Pleuronectes platessa (European plaice): 128441852
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Entry
128441852 CDS
T09923
Symbol
sox18
Name
(RefSeq) transcription factor Sox-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128441852 (sox18)
Transcription factors [BR:
pplt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128441852 (sox18)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
RuBisCO_large
Motif
Other DBs
NCBI-GeneID:
128441852
NCBI-ProteinID:
XP_053279940
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All DBs
Position
6:360622..364139
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AA seq
519 aa
AA seq
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MSLPEPRLSRETVLTLGGHWTSRTPSPTSDSEMGFERTLSEDCGSPDGLGAGSVRRTEPR
ISLTPGSGGQSPDLTQAGGGSVGTADGKVVGGEQRIRRPMNAFMVWAKDERKRLALQNPD
LHNAVLSKMLGQSWKNLSSTDKRPFVEEAERLRVQHLTDHPHYKYRPRRKKATKKLKRVE
PGVLLHSLAQGGAAGLGLGPDGVSGGSAYGHPLPHPHPHHLLPSLGHFRDLQAPGHPELD
SYGLPTPEMSPLDVLEDGESVFFPQHIQEEGVMGGWSGYQHHHHHHLHHPNQHYSPHYSS
PHGSVHTQGSGMICPAESSLSSSRLNPSHASCHHVTLRSPVKCPPTLSPSPASYPPPSIS
LSEPMKCHQTPLSSAPVGYFSQMCGNSAHGTAHFPPSHLGQLSPPPESPSSASVPPSSFL
SHVDPSNPESSGHLGSSSADFWSEVDRHEFDQYVNTGRSRDEAFGLGVGCGGGSKAPGGR
SSIMSRDAMLSACDDGSTPLISALSDASSAVYYSACITG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaccggagcccaggttgtccagagagaccgttctgactctcgggggtcactgg
acgtccagaaccccgagtcccacttctgattctgagatgggttttgagcggaccctgtcc
gaggactgcggctcccccgacggcctcggagccgggagcgtgaggagaaccgaaccgagg
atctctctgacccccggttcagggggacagagcccggacctgacccaggcgggagggggg
tcggtgggcacggccgacgggaaggtggtggggggggagcagaggatccgcagacccatg
aacgccttcatggtttgggccaaagacgagaggaagagacttgcgctgcagaacccggac
cttcacaacgcggtgctcagcaagatgctcggtcagtcgtggaagaacctgagctccaca
gacaagcgtccgttcgtggaggaggccgagcggctgcgtgtgcagcacctcacggatcac
ccccactacaagtaccggcctcgcaggaagaaggccaccaagaagctgaagagggtcgaa
ccgggggtcctgcttcacagcctggcccaggggggggccgccggcctggggctgggacct
gacggtgtctccggaggttctgcatatggacaccctctgccccacccccacccccaccac
ctgctgccctctctgggtcacttcagggacctgcaggccccgggacacccggagctggac
agctatggcttgcccaccccggagatgtcccctctggatgtcctggaagatggagagtct
gtgtttttcccccaacacatccaagaggagggggtgatgggaggttggagcgggtaccag
caccaccaccaccaccacctccaccatcctaaccagcattacagtccccactacagcagc
ccccacggctcggtgcacactcagggctccgggatgatctgtcctgccgagtccagcctg
agctccagcaggttgaacccgtcccatgcgtcctgtcaccacgtcacgttacgcagtcca
gtgaagtgcccccccactctgtccccctcccctgcatcctaccccccgccctccatcagc
ctgtcagagccaatgaaatgccaccaaacccccctgagctccgcccccgtcggctacttc
agtcagatgtgtgggaactcagctcatggcaccgcccacttccccccctctcacctgggg
cagctgtcccctccccctgagtccccctcctctgcctccgtccctccatcttcttttctt
tctcacgtggacccgtccaacccggagtccagtggacacctgggctcctcctccgctgac
ttctggtctgaggtggacagacacgagttcgaccagtacgtgaatactgggaggagccga
gacgaggccttcggactgggtgtcggctgtgggggcgggtccaaagccccgggtgggcgc
agcagcatcatgagcagggacgccatgttgagtgcgtgtgatgacggcagcacccccctg
atctccgccctgtcggacgccagcagcgccgtttactacagcgcctgcatcactggataa
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