Pleuronectes platessa (European plaice): 128443135
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Entry
128443135 CDS
T09923
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128443135
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pplt03310
]
128443135
Transcription factors [BR:
pplt03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128443135
Nuclear receptors [BR:
pplt03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
128443135
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
MIOS_a-sol
Motif
Other DBs
NCBI-GeneID:
128443135
NCBI-ProteinID:
XP_053281875
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Position
1:complement(31390613..31408313)
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AA seq
489 aa
AA seq
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MYFIISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCL
IDRTSRNRCQHCRLQKCLTVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQQQQQQG
PLLMSHPSLNSPSPGDAEPLSPQYGLSSSGLTELPDELGGYMEQNSPEGGSVSSKTDSGG
EGGGGLFYLDIQPSPDQSGLDINGIKPEPLCDYGSRNGFFPYCSFTNGDTSPSESMTELD
HLVQIISKSHLETCQYLREELQQMSWQNFLQDEVQSYQSKPREVMWQLCAVKITEAIQYV
VEFAKRIDGFMDLCQNDQIVLLKAGSLEVVLVRMCRVFDSQHNTVYFDGKFAGPDVFRAL
GCDDLITSVFDFAKSLCSLHLMEDELALFSAFVLLSADRSWLQEKLQVEKLQQKTELALQ
HVLQKNHRGDTVMNKLRCKVAALRSLCSRHSEKLTAFRTVYPDVVRTHFPPLYKELFGAD
LEVTPQADD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtactttatcatttctgccatgaaagctcagattgaaatcattccctgtaaaatctgt
ggagacaaatcttcagggattcactacggggttatcacctgtgagggctgtaagggtttc
ttcagacgcagtcagcagagtaacgccacctactcgtgtcctcgccagaaaaactgtctg
atcgaccgaacgagccgaaaccgctgccagcactgccgtctgcagaaatgtctgactgtg
ggcatgtcccgagacgcggtgaagttcggtcgcatgtcgaagaagcagcgggacagtttg
tacgctgaggttcagaaacaccggctccagcagcagcagcagcagcagcagcagcagggg
cccctcctcatgtcccaccccagcctcaacagcccgagccccggggacgccgagccgctc
tccccccaatacggcctctcctccagcggcctcactgagctccctgatgaactcgggggc
tacatggagcagaactcccccgaaggaggatccgtctcatccaagacggactctggaggt
gagggaggaggaggattgttctacctggacattcagccctcacccgaccaatcaggactg
gatattaacggcatcaaaccggagccactgtgcgactacgggtccagaaacggcttcttc
ccatactgctccttcaccaatggagacacgtcgcccagcgagtccatgaccgaactggat
catctggtccagatcatctccaaatctcacctggagacgtgtcagtacctgagggaggag
ctgcagcagatgagctggcagaacttcctgcaggacgaggtgcagagttaccagagcaag
ccgagggaggtgatgtggcagctctgtgccgtaaagatcaccgaggccatccagtatgtg
gtggagttcgccaaacgcatcgacggcttcatggatctctgccagaatgatcagatcgtg
ctgttgaaagctggatctctggaggtcgtcctcgtccggatgtgtcgagtgtttgactcg
cagcacaacaccgtttactttgatgggaagtttgcaggtcctgacgtcttcagagcgtta
ggttgtgatgatttgatcacatcggtgtttgactttgctaagagcttgtgttcactgcac
ctgatggaggacgagcttgctctcttctcagcgttcgttctgctctcggcagaccgctct
tggctgcaggagaagctgcaggtggagaagctgcagcagaaaactgagttggctctgcaa
cacgtcctgcagaagaaccacagaggagacacagttatgaacaagctcagatgtaaagtg
gcagcgctgcgttcgctgtgcagtcggcactcagagaaactgacggcgttcagaaccgtt
taccccgacgtggtacggacgcacttccctcctctttacaaggagctgtttggtgctgac
ctcgaagtgacgccacaggccgatgactga
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