Pleuronectes platessa (European plaice): 128442230
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Entry
128442230 CDS
T09923
Name
(RefSeq) serine/arginine-rich splicing factor 6
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03040
Spliceosome
pplt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128442230
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128442230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pplt03041
]
128442230
Spliceosome [BR:
pplt03041
]
Common components
Common spliceosomal components
SR proteins
128442230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
DbpA
RRM_5
Motif
Other DBs
NCBI-GeneID:
128442230
NCBI-ProteinID:
XP_053280547
LinkDB
All DBs
Position
6:17936681..17942012
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AA seq
386 aa
AA seq
DB search
MPRVYIGRLSYNVREKDIQRFFSGYGKLNEVDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVIVEHARGPRRDRDGQGGGYGGDRGGRGGGGDRGGGDRDGGRSSGGYSSRTHTGRE
KYGPPVRTEYRLVVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSQSDMK
RALDKLDGTDINGRKIRLVEERPRKRRSCSGSRSRSRSRRRSRSRSRRSRSRSRSRSRSH
SRSRSPINKRNQSDSRSGRKSRSKSGESKSHSRNRRSHSRSRKSKSHSRSHSPDRKSKSR
SKSRSKAKSERDSRSPSKEMAVDKKSRSRSASPVENGKEERAAKSASRSPSPREDDRRSK
SKEKRSVSRSKSRSRSRSRSRSASQD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgggtgtacatcgggcgactgagctataatgtccgcgaaaaagacatccagcga
tttttcagcggatatgggaaactcaatgaagtcgatctaaagaacggctatggattcgtg
gagtttgaagataaccgggacgccgacgatgccgtgtatgagctgaacgggaaggagctg
tgcggggagcgggtgatcgtcgaacatgcccgcggaccgcggcgagaccgagatggccag
ggtgggggttacggcggtgatagaggtggtcgcggcggcggaggcgatcgcggcggaggc
gatcgcgatggtgggcgcagcagtggtggttacagcagccggacccacactggcagggag
aagtatggacccccagtccgtactgagtatcgtctcgtcgttgagaacttgtcaagccgc
tgcagttggcaagacctaaaggacttcatgcgccaggcgggggaagttacctatgccgac
gcccacaaagagcgcaccaatgagggagtgatcgagttccgctctcaatcagacatgaag
agggcactggacaagctggacggaacagacatcaacgggcggaagattcgtcttgtggag
gaacgaccccgtaaacgaagatcctgctctggcagtcgttccagatctcgcagtcgccgc
cgctcccgtagtaggagccgaaggagcaggagtcgctccaggagtcgctccagatcccat
tcgagatctcgttcccctatcaacaagaggaatcaatccgactccagatctggaaggaag
tctcgctccaagtcaggagaaagcaaatcgcattctcgcaatcgcaggtcacactctcgt
tcccgcaaatccaaatctcattcacgctcccattcacctgaccggaaatccaagtctcgt
tctaagagccgttccaaggcaaagtcagagcgtgattctcgcagtccctcaaaggagatg
gccgttgacaagaagtcccgcagtcgatcagcttccccagtagagaacgggaaggaggag
cgtgctgccaaatctgcctcccgctccccatccccccgggaggatgaccgccgatccaag
tctaaggagaagcgctcagtctcccgctcaaagtcccgctcaagatctcgctcacgatct
agatcagcttctcaggattag
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