Pleuronectes platessa (European plaice): 128443146
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Entry
128443146 CDS
T09923
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128443146 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128443146 (hnrnpa1b)
03041 Spliceosome [BR:
pplt03041
]
128443146 (hnrnpa1b)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128443146 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
128443146 (hnrnpa1b)
Spliceosome [BR:
pplt03041
]
Common components
Common spliceosomal components
hnRNP proteins
128443146 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
128443146
NCBI-ProteinID:
XP_053281898
LinkDB
All DBs
Position
6:complement(12238350..12241560)
Genome browser
AA seq
347 aa
AA seq
DB search
MSMKDVPREPEQLRKLFIGGLSFETTDESLRAHFEKWGSLTDCVVMRDPNTKRSRGFGFV
TYSQVQEVDEAMNDRPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEECH
LRDYFQQFGKIEVIDIMTDRATGKKRGFAFVTFDDHDSVDRIVIQKYHTVNSHNCEVRKA
LTKQEMQTAGMGMRGRSSGGGRPYEYDRGFNQGGRGGGGGGGGRYGDAPYNCNGGDGGYG
GGPSGPGGYNNGGNRGYNQGGYNQGGGGGGGGYGGNGYDSNGYGNCGGGGGGGGGNYNNM
GHYDPQASNFGPMKNNFGGGGGGGSSGRNFGGYGGGSNSGYGRPGRF
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgaaagatgtcccgcgtgagccggagcagctccgcaagctgtttatcggaggt
ctgagcttcgagacaacagacgagagtctccgagctcatttcgagaaatggggcagcctc
acagactgtgtggtcatgagggaccccaacaccaagcgatccaggggctttggatttgtc
acatactcacaggtgcaagaagtggatgaagccatgaacgatcgcccccataaggttgat
gggcgtgtggtggagcctaaacgagccgtatctagagaggattcaaaccgaccaggtgct
cacgtaacggtaaagaaaatctttgttggaggcatcaaggaagatacggaggagtgtcac
ctgcgggattacttccagcagtttggcaagatcgaggtcattgacatcatgactgatcgt
gctacggggaaaaagaggggctttgcctttgtcacgtttgatgaccacgattcagtcgac
cggattgtcatccagaagtatcacacggtgaacagccacaactgtgaagtcaggaaggcc
cttacgaagcaagagatgcagacagcaggcatgggtatgaggggtcgcagcagtggtggt
ggaaggccatacgagtatgaccggggcttcaatcaaggtggcaggggcggtggtggtggt
ggtggtggtagatacggagatgctccttacaattgcaatggcggggacggtggctatgga
ggtggccctagcggtcctggtggatataacaatggcggcaaccgtggatacaatcaagga
ggctacaaccagggcggaggtggtggcggaggaggatatggaggaaacggatatgacagc
aatggctatggaaactgtggtggtggaggaggtggcggcggcggcaactacaacaacatg
gggcactacgacccccaggcgtccaacttcggcccaatgaagaacaactttggtggtggt
ggcggcggcggcagcagtggtaggaacttcggtggctacggaggtggctccaacagtgga
tatggccgtcctggacgattttaa
DBGET
integrated database retrieval system
