Pleuronectes platessa (European plaice): 128442941
Help
Entry
128442941 CDS
T09923
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b isoform X1
KO
K14966
host cell factor 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03083
Polycomb repressive complex
pplt04980
Cobalamin transport and metabolism
pplt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128442941 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
128442941 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128442941 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pplt01009
]
128442941 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pplt03036
]
128442941 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
pplt03029
]
128442941 (hcfc1b)
Protein phosphatases and associated proteins [BR:
pplt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128442941 (hcfc1b)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
128442941 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
128442941 (hcfc1b)
MLL-HCF complex
128442941 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
128442941 (hcfc1b)
Mitochondrial biogenesis [BR:
pplt03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
128442941 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_4
Kelch_5
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
128442941
NCBI-ProteinID:
XP_053281563
LinkDB
All DBs
Position
6:complement(1643291..1653713)
Genome browser
AA seq
1535 aa
AA seq
DB search
MASNPAVLQPRWKRVAGWTGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTATN
QWFIPSVCGDVPPGCAAYGFVCDGTRLLVFGGMVEYGKYSSDLYELQASRWEWKRLKAKA
PKNGPPPCPRLGHSFSLIGSRCYLFGGLANDSEDPKNNIPRYLNDLYCLELRPGSSVVGW
EVPLTSGPPPPPRESHTAVVTSGRGENRLIIYGGMSGCRLGDLWVLDIDTLTWTKPGLSG
TAPVPRSLHSATAINNKMYVFGGWVPLVMDDVQEATHEKEWKCTNTLACLNLDNMCWDTV
LMDVLEESVPRARAGHCSVSINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETERPCPPSR
VQLVRANTSSLEVSWGPSQTADMYLLQLQKYDIPATPASSPAPNPVPTATPAVSSPKSPA
PAAVASTNQSVTLVPSQILSIPGSPLAAAAKAPAVLKVAAAPGSVGGASIVTVRQATPKS
PAAVTTLPAGVRMVVPSPSGQAMPIGSSPQMSGMAALAAAAASTQKIPPSSAAGGLNVPA
GATIVKTVTGSPGPSSLPIKVASPVTMVTSSATRMLKTAAAQVGGASGVSTPGTPSRPVI
TVHKSGTVTVSQQAQVVTTVVGGVTKTFTLVNSPLGVGGGGALINNLGKVLSVVQTKPGA
VTGQAGSSSIAQMIQKGALPAGTILKLVTSADGKQKTILSTVQAGSTASKPSVLGVSPTA
GKPGTTFIKTIPVSALHGAAGGNSPFTILTTKGVSPGTMGKIITTVPKITAGGQQGVTQV
VLKGAPGVPGTILRTVPMSGVRLVSPGSKPSVATLVVKSTTAGVSTLGTVTGSVSTTLAG
GAIGSANASLATPITTLTTIAALASQVTKATAAAVPTQVTLITTPSGAEAQPLVQDLPVS
IMASPTSEEPGSGTSTTTVEETTDTETAVMSICSNPPCETHETGTTNTSTVATATMGGGD
RVCSNPPCETHETGTTNTSTVATATMGGGDRVCSNPPCETHETGTTNTSTVASSNMSQAL
QVCSNPPCETHETGTTNTSTTATAQQGGDVLQVDTTDPTSSSDPPSSTANRNRAVTMVTQ
ATPTPGPSIPMISSLVKEDRVESSETEAVAMVTGEEPEPTDSQSEAVSLQVHMEVSKTAA
QVATTDLPQELMSSEGDVGEVVPGTTTMMLTTRLTPDQLTAQQATIQAVLQAAGHIGGAA
NSVDQSVPIILTQQELAALVQQQQQLQDAHAHTEPPPSSLPTEGLAPADSLNDPAAELTS
SAVTSAVARLASTFSPAPPLTSGVAKIQAAATVTEATNGIAATKEQPSAEVKTSVRSSRW
YDVGVVKVTNMVVSHFYIPHDDNMAEDDSGVVPDYSQMRKVELQPGTAYKFRVAGINICG
RGAFSEVSAFKTCLPGFPGAPCAIKISKNLDGAQLTWEPPAVTWGTITEYSVYLAIQSSH
AASAVSGPAQLAFMRVYCGTSPSCLVQASSLANAHIDYTTKPAVIFRIAARNQKGYGPAT
QVRWLQENKDTKTTVKRGGTTQPKPVGPKKFKTDQ
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaacccagcggtgctacagccccgctggaagcgcgtcgcgggctggaccggc
ccggtaccgcggccccggcacggacaccgagctgtggccatcaaggagctgatggttgtg
ttcggcggagggaacgaggggatcgtggacgagctgcacgtctacaacacagccaccaac
cagtggttcatcccgtcggtctgtggagatgtcccccctggctgtgccgcctatggcttt
gtgtgtgacgggacgaggctgttggtgtttggcgggatggtggaatacgggaaatacagc
agcgacctgtacgagctgcaggcgagtcgctgggagtggaaacgtctcaaggccaaggct
ccaaagaacggcccgcccccctgccctcgcctcggacacagcttctctttgattgggagc
cgctgttaccttttcggaggcctggccaatgacagcgaggatcccaagaacaacatcccc
cggtatctgaacgacctgtactgtctggagctgcgcccagggtccagcgtggtcggctgg
gaggtcccactgacctcaggtccgccaccgccgcccagagagagtcacacggcggtggtg
acgagcggccgcggagaaaacagactgatcatctatggagggatgagcggctgtagactg
ggcgacctgtgggtccttgacatagacactctgacctggaccaaaccaggcctcagtggg
accgcccccgtccctcgcagcctccactcggccactgccatcaacaacaagatgtatgta
tttggaggttgggttcctctggtgatggatgatgtccaagaggcgactcatgagaaggag
tggaagtgcaccaacacactggcctgcctcaacctggacaacatgtgttgggacacagtc
ctgatggatgttctggaggagtctgtccccagagctcgagcaggtcattgtagcgtctcc
atcaactccagactctacgtctggagcggcagagacggatacaggaaggcctggaacaat
caggtgtgctgcaaggacctgtggtacctggagacagagcgtccctgtcctccctctcgg
gtgcagctggtccgggccaacacgtcgtctctggaggtgagttggggtccgtctcagaca
gcggacatgtacctgctgcagctgcagaagtacgacattcccgccacacctgcatccagc
cccgcccccaaccccgtgcccacggccacacctgcagtcagctcccccaagagccccgcc
cccgctgcagtggcatcgaccaaccagtccgtcacgctggtcccctcccaaatcctctcc
attcctggaagcccattggctgctgctgcgaaagcaccagctgtcctgaaggtggcagca
gctccaggttcagtgggtggagcctccattgtcacagtgagacaggctacacctaaatcc
ccagctgccgtgacaacgcttcctgcaggcgtccgcatggtggtaccttctccatccgga
caggcgatgccaataggcagcagtcctcagatgagtggcatggcggcgttggcagcggcg
gctgcatcgactcagaagatccccccctcgtccgcggcgggggggctgaatgtcccggct
ggagccacgatcgtgaagacggtgaccgggagtccgggacccagcagcctgccaatcaaa
gtggcctctcctgttaccatggtgaccagctcggccactcggatgttaaagaccgctgcc
gctcaggtgggcggggcctcaggtgtctcaactcctggcaccccgagccgaccggtcatc
acagtccataagtccgggacagtgactgtctcccaacaagctcaggtggtcaccacagtg
gtgggcggagtcacaaagaccttcactctcgtgaacagtccactcggtgtgggaggaggc
ggggctctgatcaacaacctgggaaaagtgttgtcagtggttcagaccaaaccaggagct
gttactggtcaggctgggagcagctccatcgctcagatgatccagaagggcgctctcccg
gcaggaaccatcttgaagctggtgacgtctgcagacggtaagcagaagaccatcctcagc
accgtgcaggcaggatccacggcctccaagcccagcgtcctcggtgtctccccgacagcc
ggcaaacctggaaccaccttcatcaaaaccatcccagtgtcggcgctgcacggcgctgca
ggtggaaacagtccattcaccatcctcaccactaaaggggtatcgccaggaactatgggt
aaaatcatcaccacagtccccaagatcactgcaggaggtcaacagggggtcacacaggtg
gtgttaaagggagctccaggtgtacctggtaccatcctcaggactgttcccatgagcgga
gtcagactggtctcacctggatccaaacctagtgttgccactctggtggtcaagtcaacc
acagcaggtgtgtccactctggggacagtaacaggaagtgtctccaccacgctggcaggt
ggagccattggttctgccaacgcctccctggcgacgcccatcaccaccctgacgaccatt
gctgcacttgccagccaggttaccaaggcaaccgctgcagcggtacccacacaggtgact
ctgatcacaactccgagcggagctgaagctcagccactggtccaggatctgcccgtctcc
atcatggcatctcctacatcagaagaacccggaagtggtacaagtactacgacggtagaa
gagactacagacactgagacagcagtgatgtccatctgctccaacccgccgtgtgagacc
cacgagacggggacgaccaacacctccactgtcgcaacagcaaccatgggggggggggac
agagtgtgctccaacccgccgtgtgagacccacgagacggggacgaccaacacctccact
gtcgcaacagcaaccatgggggggggggacagagtgtgctccaacccgccgtgtgagacc
cacgagaccgggacgaccaacacctccactgtcgcctcctccaacatgagccaggcacta
caggtttgttcaaatcctccgtgtgagactcacgagaccggaaccaccaacacatcgacc
acagcaacagctcaacagggcggagacgttcttcaggtggacaccacggaccccaccagc
tcttctgaccccccctcctccacagccaatcgcaacagagctgttaccatggttacacag
gcaacgcccactcccggaccatccatacctatgatctcctctttggtcaaagaagacaga
gttgagtcctcagagacagaggctgtcgccatggttacaggggaggagcctgagccgaca
gacagccaatcagaggctgtaagtttacaggttcacatggaggtcagcaagacagctgca
caggtggcgaccacagaccttcctcaggagctgatgtcatcagaaggggacgtaggtgag
gtggtccctgggaccactaccatgatgttgacaacaagactgaccccagatcagctgact
gctcagcaggcaacaatacaggcagtactgcaggcagctggacacataggtggagcagcg
aactctgtggatcaatctgtcccgatcattttgactcagcaggaactggcagctctggtt
caacaacagcagcagctacaggacgcccacgcccacaccgagccgccgcccagcagcctg
cccacagagggccttgctccagcagacagcctcaatgacccggcagcagagctgacctca
tcggcagtgaccagcgctgtcgccagattagccagcacgttcagccccgcccccccgctg
acatcaggtgtggcaaagattcaagctgctgccacagtgactgaggcgaccaatggcatc
gcagcgaccaaagagcagccgagtgctgaggtgaagacttcggtgaggagcagtcgatgg
tacgacgttggcgtcgttaaagttacaaacatggtggtgtctcacttctacatcccacat
gacgacaacatggccgaagacgactcaggtgtggtacctgactacagtcagatgaggaag
gtggagctgcagccagggacagcctataagtttcgtgttgctgggatcaatatctgcggc
cgtggagcgttctccgaggtgtctgcatttaaaacatgtctgccgggtttccctggagcg
ccatgtgccatcaagatcagcaagaacctggacggggctcagctcacctgggagcctccg
gctgtcacgtggggcacgatcacggagtactcggtgtacctcgccatccagtccagccat
gccgcctcagctgtttcaggcccggcacagctggccttcatgagggtgtactgtggtacc
agcccgtcctgcctggtccaggcctcaagcctcgccaacgcacacatcgactacaccacc
aagccagccgtcatcttccgcatcgctgcacgcaatcagaagggctatgggccggccacc
caggtcaggtggttacaagaaaataaagacacaaaaacaacagtgaagagaggaggaact
acacaaccgaaacccgtcggaccaaagaaattcaaaacggaccaatag
DBGET
integrated database retrieval system