Pleuronectes platessa (European plaice): 128442896 Help Entry 128442896         CDS       T09923                                  Symbol col2a1a Name (RefSeq) collagen, type II, alpha 1a   KO K19719   collagen type II alpha Organism pplt  Pleuronectes platessa (European plaice) Pathway pplt04510   Focal adhesion pplt04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:pplt00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     128442896 (col2a1a)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     128442896 (col2a1a)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pplt00536]     128442896 (col2a1a) Glycosaminoglycan binding proteins [BR:pplt00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    128442896 (col2a1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Frataxin_Cyay Motif Other DBs NCBI-GeneID:  128442896 NCBI-ProteinID:  XP_053281489 LinkDB All DBs Position 6:complement(6721727..6741841) Genome browser AA seq 1418 aa AA seqDB search MFGFVDSRTVLLLVASQVVLLAVVRCQEEDDQTFGAKGQKGEPGEIADVVGPKGPAGPVG PPGEQGVRGEAGAKGDLGNSGPRGRDGEPGIPGNPGPAGPPGPPGLGGNFAAQMAGGFDE KSGGAQMGVMQGPMGPMGPRGPPGPSGAPGPQGFQGGPGEAGEPGAAGPMGPRGPSGPSG KPGSDGEAGKPGKAGERGAAGPQGARGFPGTPGLPGIKGHRGHSGLDGAKGETGAAGAKG ESGTSGENGSSGPMGPRGLPGERGRPGASGSAGARGNDGLPGPAGPPGPVGPAGAPGFPG SPGSKGEAGPTGARGTEGAQGPRGEGGTPGSPGPSGASGNPGTDGIPGSKGSAGASGISG APGFPGPRGPPGPQGATGPLGPKGQSGDPGLPGFKGETGPKGELGPSGPQGPPGPSGEEG KRGGRGEPGGAGPLGPPGERGAPGNRGFPGQDGLAGAKGALGERGVPGAAGPKGATGDNG RTGESGLPGARGLTGRPGDAGPQGKLGASGTPGEDGRPGPPGPMGARGQPGVMGFPGPKG ANGEAGKAGEKGLVGRPGLRGLSGKDGETGSSGPSGPAGPAGERGEQGMPGPSGFQGLPG PSGSPGEAGKPGDQGVSGEGGTPGAVGPRGERGFPGERGGAGSQGLQGPRGIPGTPGTDG PKGAIGPNGAAGPQGPPGLQGMPGERGAGGISGPKGDRGDNGQKGPEGAPGKDGSRGLTG PIGPPGPSGPNGAKGETGPGGATGAGGARGAPGDRGEGGPPGPAGFAGPPGSDGQPGAKG ELGESGQKGEAGSSGPQGPSGAPGPVGPTGVSGPKGARGAQGAPGSTGFPGAAGRVGSPG PNGNPGSAGPAGSSGKDGPKGARGDSGSPGRQGDPGLRGLAGTQGEKGEAGENGPPGVDG PSGPQGLGGSRGIVGLPGQRGERGFAGLPGPSGEPGKQGGTGSAGDRGPPGPVGPPGLTG PAGELGREGTPGSDGPPGRDGSVGVKGERGNTGPGGAPGAPGAPGASGPVGPLGKQGDRG ESGAQGPAGASGPAGARGMAGPQGPRGDKGEAGETGERGQKGHRGFTGLQGLPGPPGSAG DSGSAGPAGPSGSKGPPGPTGPAGKDGSNGLLGPIGPPGPRGRSGESGPSGPPGNAGPPG PPGPPGPGIDMSAFAGLGHSEKSPDPLRYMRADEASSSLRQHDVEVDSTLKSLNNQIENL RSPDGSQKNPARSCRDLKLCHPEWKSGDYWVDPNIGSTADAIKAFCNMETGQTCVYPSIA KVPKKSWWTSKSKDRKHIWFGETMNGGFHFDYAQEGPAAIAASVQLTFLRLLSNEASQNL TYHCKNSVAYMDQTTGNLKKALLLQGSNDVEIRAEGNSRFTYSVLEDGCKKHTGRWGKTV FEYKTQKTSRLPIVDIAPMDIGGADQEFGVDVGAVCFL NT seq 4257 nt NT seq  +upstreamnt  +downstreamnt atgttcggcttcgtggattcaaggactgttctgctacttgtagcatcccaggttgtttta ctcgccgtggtcagatgtcaggaggaagacgaccagacattcggtgctaagggccagaaa ggtgaaccaggagagatcgcagatgttgtaggaccaaaaggaccagccggccctgtgggc ccacctggtgagcaaggagtgcgtggagaagctggtgctaagggtgatctgggaaattct ggacctcgaggaagagatggtgagcccggcatccccggaaaccccggaccagctgggcca cccggaccaccagggctcggagggaactttgctgctcagatggctggaggcttcgacgag aagtccggaggtgctcagatgggtgtgatgcaaggaccaatgggtcctatgggtcctcgt ggtccccctggaccttccggagctcctggacctcagggattccagggtggccccggtgag gctggagagcctggtgcagcagggccaatgggaccccgtggaccatccggaccttctggg aaaccaggaagtgatggagaggctggcaaacctggcaaagctggtgagcgtggagctgca gggcctcagggcgctcgtggattccctggaactcccggacttcctggaattaaaggacac agaggtcactctggtctggatggagctaagggagagactggtgctgcaggagccaagggt gagtctggtacctctggagaaaatggttcctccggaccgatgggaccacgtggtctgcct ggtgagaggggacgtcctggagcttccggatctgcaggtgcccgtggaaatgatggcttg cccggtcctgctggtccacctggacctgttggtccagctggagctcccggtttcccagga tccccaggatccaagggagaagctggtcctactggtgcccgtggaactgagggcgcacag ggcccacgtggagagggcggtacccctggatctcctggaccttccggagcatcgggtaac cctggtactgatggtattcctggatccaagggatctgctggtgcttcaggtattagtggt gctcctggattccccggccctcgtggcccacctggaccacagggagctacaggacctctg gggccaaagggacagtctggagaccctggtcttcccggattcaaaggagaaactggaccc aagggagagcttggaccctctgggcctcaaggtccccctggcccaagtggtgaagaagga aagagaggcggcagaggagagcccggcggtgcaggaccactcggacctccaggagagaga ggagctccaggtaaccgcggtttccctggtcaggatggtcttgctggtgctaagggagcc ctgggtgaacgtggtgttcctggtgctgctgggcctaaaggtgctactggagacaatgga cgcacaggagagtccggccttcccggagccagaggtctcactggtcgtcctggagatgct ggtcctcagggcaaacttggagcctcaggaacccctggagaggacggtcgccccggccca cctggtcctatgggagcccgtggacagcccggagtgatgggattccctggacccaaggga gccaatggtgaagctggaaaggcaggagagaagggtctcgtaggtcgtcctggtctgaga ggtctgtctggaaaagatggtgagactggttcttctggaccttctgggcctgctgggcct gctggagagagaggagagcagggaatgcctggaccttctggcttccagggtctgcctgga ccatctggttccccaggagaggctggaaaacctggagaccagggtgtttctggagagggt ggaactcctggtgctgttggacctagaggtgaacgtggtttccctggtgagaggggtggt gctggatctcagggtcttcagggacctcgtggaattcctggaacacctggaactgatgga cccaagggagccattggaccaaatggtgcagctggacctcagggaccccccggcctgcag ggtatgcctggagagagaggagctggtggcatctcaggacccaagggagacagaggtgac aacggacagaagggacccgagggtgctcctggaaaggatggttctagaggtttgactggt cccattggtccacctggcccatctggaccaaacggtgccaagggtgagactggacctggt ggagctactggtgctggtggtgctcgtggtgctcctggtgaccgtggtgagggcggtcct cctggacctgctggttttgctggacctcctggttcagatggtcagcctggagccaaggga gagcttggtgagtctggacagaagggagaggctggttcttctggacctcaaggaccatct ggagctcctggacctgtgggacctactggtgtatctggacctaaaggagcacgtggtgct cagggagctcctggttccactggattccctggtgctgccggcagagttggatctcctggc cctaatggtaaccctggctctgctggtcccgctggctcttctggaaaagacggaccaaag ggtgctcgtggtgacagcggctccccaggaagacagggagaccctggtctgcgtggactt gctggcacacaaggagagaagggagaggctggagagaatggaccacctggtgttgacgga ccttcaggtcctcagggtctcggtggatcccgtggtattgttggtttgcccggtcagcgt ggagagagaggcttcgccggtctccctggaccttctggagagcctggaaaacagggaggt actggttccgctggcgaccgtggacctcctggacctgtcggaccccctggacttacagga cctgctggagagcttggaagagagggtacccctggatcagatggacctcctggtagagat ggatccgttggagtcaagggagagcgaggtaacactggtcctggtggcgcccccggagct ccaggagcccctggtgcctctggacctgtcggacctctcggcaagcagggagacagagga gagtctggcgctcaaggacctgcaggagcctctggacccgctggtgctcgaggaatggcc ggaccccaaggacctcgcggagacaagggagaggctggtgagactggagagagaggacag aagggccaccgtggcttcactggtctgcagggtctccctggacctcctggttccgctgga gattctggaagtgctggacctgcaggcccaagcggctctaagggaccacctggacccact ggacctgctggcaaagatggatctaacggtctgctcggccctattggaccgccaggacct cgtggtcgttctggagaatctggtccttctggacctcctggtaacgccgggccccccggt cctcctggtcctcctggtcctggcatcgacatgtctgcctttgccggtctgggtcattca gagaagtcccctgatcctctcaggtacatgagggccgatgaggcctccagctccctgagg cagcacgatgttgaggtcgattccacactcaagtccctcaacaaccagattgagaacctg cgcagccccgacggctcccagaagaaccctgctcgctcctgcagggacctgaaactgtgc caccctgagtggaagagcggtgattactgggttgatcccaacattggcagcaccgccgac gccatcaaggccttctgcaacatggagactggacagacctgcgtctacccaagcatcgcc aaggtgcccaagaagagctggtggaccagcaagagcaaggaccgcaaacacatctggttc ggagagaccatgaatggaggattccactttgactacgcccaggagggccctgctgccatc gctgcaagcgtccagctgaccttcttgaggcttctgtccaatgaagcttcccagaatctc acttaccactgcaagaacagcgttgcctacatggaccagaccacaggcaacctgaagaag gctttgctgctgcagggctccaacgatgtggagatccgcgcagagggcaacagtcgcttc acgtacagtgtgttggaggatggctgcaagaaacacacaggccggtggggcaagactgtc tttgagtacaaaacacagaagacctcccgtctgccaatcgtagacattgctcctatggac atcggaggagcggatcaggagtttggagtggatgtaggcgcagtctgcttcttgtaa

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