KEGG   Pleuronectes platessa (European plaice): 128442941
Entry
128442941         CDS       T09923                                 
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b isoform X1
  KO
K14966  host cell factor 1
Organism
pplt  Pleuronectes platessa (European plaice)
Pathway
pplt03083  Polycomb repressive complex
pplt04980  Cobalamin transport and metabolism
pplt05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    128442941 (hcfc1b)
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    128442941 (hcfc1b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128442941 (hcfc1b)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pplt01009]
    128442941 (hcfc1b)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pplt03036]
    128442941 (hcfc1b)
   03029 Mitochondrial biogenesis [BR:pplt03029]
    128442941 (hcfc1b)
Protein phosphatases and associated proteins [BR:pplt01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     128442941 (hcfc1b)
Chromosome and associated proteins [BR:pplt03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     128442941 (hcfc1b)
   HMT complexes
    COMPASS/SET1 complex
     128442941 (hcfc1b)
    MLL-HCF complex
     128442941 (hcfc1b)
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     128442941 (hcfc1b)
Mitochondrial biogenesis [BR:pplt03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    128442941 (hcfc1b)
SSDB
Motif
Pfam: Kelch_3 Kelch_4 Kelch_5 Kelch_1 Kelch_6 Kelch_2 fn3
Other DBs
NCBI-GeneID: 128442941
NCBI-ProteinID: XP_053281563
LinkDB
Position
6:complement(1643291..1653713)
AA seq 1535 aa
MASNPAVLQPRWKRVAGWTGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTATN
QWFIPSVCGDVPPGCAAYGFVCDGTRLLVFGGMVEYGKYSSDLYELQASRWEWKRLKAKA
PKNGPPPCPRLGHSFSLIGSRCYLFGGLANDSEDPKNNIPRYLNDLYCLELRPGSSVVGW
EVPLTSGPPPPPRESHTAVVTSGRGENRLIIYGGMSGCRLGDLWVLDIDTLTWTKPGLSG
TAPVPRSLHSATAINNKMYVFGGWVPLVMDDVQEATHEKEWKCTNTLACLNLDNMCWDTV
LMDVLEESVPRARAGHCSVSINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETERPCPPSR
VQLVRANTSSLEVSWGPSQTADMYLLQLQKYDIPATPASSPAPNPVPTATPAVSSPKSPA
PAAVASTNQSVTLVPSQILSIPGSPLAAAAKAPAVLKVAAAPGSVGGASIVTVRQATPKS
PAAVTTLPAGVRMVVPSPSGQAMPIGSSPQMSGMAALAAAAASTQKIPPSSAAGGLNVPA
GATIVKTVTGSPGPSSLPIKVASPVTMVTSSATRMLKTAAAQVGGASGVSTPGTPSRPVI
TVHKSGTVTVSQQAQVVTTVVGGVTKTFTLVNSPLGVGGGGALINNLGKVLSVVQTKPGA
VTGQAGSSSIAQMIQKGALPAGTILKLVTSADGKQKTILSTVQAGSTASKPSVLGVSPTA
GKPGTTFIKTIPVSALHGAAGGNSPFTILTTKGVSPGTMGKIITTVPKITAGGQQGVTQV
VLKGAPGVPGTILRTVPMSGVRLVSPGSKPSVATLVVKSTTAGVSTLGTVTGSVSTTLAG
GAIGSANASLATPITTLTTIAALASQVTKATAAAVPTQVTLITTPSGAEAQPLVQDLPVS
IMASPTSEEPGSGTSTTTVEETTDTETAVMSICSNPPCETHETGTTNTSTVATATMGGGD
RVCSNPPCETHETGTTNTSTVATATMGGGDRVCSNPPCETHETGTTNTSTVASSNMSQAL
QVCSNPPCETHETGTTNTSTTATAQQGGDVLQVDTTDPTSSSDPPSSTANRNRAVTMVTQ
ATPTPGPSIPMISSLVKEDRVESSETEAVAMVTGEEPEPTDSQSEAVSLQVHMEVSKTAA
QVATTDLPQELMSSEGDVGEVVPGTTTMMLTTRLTPDQLTAQQATIQAVLQAAGHIGGAA
NSVDQSVPIILTQQELAALVQQQQQLQDAHAHTEPPPSSLPTEGLAPADSLNDPAAELTS
SAVTSAVARLASTFSPAPPLTSGVAKIQAAATVTEATNGIAATKEQPSAEVKTSVRSSRW
YDVGVVKVTNMVVSHFYIPHDDNMAEDDSGVVPDYSQMRKVELQPGTAYKFRVAGINICG
RGAFSEVSAFKTCLPGFPGAPCAIKISKNLDGAQLTWEPPAVTWGTITEYSVYLAIQSSH
AASAVSGPAQLAFMRVYCGTSPSCLVQASSLANAHIDYTTKPAVIFRIAARNQKGYGPAT
QVRWLQENKDTKTTVKRGGTTQPKPVGPKKFKTDQ
NT seq 4608 nt   +upstreamnt  +downstreamnt
atggcatccaacccagcggtgctacagccccgctggaagcgcgtcgcgggctggaccggc
ccggtaccgcggccccggcacggacaccgagctgtggccatcaaggagctgatggttgtg
ttcggcggagggaacgaggggatcgtggacgagctgcacgtctacaacacagccaccaac
cagtggttcatcccgtcggtctgtggagatgtcccccctggctgtgccgcctatggcttt
gtgtgtgacgggacgaggctgttggtgtttggcgggatggtggaatacgggaaatacagc
agcgacctgtacgagctgcaggcgagtcgctgggagtggaaacgtctcaaggccaaggct
ccaaagaacggcccgcccccctgccctcgcctcggacacagcttctctttgattgggagc
cgctgttaccttttcggaggcctggccaatgacagcgaggatcccaagaacaacatcccc
cggtatctgaacgacctgtactgtctggagctgcgcccagggtccagcgtggtcggctgg
gaggtcccactgacctcaggtccgccaccgccgcccagagagagtcacacggcggtggtg
acgagcggccgcggagaaaacagactgatcatctatggagggatgagcggctgtagactg
ggcgacctgtgggtccttgacatagacactctgacctggaccaaaccaggcctcagtggg
accgcccccgtccctcgcagcctccactcggccactgccatcaacaacaagatgtatgta
tttggaggttgggttcctctggtgatggatgatgtccaagaggcgactcatgagaaggag
tggaagtgcaccaacacactggcctgcctcaacctggacaacatgtgttgggacacagtc
ctgatggatgttctggaggagtctgtccccagagctcgagcaggtcattgtagcgtctcc
atcaactccagactctacgtctggagcggcagagacggatacaggaaggcctggaacaat
caggtgtgctgcaaggacctgtggtacctggagacagagcgtccctgtcctccctctcgg
gtgcagctggtccgggccaacacgtcgtctctggaggtgagttggggtccgtctcagaca
gcggacatgtacctgctgcagctgcagaagtacgacattcccgccacacctgcatccagc
cccgcccccaaccccgtgcccacggccacacctgcagtcagctcccccaagagccccgcc
cccgctgcagtggcatcgaccaaccagtccgtcacgctggtcccctcccaaatcctctcc
attcctggaagcccattggctgctgctgcgaaagcaccagctgtcctgaaggtggcagca
gctccaggttcagtgggtggagcctccattgtcacagtgagacaggctacacctaaatcc
ccagctgccgtgacaacgcttcctgcaggcgtccgcatggtggtaccttctccatccgga
caggcgatgccaataggcagcagtcctcagatgagtggcatggcggcgttggcagcggcg
gctgcatcgactcagaagatccccccctcgtccgcggcgggggggctgaatgtcccggct
ggagccacgatcgtgaagacggtgaccgggagtccgggacccagcagcctgccaatcaaa
gtggcctctcctgttaccatggtgaccagctcggccactcggatgttaaagaccgctgcc
gctcaggtgggcggggcctcaggtgtctcaactcctggcaccccgagccgaccggtcatc
acagtccataagtccgggacagtgactgtctcccaacaagctcaggtggtcaccacagtg
gtgggcggagtcacaaagaccttcactctcgtgaacagtccactcggtgtgggaggaggc
ggggctctgatcaacaacctgggaaaagtgttgtcagtggttcagaccaaaccaggagct
gttactggtcaggctgggagcagctccatcgctcagatgatccagaagggcgctctcccg
gcaggaaccatcttgaagctggtgacgtctgcagacggtaagcagaagaccatcctcagc
accgtgcaggcaggatccacggcctccaagcccagcgtcctcggtgtctccccgacagcc
ggcaaacctggaaccaccttcatcaaaaccatcccagtgtcggcgctgcacggcgctgca
ggtggaaacagtccattcaccatcctcaccactaaaggggtatcgccaggaactatgggt
aaaatcatcaccacagtccccaagatcactgcaggaggtcaacagggggtcacacaggtg
gtgttaaagggagctccaggtgtacctggtaccatcctcaggactgttcccatgagcgga
gtcagactggtctcacctggatccaaacctagtgttgccactctggtggtcaagtcaacc
acagcaggtgtgtccactctggggacagtaacaggaagtgtctccaccacgctggcaggt
ggagccattggttctgccaacgcctccctggcgacgcccatcaccaccctgacgaccatt
gctgcacttgccagccaggttaccaaggcaaccgctgcagcggtacccacacaggtgact
ctgatcacaactccgagcggagctgaagctcagccactggtccaggatctgcccgtctcc
atcatggcatctcctacatcagaagaacccggaagtggtacaagtactacgacggtagaa
gagactacagacactgagacagcagtgatgtccatctgctccaacccgccgtgtgagacc
cacgagacggggacgaccaacacctccactgtcgcaacagcaaccatgggggggggggac
agagtgtgctccaacccgccgtgtgagacccacgagacggggacgaccaacacctccact
gtcgcaacagcaaccatgggggggggggacagagtgtgctccaacccgccgtgtgagacc
cacgagaccgggacgaccaacacctccactgtcgcctcctccaacatgagccaggcacta
caggtttgttcaaatcctccgtgtgagactcacgagaccggaaccaccaacacatcgacc
acagcaacagctcaacagggcggagacgttcttcaggtggacaccacggaccccaccagc
tcttctgaccccccctcctccacagccaatcgcaacagagctgttaccatggttacacag
gcaacgcccactcccggaccatccatacctatgatctcctctttggtcaaagaagacaga
gttgagtcctcagagacagaggctgtcgccatggttacaggggaggagcctgagccgaca
gacagccaatcagaggctgtaagtttacaggttcacatggaggtcagcaagacagctgca
caggtggcgaccacagaccttcctcaggagctgatgtcatcagaaggggacgtaggtgag
gtggtccctgggaccactaccatgatgttgacaacaagactgaccccagatcagctgact
gctcagcaggcaacaatacaggcagtactgcaggcagctggacacataggtggagcagcg
aactctgtggatcaatctgtcccgatcattttgactcagcaggaactggcagctctggtt
caacaacagcagcagctacaggacgcccacgcccacaccgagccgccgcccagcagcctg
cccacagagggccttgctccagcagacagcctcaatgacccggcagcagagctgacctca
tcggcagtgaccagcgctgtcgccagattagccagcacgttcagccccgcccccccgctg
acatcaggtgtggcaaagattcaagctgctgccacagtgactgaggcgaccaatggcatc
gcagcgaccaaagagcagccgagtgctgaggtgaagacttcggtgaggagcagtcgatgg
tacgacgttggcgtcgttaaagttacaaacatggtggtgtctcacttctacatcccacat
gacgacaacatggccgaagacgactcaggtgtggtacctgactacagtcagatgaggaag
gtggagctgcagccagggacagcctataagtttcgtgttgctgggatcaatatctgcggc
cgtggagcgttctccgaggtgtctgcatttaaaacatgtctgccgggtttccctggagcg
ccatgtgccatcaagatcagcaagaacctggacggggctcagctcacctgggagcctccg
gctgtcacgtggggcacgatcacggagtactcggtgtacctcgccatccagtccagccat
gccgcctcagctgtttcaggcccggcacagctggccttcatgagggtgtactgtggtacc
agcccgtcctgcctggtccaggcctcaagcctcgccaacgcacacatcgactacaccacc
aagccagccgtcatcttccgcatcgctgcacgcaatcagaagggctatgggccggccacc
caggtcaggtggttacaagaaaataaagacacaaaaacaacagtgaagagaggaggaact
acacaaccgaaacccgtcggaccaaagaaattcaaaacggaccaatag

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