Pleuronectes platessa (European plaice): 128441801
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Entry
128441801 CDS
T09923
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pplt01009
]
128441801 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128441801 (hdac6)
04131 Membrane trafficking [BR:
pplt04131
]
128441801 (hdac6)
03036 Chromosome and associated proteins [BR:
pplt03036
]
128441801 (hdac6)
Enzymes [BR:
pplt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
128441801 (hdac6)
Protein phosphatases and associated proteins [BR:
pplt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128441801 (hdac6)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128441801 (hdac6)
Membrane trafficking [BR:
pplt04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
128441801 (hdac6)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
128441801 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
128441801
NCBI-ProteinID:
XP_053279876
LinkDB
All DBs
Position
6:1717525..1726524
Genome browser
AA seq
1103 aa
AA seq
DB search
MSSGGSEMKSEPDPPGSGSKSARRSPRLSPQNEGKETRRGGESLKEMKRRGKMDRSRDQT
EDELNNRLQTLNLSSRSSVSGTGLVYSDIFTHHQNLWEPSHVESPHRVTSIMKELETQEL
LSHCIRVEPREATEDELLLAHMKPYVDMIKSTQTMSESELHTLSEKYDSVYLHPESFKVC
ASAVGSVLQLVDQVMTSELRNGFAVIRPPGHHAQANEPNGFCVFNSVAIAARYAQVKHSA
SRVLIVDWDVHHGQGIQYLFQEDPSVLYFSVHRHEQGSFWPHLAESDGGFVGSGRAEGLT
MNLAWDKTGMTDADYITAFQQLLLPVAHEFQPQLVLVSAGFDAAVGDPKGEMCVAPQCFH
VLTHLLMSLAEGRLVLALEGGYNLQLTAEGVAACVRALLGGACPSLTPPSAISDSALQSL
SRTVSAQYPHWASLQVLGGVSLAEGSVIRAMTDEQSREGPSSAPSVVTTTGLVYDERMME
HLNMWDRHHPEQPQRIAKIFSKHQQLGLVERCQRIPARLATEEELTMCHSKQHVKLIKSS
SGMKSRDLHKLGEEFNSIFFNNQSFHSAQLAAGGCFNAVERILRGEVSNGVAIVRPPGHH
AERDSPCGFCFFNTAALAARHAQKISHHAPLRVLILDWDVHHGNGTQHMFEDDDSVLYIS
LHRYDNGIFFPSSEDAAPNRVGVAKGAGFNVNVAWSGGRMGDADYLAAFHHIVMPIATEF
NPGLVLVSAGFDAARGDPLGGYHVTPEGYAHLTHLLMSLAGGRVLLILEGGYNLSSISES
MALCTSMLLGDPPPPLVTPLPPPHRCAVATISEVIRHHAPYWRSLRINIPESVRASLPSP
KHHGKRSSKGKGRKSEQSGTDRPPLPPAGAKDLMAEQSLDQLTQGLASLDLSHTSVSHTP
ATSTPVGGARSKVRPSPEVTCEGEVKAESTSVAVCEQNQSADSTLPQTQIVVGDEAAGRA
GAELEAAGACGWSKPQICVELTCGGGTDESSLYVVDPLPWCPHLDSVKPLPSSGINIFMP
CQDCGSEAENWICLTCYQVLCGRYVNEHMVTHGVVSEHPLVLSFSDLSVWCYRCESYVHN
QVLFEAKNAAHCAKFGEEIPPWS
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaggtggatcagagatgaagtccgaaccggatcctccaggatctggatctaag
tcagccagaagatctcctcgtctgtcccctcagaatgaaggaaaggagacaagaagagga
ggagagagtctcaaggagatgaagaggagaggaaagatggaccgaagcagagatcagacg
gaggacgagctaaacaacagactgcagacactgaacctgtccagcagatcttcagtcagt
ggtactggtcttgtttactctgacatcttcactcatcatcagaacctgtgggaaccaagt
catgtagagagtccacacagagtgacgtccatcatgaaggagctggagacacaagagctg
ctgtctcactgcatcagagtggagcccagagaagccacagaggacgagctgcttctcgct
cacatgaaaccttatgtggacatgataaaatcgactcagacgatgtcagagagtgaacta
cacactctgtctgagaaatacgactctgtttacctgcatcctgagtccttcaaggtgtgt
gcgtcggcggtgggttcggtgctgcagctggtggatcaggtgatgacctctgaactcagg
aatggattcgctgtcatcaggcctccaggtcatcacgctcaggccaacgagccgaacgga
ttctgtgttttcaacagcgtcgccatcgctgctcgctacgctcaggtcaaacactcagcc
agcagagtgttgatagtggactgggatgtgcatcatggccaggggatccagtacctgttt
caggaagaccccagtgtcctgtacttcagcgtccacaggcacgagcagggatctttctgg
cctcacctggccgagtctgacggggggttcgtgggcagtggacgagctgaaggacttacc
atgaacctggcctgggacaagacggggatgactgatgctgattacatcactgcttttcaa
caactgctgctgcctgttgcccacgagtttcagcctcagcttgttctggtctctgctgga
ttcgatgctgcagtcggagatccaaagggggagatgtgtgtggctcctcagtgtttccat
gttctgactcacttgttgatgagtttggctgaaggtcgactggttcttgctctcgaggga
ggttataacctgcagttgacagcagagggcgttgcagcctgtgtcagagctctgctggga
ggagcctgtccttctctgactccgccctctgctatatctgacagtgccttgcagtcgctc
tctcggaccgttagtgctcagtatccacactgggcgagtctgcaggtgctgggaggcgtc
tcattggctgagggcagtgtcatcagagcaatgactgatgagcagagtagggaggggccc
agctccgccccctctgttgtcaccacaacaggtctggtttatgatgagaggatgatggag
catctgaacatgtgggaccgacatcacccggagcaacctcagagaatcgccaagatcttc
tccaaacaccagcagctgggactggtggagcgctgccagaggataccagcacgcctggcc
acagaggaggagctgaccatgtgtcacagtaagcaacatgtgaagctcattaaatcgtcg
tcggggatgaagtccagagatcttcataaactgggagaagagtttaattcgattttcttc
aacaaccagagttttcattctgctcagcttgcggctggaggctgttttaacgctgtggag
agaatcctgagaggagaggtgagtaacggcgtggcgatcgttcgacctcctggacatcac
gcagagagagactctccatgtggcttctgcttctttaacacggccgcgctcgccgctcgc
cacgcccagaaaatctcccatcatgccccactgcgagtcctcatcctggactgggacgtt
caccatggcaacgggacacaacacatgttcgaggacgatgacagtgtcctgtacatctcc
ctccatcgctatgacaacgggatattctttccatcgtcggaggacgccgccccaaaccga
gtgggtgtggccaaaggggcggggtttaacgtcaacgtggcgtggagcggaggacggatg
ggcgacgctgactacctcgcagcttttcaccacattgtcatgccgatagctaccgagttt
aaccccggtctggtcctggtgtcggccgggttcgacgcagcgcggggtgacccgctaggc
ggatatcatgtgacccctgagggatacgcccacctcacacacctgctgatgtcactggcc
ggggggcgggtcctcctcatactcgagggaggttacaacttgtcgtccatctctgagtcc
atggcgttgtgcaccagcatgttgctaggagaccctcctccaccccttgtgaccccactc
cccccccctcatcgctgcgctgtggcaacaatcagcgaggtcatccgacaccacgccccc
tactggaggtccttgaggataaacatcccagagtctgtgcgggcgtccctgccctccccg
aagcatcatgggaaacgtagttcgaaaggaaaaggcagaaagtccgagcagagcggcact
gacagacccccgctgccccctgcaggagcgaaggacttaatggcggagcaaagtcttgac
cagctcactcagggattggccagtttggacctcagtcacacttcagtcagtcacacacct
gcaacgtccactccagtgggcggggccaggtcgaaggtccggcccagcccggaggtcacg
tgtgagggtgaagtaaaggcggagtccaccagtgtagccgtatgtgagcagaaccaatca
gcagacagcacactgccacagactcagattgttgttggagacgaggctgctggaagagcg
ggggcggagcttgaggcagcgggggcgtgtggttggtcgaagcctcagatttgtgtggag
ctgacgtgtggaggaggaacagacgaatcgtctctatacgtggtcgaccctctcccctgg
tgtcctcacctggactctgttaagcccctcccctcctcaggtataaacatcttcatgccg
tgtcaggactgtggctctgaagctgagaactggatctgtctcacctgctaccaggtgttg
tgtggtcggtatgtgaacgaacacatggtgactcacggtgtcgtgtctgaacatcctctg
gtcctgagcttctccgatctctctgtgtggtgttaccggtgtgagtcctacgtccacaac
caggttctgttcgaagcaaaaaatgctgctcactgtgcgaagtttggagaagagatccct
ccatggagctga
DBGET
integrated database retrieval system
