Pleuronectes platessa (European plaice): 128443303
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Entry
128443303 CDS
T09923
Name
(RefSeq) LIM domain only protein 7
KO
K06084
F-box protein 20
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128443303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128443303
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128443303
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
DUF4757
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
128443303
NCBI-ProteinID:
XP_053281982
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All DBs
Position
1:complement(22755997..22783179)
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AA seq
1241 aa
AA seq
DB search
MEWRQQTSVSCAHAFNEAQRWIQVVTGKLFGCSDFRAALENGVLLCDLINQLKPGIIKRV
NRLSTPIAGLDNVNVFLKACGKLGLNESQLFHPGDLQDLSTRVTLRRDESSRRLKNVLIT
IYWLGRKAHLDAFYSGPQLNFKAFEGLLGLALSKSLDECWYPEREEPQRMRRSYKRENSV
DCVDSPDSRPLRQNSEGWGSDAEAEQVFRMETSQHPVHQTRGHIPQPLLRRKQRREEIGS
DGPLTRAYHNQVRPETPVQVNPGWIWSKSLSDIPMFYPVRKLPKQNTGHDGGQDADTAEE
WQQEDAETGSVPGKESDAQWQDDLTKWKNRRRSSNTDHRRKSLDREHVINACSLSMTNRA
VSNSKNDTQRGAMLKRDQPPPHRCNPAPRLHSTAPPSKSSSSDLRPHTRALLSRGYATEA
PYRPRVTLITYNSASTQGSLVGAMPASDGTILGEETHFPSLASEGAGATTPSVDFPFSSQ
TQVKAQGRPAPLQPTSEPAQPQNVPINKISTLVTTLQPKEATKSTCTASMLNHKELPPCI
DPAVPTFGAAPVNQTSLEDTSQEGILKKTREPAEKTAATYKYLSRTVSWSGSASLPRGYR
RSEGSSRLSSSITARPFGTKQSRMSSLPRLCTVDGSGLQLNSETEKCLYPPTKSSLKRQT
AASHLRTSLRLKKTSQMKPILSTQSSLKTNGFHHQPCTQTQPLPYSTLQAEHYNSSTLPT
TTKVDHSNMRVSLTLKPKRVPDFGLETHWDSTGARVKFIQPGSPAELCQLRVDDEIVAFD
GVAVAHMNYNQWKDRMASALQTGNLSMDIRRYGNKDWSSSEGDHPDQPGRSRMTLNLTAA
APGLIGCPDHHANRTASTETAALKLNGHKGSVEQGEVLDGGSAEGHSTAKSKDVNIMIRN
NQKRRAEFFRQRGGSESAISDLQVPSLSPSSSSWSWDREEDRRRQEKWQEEQERLLQEQY
QRDQERLEAEWRRAQQDATGDLCRKSVQTTFQMTNGGAGPARTQLHVNALSTRAAGEEQR
PDGDELNESGRKPQSDARGQQREAIAEQDWAVESCGFAQLSTAHRAKSLSSPALAGSHKQ
TRGDQRKRKGQSLCKSEQDRQQILEEMKKRTQLLRDNSWIRPRRSSFPKEPVYGVDPLKR
YESLDDLDALRHPPVSSATFGFPRPHSAAGSCAPSRNCSSRYSTGAILSRKYVSMDPVHH
GSVWAAADVSEELNLESRFEPANGNPTVSYDQVQYTGSSYM
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgtcagcagaccagtgtcagctgtgcacacgcgttcaacgaggcccagcgc
tggatccaggtggtgactggaaagttgtttggttgcagtgacttccgagctgccttggag
aatggagtcctgctctgcgatttgatcaaccagttgaaacccggcatcataaaaagagta
aacaggctgtccactcccatcgctggcctggacaatgtgaacgtgttcctgaaagcctgc
gggaaactgggactgaacgagtcccagctgtttcatccaggagacctgcaagacctgtcc
actcgcgtcactctcagacgcgatgaaagcagcagaagactgaaaaatgttctgatcacc
atctactggttgggccgcaaagctcacctggacgcgttctacagtggacctcagctcaac
ttcaaggcctttgaaggactcttaggtttggccttgtctaagtccctagacgagtgctgg
tacccggagagggaggaacctcagcgtatgagacggagctataagagggagaactctgtg
gactgtgttgactcaccggactcccggcccctccgccaaaacagtgaaggttggggaagt
gatgcagaagctgagcaggtcttcagaatggagacctcacagcacccagtccatcagact
aggggtcatatcccgcaaccacttctacggagaaagcagagacgagaggagattggaagc
gacggtccactcaccagagcatatcacaaccaggtcaggcctgagactcccgttcaggtc
aaccctggctggatctggagtaaatctctcagcgacatcccgatgttctaccctgtgcgt
aaactccccaagcagaacaccggtcacgatgggggccaggacgctgacacggcagaggag
tggcagcaagaagacgcagagacgggcagcgttcccggcaaggagagcgacgctcagtgg
caggatgacttgacaaagtggaagaatcgtcgccggagctccaacacagaccaccgcagg
aagtcgctggaccgagagcatgtgatcaacgcctgctctctgtccatgaccaatagggcc
gtgagcaactctaagaacgacacccaacgcggcgcgatgctaaagagagaccagccgcca
ccacacaggtgtaaccccgccccccggctccactccaccgctcctccgtccaaatcatca
agctctgatctccggccacacactcgagctctgctgtcccgcggctacgccactgaggca
ccttacaggcccagggtgacgctcatcacctacaactcagccagtacgcagggatcactg
gttggcgccatgcctgcctccgatgggaccatcctgggagaggagacccactttccctcc
ctggcctcagagggagcaggagccaccacaccctcggtagacttcccgttcagctctcag
actcaggtcaaagctcagggcagaccagctcctctccagcccacatctgaaccggctcag
ccccagaacgttcctataaataaaatctccactctggtcaccaccttgcagcccaaggag
gccacaaaatccacctgcacagcatctatgttgaatcacaaggagcttccaccctgcatc
gatccagccgttcccacctttggtgctgctccagtgaatcagacgtctctggaggacacg
tcccaggaggggatccttaagaagactagggaaccagctgagaaaaccgctgctacctac
aagtacttgtccagaactgtgtcgtggtccggctcggccagcctgccccgtggctaccgg
cggtccgagggctcgtcccgtctctcctcttcgatcacagcgagaccctttgggaccaag
cagtcgaggatgtcttcgcttccgagactgtgcactgtggacggcagcggtttgcagttg
aacagcgagacagaaaaatgtctttatccacccacgaaatcttctcttaaaagacagact
gcagccagtcacctgaggacttcactcagactgaagaaaaccagccagatgaagccgatt
ctctccactcagtcctccctcaagaccaacgggtttcaccatcagccctgcacccagacc
cagccactaccttattcaacccttcaggccgagcactacaacagctccactctgccgaca
actaccaaggtggatcacagtaacatgagagtgagccttacccttaaacccaaacgggta
ccagacttcggtttagagactcactgggactcgacaggagcgagagtaaagttcatccag
cccggcagtccagcggagctctgccagctgcgtgtggatgatgagattgtggcttttgat
ggagtggcggtggcacacatgaactacaaccagtggaaggatagaatggcgtccgccctg
cagaccggcaatttgagcatggacattagacgctatggcaacaaggattggagctccagt
gagggggatcatcccgaccagccgggcaggagcaggatgaccctcaatctgacggccgca
gcgcccggtctgataggttgtcccgatcaccatgccaaccgaactgcctctacagaaacc
gcagctttgaaactcaacgggcacaaaggcagcgttgaacaaggtgaagtcttggatgga
ggatctgctgaaggccacagcacggccaaaagcaaagacgttaatataatgatcaggaac
aatcagaaaaggagggcagagtttttcagacagagaggaggttccgaatctgcgatatct
gatctccaggtgccgtccctcagcccctcctcatccagctggtcgtgggaccgagaggag
gatcgacggcgacaggagaagtggcaggaagagcaggagcgcctcctacaggagcaatac
cagcgggaccaggagagactggaggcagagtggcgcagggcacaacaggatgcgactggg
gacttgtgcaggaagtcggtgcaaaccaccttccagatgaccaatggcggtgcgggccct
gccagaacgcagctccatgtgaatgccctgtcaaccagagctgcaggagaagagcagagg
cctgacggagacgagctgaacgagtcgggacgtaaacctcagagtgatgcacgcggacag
cagagggaagccatcgctgaacaagactgggctgtggaatcctgtggctttgctcagctg
tctactgcacacagggcgaagtctttgtcctccccggccttagctggctcccacaaacag
acgcgaggtgatcagaggaaaagaaagggacagtccctgtgtaagagtgagcaggacagg
cagcagattttggaggagatgaagaaaaggactcagcttctgagagacaacagctggata
cgtccgcgcagaagcagctttcccaaggaaccagtctacggcgtggatcctctgaagagg
tacgagtctctggacgacctggacgctttgcgtcaccccccagtttcatccgccacattc
ggtttccctcgtccacactcagctgcaggctcctgcgccccgagcaggaactgctcctcc
cgctacagcaccggagccattctatccaggaaatatgtatccatggacccagttcatcac
ggcagtgtgtgggctgccgccgatgtttcggaggaactgaacctggagtccaggttcgaa
cctgcaaatggaaaccccactgtgagctatgaccaagtccagtacactggctcctcctac
atgtga
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