Pleuronectes platessa (European plaice): 128442219
Help
Entry
128442219 CDS
T09923
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128442219
04121 Ubiquitin system [BR:
pplt04121
]
128442219
Transcription factors [BR:
pplt03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128442219
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128442219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
OrsD
Motif
Other DBs
NCBI-GeneID:
128442219
NCBI-ProteinID:
XP_053280530
LinkDB
All DBs
Position
6:19588672..19591794
Genome browser
AA seq
712 aa
AA seq
DB search
MNKNHFIYTRHVFTPSMRTFDLSDGALDTCAMHSHHLANQMKQQLAVGAGSVPGSYVPPG
PMCSGATLKLVGVNFVATASLCNTMAEKGENSEENVVDEDLVVKKNCTSAIWSYFGFRSD
DVLQTQVLCKTCRTAVATSRGNTTNLHHHLQHNHKELHEQFKASQTTKPKTVSSSKSKTL
QQSISQSFACVTPYEKTSKRHGEITEAITRYLAKDMMPINTVTKDGFVSLIRKLDRRYSI
PSRNYFSQVAIPKMYDTCRKTVESELGQIEHYACTTDLWSSRTTEPYISLTVHFLDQDFE
LKTRCLQTAYFPGEHTGENIACGLREALTSWNLREEQLACITTDNGSNVVKATELNHWVR
LQCFGHRLHLAIENAVKDDSRIARAAGLCKKLVGHFSHSWKQKMALKEAQQEHNLPEHSL
ITECPTRWGSRQKMMERILEQRQAISNVLSADRKTRHLVPSWQDLDVLESVNLALHPLQV
FTDALSGESYVSVSYVKPVLHLLNTSVLAEKEDDTNLTKTIKVKILDYMNTKYDDPATQE
LLDTASFMDPRFKVSYISSERVQDIKTRVMSEMKETARKEGTPSDNTEAQSMDPPSNKKA
KRSLGSLLKTSPGPTTPTASSMQLEQALEAELNSYLLSPTIDSEADPLAWWKLHQVTYSR
LSKLARRYLCIAATSSPSERLFSTSGNVVTCQRACLKPSKVNMLVFLAKNLP
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatcattttatttacacgcgccatgtattcacacccagcatgcgaacattt
gacctatcagatggagccctggatacatgcgccatgcattcacaccatttggctaatcag
atgaagcaacagctagccgtcggcgccggcagcgtccccgggtcctatgttcccccgggt
cctatgtgttccggagccaccctcaaattagttggtgttaattttgtggcgactgcgagt
ctatgtaacacgatggcggagaaaggagagaatagcgaggaaaatgtggttgacgaagac
cttgtggtgaaaaagaactgcacttctgcaatttggagttattttggattccgtagcgac
gacgtgttacaaacacaggtactgtgtaaaacatgccgaacagctgtggcaacttccaga
ggaaatacaacaaacctccatcaccacctgcaacacaaccataaagaactacacgaacaa
ttcaaagctagccaaaccacaaaaccaaaaacggtgagtagcagcaaatctaaaaccttg
caacagtccatttctcagagttttgcgtgcgtgactccttacgagaaaacatccaaacgc
cacggagaaataacagaggccataactcgttatttggctaaggacatgatgcctataaac
acagtgaccaaagatggttttgtgagtctgataaggaaactggaccgaagatacagcatt
ccatcacgcaattatttttcccaagtcgccattccaaaaatgtacgacacatgcaggaag
acagtggaatcggaactgggtcaaattgaacactacgcctgtaccacagatctttggtcc
agtcgaacgacagagccctacatcagcctcactgtacacttcctggatcaagactttgaa
ctgaaaacgcgatgtctacagacagcctacttccccggagaacacactggggaaaacatt
gcgtgtggactacgtgaggctttgaccagctggaatttgcgggaagagcagctagcttgc
atcaccaccgacaacgggtcaaacgttgtgaaggccaccgaactcaaccactgggtcaga
cttcagtgttttggccacaggctgcatcttgccatcgaaaatgctgttaaagatgacagc
cgcattgcccgtgctgctgggctttgtaaaaaattggtgggacatttctcccacagctgg
aagcagaagatggcactgaaagaagcacaacaggagcacaacctcccagagcactcactc
atcacagaatgcccaactaggtggggctcgaggcaaaagatgatggagaggatcttggag
cagcggcaagccatatctaatgtcctctcggcagaccgaaaaacacggcatctggttccc
tcctggcaggacctggatgtactggagtctgtaaacctggcattacaccctttgcaagta
tttactgatgctctttccggggaaagctatgtgagtgtttcatatgtgaaaccagtcctt
catctcttgaatacatcagttcttgcagaaaaggaagatgacaccaatttaaccaagacc
attaaagtgaaaatcctggattacatgaatacaaagtatgatgacccagcaacacaagaa
cttctggacactgcatccttcatggaccccaggttcaaggtcagctacatcagcagcgaa
agagtccaagacatcaagaccagggtgatgtcagaaatgaaagaaacagcacggaaggag
ggaacaccttctgacaacactgaggcccaaagcatggatccacccagcaacaagaaggca
aagcgatcattgggcagtttgctcaaaacaagtccaggccccaccactcccaccgcatct
tccatgcagctggagcaagctcttgaagctgaacttaacagctacttgctgtcccccacc
attgacagtgaggcagaccctttggcttggtggaaactccaccaggtcacctactcaagg
ctgagcaaactagctcggaggtatctttgtatagctgccactagttcaccctctgagagg
ctattcagcacatcagggaatgtggtaacatgtcaacgtgcatgtttgaaacccagcaaa
gtcaacatgctggttttcttggccaagaacttgccctaa
DBGET
integrated database retrieval system
