Pleuronectes platessa (European plaice): 128443967
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Entry
128443967 CDS
T09923
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a isoform X1
KO
K05636
laminin, beta 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04510
Focal adhesion
pplt04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128443967 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128443967 (lamb1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
128443967
NCBI-ProteinID:
XP_053282199
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All DBs
Position
7:70801..94996
Genome browser
AA seq
1787 aa
AA seq
DB search
MTQFQLALLLESLLSVLQVCACAQEGGANVGGELDDVILPELGDVCTEGSCYPATGDLLI
GRARQLSSTSTCGLRRPEPFCIVSHLQEEKKCFTCDSTALYDELADQTHSHRVGNVVTTF
APNRLKTWWQSENGQENVTIQLDLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWNVY
RYFAYDCETSFSSVSRGPMQKVDDVMCDSRYSDIEPSTEGEVIFRVLDPVFRINDPYSAK
IQNMLKITNLRVKFTKLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPA
HADGQTREDMVHGHCRCNHNTKGLNCELCQDFYHDLPWGPAEGRNTNACKKCNCNQHSDS
CHFDMAVFVASGNVSGGVCDDCQHNTAGHNCEQCKPFYYQHPERDVRDPNICHPCSCDPV
GSLNGGSCDQMTDVRTGLIAGQCRCKVNVEGERCERCKQAHHGLSDSPDGCSACTCSPVG
TVPGGNPCDSETGSCFCKRLVIGRDCDQCVSEHWGLSNDMDGCRPCDCDLGGAINNQCDQ
ATGQCSCRDHMFGRRCDQVESGFYFIALDHYTFEAEDANLGPGVMVVPRPHPQDRSPTWT
GIGLVHVPEGAFLEFSVDNIPHSMEYDIIIRYEPQLPDQWEEVLMTVMRPGPITADSRCI
NTVPDEDNQMISLHPGSRYVVLPRPVCFESHLNYTVRLSLPLYSAVSDVQSPYTLIDSIV
LMPHCRNLEIFTASEGGDSSDSSGWDVFQRYRCLENSQSVVKTPMTDICRNFIFSISAML
HQGAKECQCDLQGSLSTVCVPSGGQCQCRPHVVGRNCDMCAPATFQFGPNGCRECACDPQ
GSQNPFCDQLSGQCVCAAGAYGRQCDRCLPGHWGFPSCRTCPCNGHADDCDPNTGSCISC
RDHSTGHSCDRCLDGFYGDPMLGSGDHCRPCMCPDGPSSRRQFAGSCYRSDDSQQAICVC
STGYRGARCDECSPGYYGNPGEVGGQCRPCQCNNNIDMSEPGSCDAQTGECLRCRFHSVG
VACQSCKLGYYGNALLQDCRKCVCDTLGSDSSSCASGDCHCDGSSGQCPCLLNVIGQHCD
RCAPDTWNMASGRGCQICDCESEHSYGTSCNEISGQCSCRPGFGGRTCSECRELFWGDPE
VKCHGCDCDPRGVSEHQCNKVSGHCVCVEGVAGPRCDTCARGFSGIFPDCLRCHQCFAEW
DNVIGQVTNQTHRLVNKVNALKASGVSGPYRKSIDNIERSAADIWVLLNQNPASQPLTEI
QHLLQQASDLMKALSQMLSHTEQTLVEAEERDSAAESKLDSVTSDAQKLERTVQELLDQV
EFIKNSDITGATASITKYFLLSEAAEARANSSTIDAGSSVETSAALRQLTEDKLNQTREE
FLRRHTEHAQKLDDLAGELQTLDLSEISHKTCGSPLVDQDLCTSCGGEGCDGVVVTANTA
WRKTQESEQEIISAIGEVEKLSKMVSEVKLKADEAKLSAQDVLMKTNRTKQKVDQSNDEL
RSLIRQIRDFLTQDAADLESIELVANEVLAMQMPTTPAQLQNLTEEIRQKVGELGHVETI
LQQSTDNIQRAENLLDQARRASEEAAEVKDSAEKMKKALEEARRAQSAASSAIQQAAADI
QNTNTLLATVQSETTEAELKLNNATNRLQRLEQGVTLLIHKAVNVTMSSEQTNQDAESIT
KIAEEVKKDLESDLKDKYATVGQLIDHKAGGVADAKKRAVSLQQEAKQLLLQASDKLQLL
KDLEKSYNENQQTLEVKAELLVELEAAVKELLQEISHKVTVYSTCLF
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagtttcagctcgcgctgcttctcgagtctcttctctcagtcctacaggtgtgc
gcctgtgctcaggagggcggggccaatgtgggcggagaactggatgatgtcatcctcccg
gagctcggtgacgtttgcactgaaggcagctgttacccagcaacaggagaccttctgatt
ggccgagctcggcaactgtcgtccacctctacctgtggtctgaggcgacctgaaccgttc
tgcatcgtcagccacctgcaggaagagaagaagtgtttcacctgtgactccacggcgctc
tatgacgagctggctgatcagacacacagccatcgtgtcgggaatgtcgtgactacgttt
gctccgaacagactgaagacgtggtggcagtctgaaaacggtcaggagaacgtcaccatt
cagctggatctggaggcagagttccacttcactcacctcatcatgaccttcaagacgttt
cgtcctgctgccatggtgattgagcgatcagcggacttcgggaagacgtggaacgtttat
cgttatttcgcgtacgactgcgaaacgtctttttcttccgtttcccggggtccaatgcag
aaggtggatgatgtcatgtgtgactcacgttactccgacattgagccatccactgaggga
gaggttattttcagagttctggatccggtgttcaggatcaacgacccctacagcgctaaa
atccagaacatgttaaagatcactaacctgcgggtgaagttcaccaagctgcacacactt
ggagacaatctactggactctcgtatggagatcaaagagaagtattactacgccatctac
gacatggtcgtccgaggaaactgcttctgctatggacacgcctctgagtgtgcccccgcc
cacgctgatggacagacccgggaagacatggttcatggtcactgcaggtgtaaccacaac
actaaaggtctgaactgtgaactgtgtcaggatttctaccacgatcttccctggggacca
gcagagggccgtaataccaacgcctgcaagaagtgtaactgtaaccagcactctgactca
tgccacttcgacatggccgtgttcgtggcttcgggaaatgtcagcgggggggtctgtgac
gactgtcagcacaacacagctggacacaactgtgagcagtgtaaaccgttctactaccaa
catccagagagagatgtgagggaccccaacatctgccatccctgtagctgtgaccctgtg
ggttctttgaatgggggatcatgtgaccagatgaccgatgtgagaaccggtctgatcgcc
ggtcagtgtcgctgtaaagtcaacgtggagggagagcgctgcgagcgctgcaaacaggcg
catcacggactgagtgactcaccggacgggtgttcagcatgtacctgcagccctgtagga
acagttccaggaggaaatccctgtgacagtgaaacaggaagttgtttctgtaaacgtctg
gtgattggccgagactgtgaccagtgtgtgtcggagcactggggcctcagtaatgatatg
gacggctgcagaccatgtgactgtgacctcggaggagccatcaacaaccagtgtgatcag
gccactggtcagtgcagctgcagagatcacatgtttgggcggcgctgcgatcaggtggag
tctggattttacttcatcgctctggatcactacaccttcgaggccgaagatgccaatctt
ggacccggggtgatggtggtgccgaggccccaccctcaggaccgcagtcccacctggacg
ggcatcggcctggtccatgtccctgagggggccttcctggagttctcagtggacaacatc
cctcactccatggagtatgacatcatcatccgctatgaacctcagctgcccgaccaatgg
gaggaagttctgatgacagtgatgaggcctgggccaatcacagcagacagccgctgtatt
aatactgtacctgatgaggacaaccagatgatttcacttcatcctggctcacgctatgtg
gttctccccagaccagtttgttttgaatctcatctgaactacaccgtgcgcctcagtctg
cctctgtactcagccgtcagtgacgtccagtctccgtacacactcatcgactcgatcgtg
ttgatgccgcactgtagaaacctggagatcttcacagcctccgagggaggagactccagt
gacagcagcggctgggatgttttccagcgttatcgttgtttagagaatagccagagcgtt
gtgaagacaccaatgacagatatctgcagaaacttcatcttcagcatctccgccatgttg
caccagggagctaaagaatgccagtgtgaccttcagggctccctcagcaccgtgtgtgtt
cccagtgggggtcaatgtcagtgtcgcccccatgtggtcggaagaaactgtgacatgtgt
gctccggccacattccagttcggacccaacggctgcagagaatgtgcatgtgaccctcaa
ggttcacagaatccattttgtgatcagctcagtggacagtgtgtctgtgctgctggtgcg
tatggtcgacagtgtgatcgctgcctgccgggtcactgggggtttccttcctgtcggacc
tgcccatgcaatggccacgctgacgactgcgaccccaacactggatcctgcatcagctgc
agggaccacagcactggacacagctgtgacaggtgtctagacggcttctatggtgacccc
atgctggggtcaggtgaccactgtcggccctgcatgtgtcccgatggccccagcagccgg
cggcagtttgcaggaagctgttaccgaagtgacgactcccagcaggccatctgtgtctgc
agcactggatacagaggcgctcgctgcgatgagtgctcccctggttactatggaaaccct
ggtgaggtgggggggcagtgtcgaccgtgtcagtgcaacaacaacatcgacatgtcggaa
ccggggtcatgtgacgctcagaccggcgagtgtctgcgctgccggttccacagcgtgggc
gtcgcctgccagagctgcaaactgggttactacggcaacgcgctgctgcaggactgcaga
aagtgtgtttgtgacacactcggcagcgacagctccagctgtgcgtccggtgactgtcac
tgtgacggcagcagcggccagtgtccctgtctcttgaacgtgattggtcaacactgcgac
cgctgtgccccggacacctggaacatggcgagcggccgcggctgtcagatctgcgactgt
gaatccgaacactcttacgggacgtcctgcaacgagatcagtggtcagtgttcctgtcgc
cccggcttcggaggaagaacctgcagcgagtgtcgagagctgttctggggagatccagag
gtcaaatgtcacggctgtgactgtgaccctcgtggcgtctctgaacatcagtgtaacaag
gtcagtggtcactgcgtctgtgtggagggcgtggccggaccacgttgtgacacgtgcgca
cgtggattctcaggaattttcccagactgcctccgctgccaccaatgctttgctgaatgg
gacaatgtcatcggtcaggtgaccaatcagacgcaccgcctcgttaacaaggtcaacgcc
ctgaaagcaagtggagtgagcggaccgtacaggaagtccatcgacaacatcgagaggagc
gccgcggacatctgggtcctcctgaaccagaacccagcttcacaaccgctcactgagatc
cagcacctgctccaacaggccagtgacctgatgaaggccctgagccagatgttgagccac
acagaacagactctggtcgaggcagaggaacgggactcggctgcagaatctaaactggac
tctgtgacatcagatgctcaaaaactggagcgcaccgttcaggagctgctggatcaagtg
gagttcatcaaaaactctgacatcacaggggcgacagccagcatcacaaagtacttcctg
ctttctgaggcggctgaagctcgagccaactcctccactatcgatgctggaagctctgtg
gaaacctctgccgctctacggcagctcacagaggacaaactgaatcagaccagggaggag
ttcctgaggaggcacacggagcacgctcagaaactggatgacctggctggagagctgcag
actctggacctatcagagatcagccataagacatgtggcagtccattagtggatcaggat
ttgtgcaccagctgtggaggcgagggatgtgacggcgtggttgtgacggccaacactgcc
tggaggaagactcaagagtcagaacaggaaattatcagtgctatcggggaagtggaaaaa
ctgtctaagatggtgtcagaagtcaagctgaaggcagatgaagcgaaactgagcgctcag
gacgtcctgatgaagaccaacagaaccaaacagaaagtggaccagagtaacgatgaactg
agaagtctcatcagacagatcagggactttttaacacaggatgccgcagacctggagagc
atcgagctggtggctaacgaggttctagcgatgcagatgccgactacgccggcgcagctg
caaaacctcacagaagagatccgacagaaggtgggagaactgggacatgtggagaccata
ctgcagcagagtactgacaacatccagagagctgagaacctgctggaccaggcccgtcgc
gccagcgaggaggcagctgaggtgaaggactctgcagagaagatgaagaaagctctggaa
gaagctcggagagctcagagcgcagccagcagcgccatccagcaggcggccgccgacatc
cagaacaccaacaccctgctggccacggtgcagtcagagacaacagaagcagaactgaag
ctgaacaacgccaccaacaggctgcagaggctggagcagggcgtcacattactaatacac
aaagctgtgaacgtcactatgagctctgaacagaccaatcaggatgcagaaagcatcaca
aagatagcagaggaggtgaagaaggacctggagtccgacctgaaggataagtacgccaca
gtggggcagctgatcgatcacaaggccgggggtgtggctgatgccaagaagagggcggtg
tcactgcaacaggaagccaaacagttgttgttgcaggccagcgacaagctgcagctgctg
aaagatctggagaagtcgtacaacgaaaaccaacagactctggaggtgaaggctgagctg
ctggtggaactggaggctgctgttaaagagctgcttcaagagatcagccacaaggtcacc
gtctacagtacctgtctgttctag
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integrated database retrieval system
