Pleuronectes platessa (European plaice): 128442009
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Entry
128442009 CDS
T09923
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pplt03041
]
128442009 (rbm39b)
Spliceosome [BR:
pplt03041
]
Common components
Common spliceosomal components
General mRNP proteins
128442009 (rbm39b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
128442009
NCBI-ProteinID:
XP_053280135
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All DBs
Position
6:8888589..8898219
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AA seq
520 aa
AA seq
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MADDFDVEAMLEAPYRKDEIKSSHANGHDDQNKKKRRSRSKSRSPGTKKRRSRSKDKKKG
KKRSRSRERKPSRSRERHRSGSRSKERSGRYRARKSPIRKRSKSRSPFKKEKSPISNTTS
KFDVAQMRDYQENQKTHRQPIDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRD
VRMISDRNSRRSKGIAYIEFVDTSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANN
LQKGSSGPMRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADA
ECAKKALEQLNGFELAGRPMKVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMA
RLAEGTGLKIPPAAQQALQMTGSIPFGNMSSQQSVPTPAQSQAMNLPSQPLATHCLQLSN
LFNPQAENDPTWATEIQDDVIEECNKHGGIVHIYVDKNSTQGNVYVKCPSIPAAMATVNA
LHGRWFAGKMITAAYVPLPTYHNLFPDSVTAKQLLMPTRR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgttgaggccatgctcgaggctccatacagaaaggatgagatc
aagtcctctcatgcaaatggccatgacgaccagaataaaaagaaacggaggagcagaagt
aagagccggagcccaggcactaagaaaagaagaagcagaagcaaagacaaaaagaagggt
aagaagaggagccggagccgagaaagaaaaccaagccgcagcagagagcgacatcgcagc
ggctcccggagcaaggaacgatctgggcgttacagagcacgaaagagccccattcgcaaa
cgttccaaaagtcggagcccgttcaaaaaggaaaagagtcccatcagcaataccaccagc
aagtttgatgtagctcagatgcgtgattatcaagaaaatcaaaagactcacaggcaacca
attgacaatctaacacctgaggagcgggatgcacgcacagttttctgtatgcagctcgct
gccagaatcagagctcgggacctggaagactttttctcagctgtcggaaaagtcagagac
gtgagaatgatctcagacagaaactccaggaggtcaaagggcatcgcgtacatcgagttt
gtggacacctcttctgtgcctctggccatcggactgactggccagaggcttttaggagtt
cccatcatcgtccaggcctctcaggcagagaaaaacagagctgcagcggctgctaacaat
ttacagaagggcagttcaggtccgatgcggctgtacgtgggctcgctgcatttcaacatc
accgaagaaatgctccgagggatctttgagccctttggaaagattgaaggaatccagctc
atgatggacagtgagactggacgatccaaaggctatggcttcatatcgtttgcagatgca
gaatgtgcaaaaaaggccctggagcagctgaacggctttgaactggccgggcgtccgatg
aaggtggggcatgtgacggagcgctcggactcctctacggccagttccttcctggacaac
gacgaactggagaggaccggcatcgacctgggcaccaccgggcgtttacagctaatggct
cgactagccgaaggaactggtctaaagatcccccccgctgctcagcaggctctgcagatg
actgggtccataccgtttggaaacatgtcttctcaacaatctgtcccaactccagctcag
agccaggccatgaacctcccctcccagccgctggccacacactgcctccagctgtccaac
ctgttcaacccacaagcggaaaacgatcccacctgggccactgagatccaagacgatgtg
atcgaggagtgcaacaaacacggaggaatagttcacatttatgtggataagaactcgact
caaggtaatgtgtatgtgaagtgtccctcgataccagcagcgatggcaaccgtaaatgca
cttcatggacgctggtttgcaggcaaaatgataacggctgcctacgtccccttacccacc
taccacaaccttttccctgattctgtaacggcgaagcagcttctaatgccgactcgtcga
tag
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