Pleuronectes platessa (European plaice): 128442222
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Entry
128442222 CDS
T09923
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03030
DNA replication
pplt03410
Base excision repair
pplt03420
Nucleotide excision repair
pplt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128442222 (rfc2)
03410 Base excision repair
128442222 (rfc2)
03420 Nucleotide excision repair
128442222 (rfc2)
03430 Mismatch repair
128442222 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pplt03032
]
128442222 (rfc2)
03036 Chromosome and associated proteins [BR:
pplt03036
]
128442222 (rfc2)
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128442222 (rfc2)
DNA replication proteins [BR:
pplt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128442222 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
128442222 (rfc2)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
128442222 (rfc2)
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128442222 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
128442222 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_14
AAA_16
Viral_helicase1
AAA_11
AAA_24
Mg_chelatase
MipZ
AAA_19
Rad17
DEAD
nSTAND3
AAA_18
RuvB_N
AAA_5
AAA_assoc_2
AAA_30
DNAX_ATPase_lid
ABC_tran
RNA_helicase
MeaB
AAA_28
SLFN-g3_helicase
AAA_25
NTPase_1
AAA_23
AAA_2
MCM
Motif
Other DBs
NCBI-GeneID:
128442222
NCBI-ProteinID:
XP_053280534
LinkDB
All DBs
Position
6:1226839..1229915
Genome browser
AA seq
382 aa
AA seq
DB search
MRSQVAVARLPGRETSCSSSRADSDMEVEMIESEPRPGEKSQEAATENTEAGEGSSRSSG
AYELPWVEKYRPLRLSEIVGNVETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARA
LLGASMKDAVLELNASNERGIDVVRNKIKMFAQQKVTLPKGRHKVIILDEADSMTDGAQQ
ALRRIMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYSKLTDGQILARLQEVVEKERLS
VSDDGLEAVIFTAQGDMRQALNNLQSTNSGFGYINSENVFKVCDEPHPLLVKSMLGHCVE
GQIDEAYKVVEQLWALGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIGYTHMRVAEGVN
SLLQMAGLLGRLCSKTMTPPAS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtcaggtggctgtggcgcggttgccagggagggaaacgtcgtgcagcagttcg
cgggctgacagcgacatggaggtggagatgatcgagtccgagccgcggccgggggagaag
agccaggaggcggccacggagaacacggaggccggggagggctcgtcgagaagctccgga
gcctacgagctgccctgggtggagaagtaccgcccgctgcgcctgagcgagatcgtgggc
aacgtggagacggtgagccgcctggaggtgttcgcccgggaggggaacgtccccaacatc
atcatcgcaggcccccccggcaccggaaagaccaccagcatcttgtgtctggcccgagcg
ctgctgggagcgtcgatgaaggacgcggtgctggagctcaacgcctccaatgagcgtgga
atcgacgtggtgaggaataaaatcaagatgttcgctcagcagaaggtcacactgcccaaa
ggtcgacacaaggtcatcatcctggacgaggccgacagcatgactgacggggctcagcag
gccctcaggaggatcatggagatctattccaagaccactcgcttcgctctggcctgtaac
gcctcagataagatcatcgagccgatccagtcccgctgtgcggtgctgcgttactccaag
ctgacggacgggcagatcctcgcccgcctgcaggaggtggtggagaaggagcgtctgtcg
gtgtctgacgacgggctggaggccgtcatcttcaccgcccagggagacatgagacaggcg
ttgaacaacctgcagtcgaccaactccggctttggctacataaacagcgagaacgtgttc
aaggtgtgtgatgagccccaccctctgctggtgaagagcatgctgggacactgtgtggag
gggcagatcgacgaggcctacaaggtggtggagcagctgtgggcgctgggctactcccca
gaggacatcatcggaaacatcttcagggtctgcaagaccttccaaatggccgagtacctg
aaactggagtttatcaaggagatcggctacactcacatgcgagtggctgaaggagtgaac
tctctgctgcagatggccggactcctcgggcgactgtgcagcaagacgatgacacccccc
gccagctga
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