Pleuronectes platessa (European plaice): 128442813
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Entry
128442813 CDS
T09923
Symbol
samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128442813 (samd4a)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
128442813 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAT_SMAUG
SAM_1
Vts1
SAM_2
SAM_3
Motif
Other DBs
NCBI-GeneID:
128442813
NCBI-ProteinID:
XP_053281374
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All DBs
Position
1:complement(30821262..30874055)
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AA seq
719 aa
AA seq
DB search
MMFRDQVGVLASWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLAECTELQVLEG
EANNPGVISQWQGEPKERVISLVLTHLPLLKPGNVEAKSEYMRLLPRILAHTIEHGHHLE
ESRQLLSYALIHPATSLEDRAALALWLNHLEERAAARGDSLERPPPSGQHHLHHHQSTPP
STLTSSGSSSSTNTSSSSNLYSLHHHQRYGSDDRLNGWQSSRDSGLGGGWQQPGCENGHL
LLYPSSSVPTTINTVGTSGGGNTILTSGGGSQQHSPLKRSVSLTPPMSGPSNQPLGHVWL
SQEDLRSARGPAPDHAPLSPQSSIASSGSGGSEHLDEAGLGGLHRGCFHDEGSGMRDVPS
WLKSLRLHKYAALFSTMTYDEMMSLTEEQLEAQKVTKGARHKIVISIQKLKDRQNLLRSL
EKDVLEGSNLRAPLQELHQMIMTPIKAFPGAEEASLQRLLLSPEGKSAAPGSHLTGGGSG
EAESGASVIAEGDLPGQFTRVMGKVCTQLLVSRSDEDNISSYLQLIDKCLLHESFTETQK
KRLLSWKQQVQRLFRSIPRKTLLDIAGYRPQRSRFGQSNSLPTAGCVGGSVSVRRSLRQF
QMPSRSLPGARLGLLGSGGLLGPTPRSASSTPTGPKQGRQGLWFANPGGSNSMPSRTHSS
VQRTRSLPVHTTPQTMVMFQQADLQLPVTEPDINNRLESLCLSMTEHALGDGADRTSTI
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgtgatcaggtgggcgtcctggccagctggttcaaggggtggaacgagtgc
gagcagacggtggccctgttgtccctgctgaagagggtgagccggacccaggcccgcttc
ctgcagctgtgtctggagcactccctcgccgagtgcaccgagctgcaggtcctggaagga
gaggccaacaacccaggcgtgatcagccagtggcaaggcgagcccaaggagcgcgtcatc
tctctggtcctcacccatctcccactgctcaagcctggcaatgttgaggccaaaagcgag
tacatgcgcctgctgcctcgcatcctggcccacaccatcgagcacggccaccacctggag
gagtctcgccagctcctgtcctacgccctcatccatcctgccacctccttggaggaccgc
gctgccctggcactctggctcaaccacctggaggaaagggccgccgcccggggagactcc
ctggagaggcctcctccttctgggcagcaccacctccaccatcaccagtccacaccacca
tccaccctcacctcatcgggatcctcctcctccactaacacctcttcatcgagcaacctg
tactcgctgcatcaccaccaacgctacggctcggacgaccgcctcaacggctggcagagc
tccagggattcggggctgggaggagggtggcagcagccgggctgtgagaatgggcatctg
cttctttacccatcatcctctgtgccgaccaccatcaacacagttggaaccagtggaggt
ggaaacaccatcctgacgagtggaggaggcagtcagcagcacagtcccctgaagcgctcc
gtgtccctgacgcctcccatgagcggccccagcaaccagcccctgggccacgtctggctc
tcccaggaggacctgcggagcgccaggggcccggccccagaccacgcacccctctcgccc
cagagcagcatcgcctcctcggggagcggaggcagtgagcatctggacgaggctggtttg
ggaggtctgcatcgcggctgcttccacgacgagggcagtggcatgagggatgttccctcg
tggctgaagagtctccgtctccacaaatacgccgcgctcttttccacgatgacttacgat
gagatgatgtcgctgactgaagagcagctggaggcgcagaaagtcactaaaggagccaga
cacaagattgtcatcagcatccagaagcttaaagatcgacagaacctactgcgcagcctg
gagaaggacgtgttggagggcagcaacctgcgcgccccgctgcaggagctgcaccagatg
atcatgacgcccatcaaggctttcccaggcgccgaggaggcgtccctgcagcgcctcctc
ctgagtcccgagggcaagagcgccgcgcccggctcccacctcacagggggcggcagcggc
gaggctgagtcgggggcaagcgtcattgcagagggggatttacccggccagttcacacgc
gtcatgggcaaagtttgtacccagctactggtgtcgaggtcggacgaggacaacatcagc
tcctacctgcagctcattgacaagtgccttctccacgagtccttcaccgagacgcagaag
aagaggctgctgtcatggaagcaacaggtccagaggctgttccggtccattcccaggaag
accctcctcgacatagcagggtaccgaccgcagagaagccggttcggtcagtcgaactcc
ctccccaccgctggctgtgttgggggcagcgtgtcggtcaggaggagccttcgccagttc
cagatgccctccaggagtttgccgggtgccaggctgggcctgctgggaagcggggggctg
ctgggacccacacctcgcagcgccagcagcacgccgaccggccccaagcaggggagacag
ggtctgtggtttgccaaccccggaggaagtaacagcatgccgagccggacccacagctct
gtgcagaggacccgctccctgccggttcacaccacgccacaaaccatggtcatgttccaa
caagctgatcttcagctgcctgtgacagaaccggacatcaacaatcgccttgagtctctg
tgtctgagtatgacagagcacgccttgggagacggtgccgaccgcacatcaacaatctga
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