Pleuronectes platessa (European plaice): 128441934
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Entry
128441934 CDS
T09923
Symbol
clstn1
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pplt04515
]
128441934 (clstn1)
Cell adhesion molecules [BR:
pplt04515
]
Cadherins
Cadherin related
128441934 (clstn1)
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Paralog
GFIT
Motif
Pfam:
CLSTN_C
Ig_CLSTN
Cadherin
Laminin_G_3
CDC45
FAM176
Laminin_G_2
EphA2_TM
TMEM132_C
Toxin_R_bind_N
V_ATPase_I
Cadherin_C_2
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
128441934
NCBI-ProteinID:
XP_053280038
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All DBs
Position
6:15021179..15052141
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AA seq
954 aa
AA seq
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MRFQGNTRFASAVGLVLGLLCALEAAKVNKHKPWIETTYHGIVTENDEKVLLDPPLIALD
KDAPLRYAGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKDKLDCELQKEHTFTIQAYDC
GEGPDGANMKKSHKATVHIQVNDINEYSPVFKEKSYKATVIEGKKYDSILKVEAVDADCS
FQYSQICNYEIVTPDVPFTVDKEGFIKNTEKLSYGKERMYKLTVTAYDCGKNRASEDVLV
KISVKPTCKPSWQGFNKRIEYEPGTGSLALFPSMHLETCDEPITSIRASIELETNHIGKG
CDRDTYSEKSLHKLCGASSGTVELLPAPSSSANWTVGLPTDNGHDSDQVFEFNGTQAIKV
PEGMVSTSLKEPFTISVWMRHGPGAHEKETILCNSDKTEMNRHHYSLYVHNCKLILLLRQ
DPSEAENYKPAEFHWKLDQVCDKEWHHYVLNVEFPTVSLFVDGTTFEPFLVAEDYPLHAS
KIASQLTIGACWQGGNARMGQFFRGNLAGLMIRSGKLENKKVIDCLYTCKEGLDVQLPEE
VASAVKVEINPNQSSLTVEGDDIDAFDKVMQHISYLNSRQFPTPGIRHLRISTTVKCFNE
ESCVSVPDAEGYVMVLQPEEPKISLSGIDHFARSAAEFESQEGVTLFPELRIVSTITREV
EADAETEVTEGADDDPTVQEAVVSEEIMHNLDTCEVSVVGDELDGEHESLEVDMSQLQPL
GLEMSSSNLGLVITGVNTMAHYEQVLHLIRYKNWHTEALFDRKFKLVCSELNGRYISNDF
KVEVNVIHTANPVEHANNAMVQPNFINPIHHASVDLSGHNLVNAHQASVVPSAATIVIVV
CVSFLVFMIILGVFRIRAAHQRTMTDQESGKENEMDWDDSALTITVNPMETYEDQHSSED
DEEEEEESEDGEEEDDITSAESESSEDEEGAEPEDQQGASRQQQLEWDDSTLTY
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgcggttccaagggaatacacgatttgcctccgctgtcggactggtcctcggactatta
tgtgcgctggaagcagctaaagtcaataagcacaaaccatggattgagacgacgtaccat
gggatcgtaacggaaaacgatgagaaagtgctactggacccccctctaattgcactggac
aaggatgctcctctacgctatgcaggtgagatttgcggcttcagaatccacgggcagaat
gtcccctttgaggcagtggtccttgacaagtccactggcgagggggtcatccgggccaag
gacaagctggactgtgagctgcaaaaggagcacaccttcaccatccaggcctacgactgt
ggagagggtcctgatggtgccaacatgaagaagtcccacaaggccaccgtccacatccaa
gtgaacgacatcaacgaatattcacccgtgttcaaggagaagtcctacaaagccaccgtc
atcgagggaaagaagtatgacagcatcctgaaggtggaggcagtggacgccgactgctcg
ttccagtacagccaaatctgcaactatgagattgtcacccctgatgtgcccttcactgtc
gacaaagaaggcttcattaagaacacagagaaactgagctacggcaaagagcgcatgtat
aagctgactgtgactgcctacgactgtggaaagaaccgcgcctcagaggacgtgctggtc
aagatcagcgtcaaacccacctgcaaacccagctggcaaggcttcaataagaggattgaa
tatgagcctggcacaggtagcctggcccttttccccagcatgcacttggagacctgtgat
gaaccaatcacctctatccgagccagcattgaactggaaaccaaccatatcgggaagggc
tgtgaccgtgacacctattctgagaagtccctgcacaagctgtgcggtgcgagctctggt
acagtggagctcctccctgcaccgagcagctctgccaactggacggtcgggctgcccacc
gataacgggcacgacagtgaccaggtgtttgagttcaatggtacccaggccatcaaggtc
cccgagggcatggtgagcaccagcctgaaggaacccttcaccatatctgtgtggatgaga
catggccccggggcccatgagaaggagaccatcctctgcaactctgacaagacagagatg
aacagacaccactactctctctacgtccacaactgcaaactgatccttctcctccgtcag
gatccatctgaagccgagaactacaaaccagcagagtttcactggaaactcgaccaggtg
tgtgacaaagagtggcatcactatgtactgaacgtggagttccccaccgtgtctctgttt
gtggatggaactacgtttgagcccttcctggtcgcagaggactacccactgcacgcctcc
aagattgcatctcagctcacgattggtgcctgctggcaaggcggaaacgctcgtatgggt
cagtttttccgagggaaccttgcagggctcatgattcgctctggaaaactggagaacaag
aaggtgatcgactgtttgtacacatgcaaggagggcctggatgtgcagctgcctgaggag
gtcgcttcagctgtcaaggtggagatcaaccccaaccagtcttctttgaccgtggagggt
gacgacatcgatgcctttgacaaggtcatgcagcacatctcctatttgaactctcgccag
ttcccgacacctggcatcaggcaccttcgcatctccaccaccgtcaaatgcttcaatgag
gagtcctgcgtttcggtgccagatgctgagggttacgtgatggtgctgcagcccgaagaa
ccaaagatcagcctgagcggcatcgaccacttcgcccgcagtgctgccgaatttgagagc
caggaaggtgtgacgctgttccccgagctacgcatcgtgagcaccatcacccgtgaagtg
gaggctgacgctgagactgaagtcacggagggagctgatgatgaccccacggtccaagag
gcagtggtgtcagaggagattatgcacaacctggacacgtgtgaagtgagtgttgtggga
gacgagctggacggggagcacgagagcctggaggtggacatgtcccagctgcagccgctc
ggcctggagatgagctcctctaacctgggcctcgtcatcacaggtgtgaacaccatggcc
cactacgaacaggttctgcacctgatccgttacaagaactggcacactgaggctctgttt
gacaggaagttcaaactggtttgctctgagctcaacgggcgctacatcagcaatgacttc
aaggtcgaggtgaatgttatccacactgccaatcccgtggagcatgccaacaacgccatg
gtgcagcccaatttcattaaccccatccatcatgcctctgtggatctgtctggtcacaac
ctggtcaacgctcaccaagcctcagtggttcccagcgctgccaccattgtcatcgtggtg
tgcgtcagcttcctggtgttcatgatcatcctgggcgtgttccgtatccgtgctgctcac
cagcgaaccatgacagaccaggaaagtggcaaggagaacgagatggactgggacgactcg
gctctcaccatcaccgtcaaccccatggagacgtacgaggaccagcacagcagtgaggat
gatgaggaagaggaggaggagagcgaggacggagaggaggaagatgacatcacgagcgct
gagtcagagagcagcgaggacgaggagggcgcggagccggaggaccagcagggcgccagc
agacagcagcagctggagtgggacgactctaccctcacctactag
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