS
LTGGGRWGSHTQTSTSHPNQHQPSHAHTPSSSLNGDSPTTPIPDSSSSSEAPPKGLFTPP
SPALSPAMSVSSPLPREERAMSGLVSRGNIGNGCPGGGPDFELLQRLAAGGAAGRVLFHP
LALGPQGPQSLYAPSTIRYAPPELPPSHHHSAGHSDGLQLRSDHHKGPPPAFFPHLQRLA
GLPPFSGFSPSDSPFSSGLPFCMNGLRGAAGSEED
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccatgccgttcgtcagcgaagggaagtgtgtgagcgtggagtgggattttcta
caaggactgctggccaagcctcccaccctgccctgcctgcagaacctgcgcaaggagaag
tctcgcaatgcggcgcggtcacggcgggggaaggagaatttcgagttctttgagctggcc
aagatgttgcccctgcccggcgccatcaccagccagctggacaaagcctcggtcatccgg
ctgaccatcagctacctgcacatgcgcaccttcgccagccagggggacccaccctggagt
cctttaatggagggtggcggcaactgcagcaaagtccgacgatcggctctttctctggcg
acggacatgtttgagcagcacctcggggcacatctcctgcagtctctggatggctttgtg
ttcgtggtcagtcaggagggacggttcctctacatctcagagacagtttctatctacctg
ggactctcacaggtggagctgaccggcagcagcgtgtttgactacatccacccggcggac
cacgtcgagatggcggagcggctgggaatcaggccccatctgagggcggaggccggctgc
cacacggctcccgagagcgcctccagctccgcgtccgcctcctcgctggccgggaccccc
gagcccgctccgtcgagtcctcactctcctgcaaacgaaccgaccgagcgcggctacttc
atccgcatgaagtccacgctcaccaagagaggcctgcatgtcaagtcctctggatacaag
gtgatccacgtgaccggacgaatccgctgccgccccgccctcgtgccgggccccacgcgc
caggtgcgtcgcccgctgggtctggtggccctggcacacacgctcccgccctccacgctg
aacgaagtccgcatggagagccaaatgtttgtcttccgagtgaacatggacctacaggtc
acgtactgtgagaacaggatctctgagtacatggatctgaccccagcagaggtggtggga
catacctgttatcacttcatccacgtagaagacctggaaaacctccggcagagccatgaa
gacttgctgaggaaaggccaggtggtgactggctactaccgctggctccagaggagaggg
ggctacctgtggatccagtccaacgccaccgtctccatcaaccacaaagccccccacgaa
cgcaacgtcatctgggtcaactatgtcctgagccgaacagagttgcccgacactcccctg
gatctgctgcagcttccggagggcttacgagcggagagacttcgagttagctcctctccc
accgacagctcccctcaggcccgaggtagttcaggttcacagccagtaaagggcccagca
gggaagagtgaccccgacactaaagggagggagaaattcactgccgccgccatccaatca
gaggacaggaggaagcgcctcctgaggtccgaacccgagggcgctccacccgaaacccgc
cgcagactggaggaactccgccacgtagaggagagcgtgtccgcctcctctgacctggcg
agtgatagcgagggggaggaagaggaagaaacggagtgggagctggggggggacagtgac
agactgaaacaggaagacggcgggggaggaggcaaacagagcagggggggagacaccccg
agcagaggggagagaggagggagggcgcacaacggccgggctgtgatccagcagctgaag
agtgtggtgaccccgtcttctctgactggcagccccggcatcaagactgagcacgactcc
ctcaccggcgggggtcgctgggggtcacacacacaaacctccacctcgcatcccaaccag
caccagccctcacacgcacacacaccctccagcagtctcaacggcgacagccccaccacc
ccgatccccgactcctcttccagcagcgaagcccctcctaaaggtttgttcactccgcca
tccccggctctgtcccccgccatgtccgtgtcctccccgctgccccgcgaggagagggcc
atgtcgggcttagtcagtcgaggcaacatcggcaacggctgcccaggtggtggtcctgac
tttgagctgctgcagagactggctgcaggtggtgctgcggggcgggtcctctttcacccc
cttgccctcggcccacagggtcctcagagcctctacgcccccagcaccatccgctacgct
ccacctgagctgcctccctcccaccaccacagcgcgggacacagtgatggcctgcagcta
cgctcagaccaccacaagggacctccgccagccttcttcccccacctgcagcggctggcc
gggctgccacccttcagtggtttctctccgtctgacagccctttctcctccggcctgccc
ttctgtatgaatggactgaggggggccgcaggctcggaggaggactga
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