Pleuronectes platessa (European plaice): 128444031
Help
Entry
128444031 CDS
T09923
Symbol
spg11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128444031 (spg11)
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128444031 (spg11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
DUF2716
TetR_C_31
Motif
Other DBs
NCBI-GeneID:
128444031
NCBI-ProteinID:
XP_053282296
LinkDB
All DBs
Position
7:847721..865282
Genome browser
AA seq
2428 aa
AA seq
DB search
MLEAPRPETSPIAVAVIPETREEVADIRGAQLAPGGSLIGCLLPGAPGLPLPGAPGRLLL
WDPADRGAPPAAVDASCTEFSWEEQSVHSRGVSRLLAVGPQCDLKLLEVEVEPSAALALL
CVSGCAADLLLQAVRQQDHSVVQLQSLRLLSFAAGRSCVLLNDDWLLQLQWLQAEAEPQI
LTCCSIQPPEGDRHSAVSHCVCRDTLFTLSAAGIISVFRISDGLLLASVDIPLYLSSDLE
EDEVVSSSPASSSSSSSSFCLLQVSADLSTAVAVTQSHAAVGVDLDHYFRMCPDHLICAV
PPARPDLGPMRDQDGLSSCRLAALGSTFSTDRSWEAHLASMYSRAQQAPPPSTSSTSSQP
AGMPWSSSLPHLESHQAPSSAHSRVPCGGATVSFSVPESSAPCLLSVSGFSALLTFVCPG
NRRTTVASWDFASGSVSLHQEEEEEAAPLLRCGERQHRLLLKKAGVFQVLFSVSQQDLLS
SLMLFGSAATVDAVCHLNSWGRCSIPIHALQAGLKNRQLDTVDFYLKSKENLLNPSADQL
TASTPSLTHCVQELCPALDLLCSAVRDSNSEAQSRQFSEQLLNFTLNFVNTQIRSVLSSS
HYEDAGVRSCVDVLDRYVTELRSYMKRYPWPAGGDVSCTDSAAPAQEEALEDEWEQLPTE
ELVQRSILTNQIPRAQAILRRRSRPEQHLWALRREGLRQVFSRLQQRDVETATALLVNMG
FSVKKQLHSFCLYTDDKHLREFVVEELSRRSYLAEEEMQSVMFIRQMEKLGSVFPSRCPA
DSTGLRVVQMVPREPGGGAEEVLEELVGQRRSEEEAGLWQNVRLDWVRNWDQSCQTGVLL
SRLQHTELSSCDPAVLWRYLTALHDQHRVLDWIQNQETAGASLWPELVPELVNNNTLCST
YMREQILDLLARRGRFIPEELEDLEKLLWRLAQGGGAMASSPPVPQYRSALGLDLHGLVI
TFCLDHGLKYLLYTYLEHYRLTPRNCPVLTNQSLSESQPWFEMMVKIQEITRDLSDPRLL
FQACLTSAQVLLPGSQASLSSLLLEGHSLLALAAITFAPGGIDQVVVQGSEGSGRTVDPQ
LLKMALAPHSKLKAALFPPGPRGHSLSSDISVYHLLQSLHPLDPSRLFGWQAANTLNSTE
TSELPHFSSPHLVNRFALVENLDFLYYLRHGRPSFAFATFLVQQLSSCSDSTLLWQQARQ
QVYRFALQCFNVPSVTSAAVCFCELLGVCSLRLRVDLRAMNSILQHWSQHNTHTAPTQRL
HTLGVKLAEAEPGAAEQLIGYLEAAVADSVEQRGVARSSYEASQEWAVPVQFCQLHSLEL
SSVYPAHCADDGQFVHFLLFVELHSFPPQQVRSLVARFGPALQAHLSLAFQELQLHRQRR
SSGSEEQPQCGSTEKASGGPEPLRELFQVLLQSQEEASPCRFLLHEALVQRCPTLAVLAA
CQQGAELLPCLCAWVLTSVNDVTLSEATAHLLEAPQHHEWTLHDLSIIWRTLLGRGHVRP
LLRGFALFQRDCPLVLVLRMFELCCDYRNFSEAKVKLLDFQRTLITLRNRGPVPPGGLPL
QWVESQASVLLLTMLQRCSSQYDLHRLLQLLADVDKLLKSNGPDFRKLSRLSQLLQGSDV
SLSPRLLQCSSPSVQQEEFQAAVDALQARGRYTQARKVALLADLPVHHLLLSQLLQEMNS
QKSKTTWRRLETRVSFWRSCQEQLKSDSTDPGSASCFFLSQAEASDSSAAADVQTELLDV
QERCLLLGLAAHWLSQLSPTPIDQLESMEKKLWISRVRQHVLAVAMEQESVFNLPPPAVA
PEMNKYEVLMKEFSFSNISALNTETCLRLDGLPGRSEEQEEQEEEEQEEQQEQQEVQEQQ
EEEQEEQDINSEERRVLASLIGQLLDDGSIHEASRVCRYFCLHHPDVWVVLRCRGLASGE
LSPAPKEEESEAPPRRSITPSSSFGSLSLAMTPPPEDEVAAQLQRLVDQCCHGNNYCKQV
LSLYQLSKELQSSFSHICLQEPRSVLELLLQSDQPERFRKAQAFIRAQGLSTDTVAELVS
SAVAQALLASAHDLHPEKQVFRPSEGRDSLLQLIKLCDDPNLVGIKLLENVNVVQLRDLS
CIVDLLIAAHDCFSLTCNMEGIVRVLQAARHLSHTYLAPGEHYGLLVRLLTGIGRYDEMT
YVFDLLHQNHRFEMLLRKKVDMDRGQSSSLKTALLDYIRRCLPADSEKHNMVALCFSMRR
EIGENHEMAARTQLKIIESQEWVVTPDLKSSLVKVLGLLKDAAESFSKDSCVRQATRCVL
TAKLVALQLHFLNQGSDVRVINLRPAVLLNTLVQLPRCYQVFVVSEAYGVSPDWAEVLFQ
KVILKGDFVYLEELKRHRPLTSSLFEDIFKKLEGAPSSVTVHVKRLLTHCEDVYSRYRLA
YQQKLDHVTKTMLQDAKTSNYLNDRLAS
NT seq
7287 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggctccgcggccggagaccagccccatcgcggtggctgtgatccccgaaacc
cgcgaggaggtggcggacatccgcggagcgcagctcgctccgggaggctccttgatcggc
tgcctgctgccgggggccccgggcctcccgctgccgggggccccgggccgactgctgctg
tgggaccctgcggacagaggcgctcctccggcggctgtggacgcttcctgcaccgagttc
tcctgggaggagcagagcgtccacagtcggggcgtcagcagactcctggctgtgggacct
cagtgtgacctgaagctgctggaggtggaggtcgaaccatcagccgccctcgctctgctc
tgcgtctctggatgtgctgcggacctcctgctgcaggctgtgagacagcaggaccacagt
gtggtccagctgcagtcgctgcgtctgttgtcgttcgccgccggccgcagctgcgtgttg
ctgaatgatgattggctgctgcagctgcagtggctgcaggcggaggcggagccacagata
ttaacctgctgcagcatccagccgcctgaaggcgacagacactcagctgtcagtcactgt
gtctgtagagacacactgttcaccctcagcgccgctggaatcatctctgtgttcaggatc
tctgacggcctcctgctggccagcgttgatatccctctgtacctgagctccgacctggag
gaggacgaggttgtctcctcctctccagcctcctcctcctcctcctcctcctccttctgc
ctcctccaggtgtcggctgacctcagcacagccgtcgccgtcactcagtctcacgctgcc
gtcggcgtggacctcgaccactacttcaggatgtgtccagaccacctgatctgtgccgtt
ccgccggctcgccccgacctcgggccaatgagagaccaggacggtctgtcgagctgccgc
ctcgccgccctcggatcgaccttcagtactgaccgttcctgggaagctcatctggcctcc
atgtacagcagagctcagcaggctccacctccctccacctcctccacctcctcccagcct
gccgggatgccctggtcctcctccctccctcacctggagtcccaccaggctccgtcctcg
gcccacagccgagtcccttgcggcggagcaaccgtcagcttctccgtccctgagtcctcc
gccccgtgtctgctctctgtctccgggttctctgccctgctgacctttgtctgccccgga
aacaggcggaccacagtagcctcctgggattttgcctccgggagtgtgagcctccaccag
gaggaggaggaggaggcggctcctctcctgcgctgtggagagagacagcacagactcctg
ctgaagaaggccggcgtgttccaggtcttgttctctgtttcccagcaggacctgctcagc
agcttgatgctgtttggaagtgcagcaacagtagatgcagtgtgtcacctgaacagctgg
gggcgctgctccatccccatccacgccctgcaggccggactgaagaaccgtcagctggac
acggtggacttctacctgaagagcaaagagaaccttctgaacccgtcagcagatcagctg
acggcctccacgccgagcctgacccactgtgtccaggagttgtgtcctgcgttggacctg
ctgtgttcggccgtcagagactcgaacagtgaagctcagagtcgacagttttcagaacag
ttgctcaacttcaccttgaactttgtcaacacacagatccgctctgtgctgtccagctcc
cactacgaggacgcaggtgtgcggagctgcgtggacgtgctggaccgctacgtcactgag
ctgaggagctacatgaagagatatccctggccagcagggggcgacgtctcctgcaccgac
tctgctgctccagcccaggaggaggcgctggaggacgaatgggagcagctcccgacagag
gaactggtccagcgatccatcctgaccaatcagatccccagagctcaggccatcctgagg
aggcggagccgcccggagcagcacctgtgggctctgaggagggaggggctgcggcaggtc
ttctcccgcctgcagcagcgagacgtggagacggccaccgccctcctcgtcaacatgggt
ttcagtgtgaagaagcagctccacagtttctgtctctacacggacgacaaacacctgagg
gagtttgtggtggaggagctgtcaaggcggagttatttagcagaggaggagatgcagagt
gtgatgttcatcaggcagatggagaagctgggatcagtgtttccatctcgctgccctgca
gactccacagggctcagggtcgttcagatggttcccagggagccgggaggcggggccgag
gaggtcctggaggagctggtgggacagaggcggtctgaggaggaagcagggctctggcag
aacgtccgattggactgggtgaggaactgggaccagagctgtcagaccggcgtcctcctg
tcccgactgcagcacacagagttgagctcctgtgaccccgccgtgctgtggcgttacctc
accgccctccacgaccagcaccgggtgttggactggatccagaaccaagagaccgctggc
gcctccctgtggccagagttggttccagagctggtgaacaacaacacactgtgcagcacg
tacatgagggagcagatcctggacctgctggccagacgaggccgcttcatcccggaggag
ctggaggatctggagaagctgctgtggcggctggctcagggcgggggggcgatggcttcg
tctcctcccgtccctcagtaccgctcggcgctcggcctcgacctccacggcctcgtcatc
accttctgtctggaccacggcctgaagtacctgctctacacctacctggagcactacagg
ttgactcccaggaactgccccgtcctgaccaatcagagcctgtctgagagtcagccctgg
ttcgagatgatggtgaagatccaggagatcaccagggatctgtcagaccctcgcctgctc
ttccaggcctgtttgaccagcgctcaggttctgctgccgggcagtcaggcgtctctcagc
agcctcctgctggagggacacagtctgctggcgctggctgccatcaccttcgcccccgga
ggaatcgaccaggtggtggtccaggggtcagaaggctcagggaggacagtcgaccctcag
ctcctgaagatggcgctggccccccactccaagctgaaggccgccctgttcccccccggg
ccccggggacacagcctgtcctcggacatctctgtttaccatctgctgcagtcgctccat
cctctggacccgtccaggctgtttggctggcaggcggccaacaccctcaactccaccgag
acgtctgagctgcctcacttctccagccctcacctggtcaacaggttcgctctggtggag
aacctggacttcctgtactacctccgtcacggccggccgtccttcgccttcgccacgttc
ctcgtccagcagctgagcagctgcagcgactccacgctactctggcagcaggcccggcag
caggtgtaccggtttgctctgcagtgtttcaacgtcccgtcggtgacgtctgcagccgtt
tgtttctgtgagctgctcggagtctgcagcctgcgcctgagagtcgacctcagagccatg
aactccatcctgcagcactggagccaacacaacacacacactgcccccacacagaggctg
cacactctgggagtgaagttggcagaggcggagcctggcgcagcggagcagctgattggt
tacctggaggctgcagtggcggacagcgtggagcagaggggcgtggccaggtcgtcatac
gaggcgtctcaggagtgggcggtgccagttcagttctgtcagcttcacagtctggagctc
agctctgtttaccccgcccactgcgccgatgacggacagtttgtccacttcctgttgttt
gttgagctgcacagtttcccgccccagcaggtgaggtcactggtggctcggtttggcccc
gccctccaggctcacctgagcctggcgttccaggagctgcagctgcaccgtcagaggagg
agcagtggatctgaggagcagccgcagtgtgggagcacagagaaggcctctgggggtccg
gagcccctcagggagctgttccaggtcctgctgcagagccaggaggaggcgtcgccctgc
aggttcctgctgcacgaggcgctggtgcaacgctgccccacactggctgtgctggctgcc
tgtcaacagggggcggagctgctgccctgcctgtgtgcgtgggtgttgacctctgtgaat
gatgtcacactgagtgaagccaccgcccacctgctcgaagctccacagcaccacgagtgg
accctgcacgacctgtcaatcatctggaggacgctgctggggcggggccacgtcaggccc
ctcctacgaggcttcgctctgttccagagggactgccccctggtgctggtgctcaggatg
ttcgagctgtgttgtgactacaggaacttctccgaggccaaagtgaagctgctggatttc
cagaggacgctgatcactctgagaaaccgtgggccggtgccccctggtggactccccctg
cagtgggtggagagccaggcctcggtgctgctcctcacgatgctgcagcgctgctcctcc
cagtacgacctccaccgcctgctgcagctcctggccgacgtggacaagctcctcaagtcc
aacggtccagacttcaggaagctgtcgcggctcagtcagttgctgcagggctcagacgtc
agcttgtctcccaggctgcttcagtgcagttcaccctctgtccagcaggaggagttccag
gctgctgtggacgctctgcaggccagggggcgctacactcaggccaggaaggtggcgctg
ctggccgacctgcccgtccaccacctgctgctcagccagctccttcaggaaatgaactcc
cagaagtccaagacaacgtggaggaggttggagacccgggtcagtttctggaggagttgt
caggagcagctgaagagcgacagcactgatccaggatcagcctcctgtttcttcttgtcg
caggctgaagcctcagattcctcagcagctgcagacgttcagacggagctgctggacgtc
caggagcgctgcctcctgctgggcctcgctgctcactggctctcccagctcagcccgact
cccatcgaccagctggagagcatggagaagaagctttggatcagccgggtgcggcaacac
gtcctcgccgtggccatggagcaggagagcgtcttcaacctgccaccgcccgccgtcgca
ccggaaatgaacaagtatgaagttctcatgaaggagttctccttctccaacatatcagct
ctgaacacggagacctgcctccgtctggacggactgccgggtcgctccgaggagcaggag
gagcaggaggaggaggagcaggaggagcagcaggagcagcaggaggtgcaggagcagcag
gaggaggagcaggaggagcaggacatcaactccgaggagaggagagttctggcttcactg
attggtcagctattagatgacggcagtatccatgaagccagccgagtctgccgctacttc
tgtctgcaccacccagacgtgtgggtggtgctgcgctgccgagggctggcgtccggagaa
ctgagccccgccccaaaggaggaggagtcagaggcgccgccgaggaggagcatcaccccc
tcgtcatcgttcggcagcctgtcgctcgccatgactccgccccctgaagacgaggtcgcc
gcccagctgcagcgactggtggatcagtgctgccatggcaacaactactgcaaacaggtc
ctgagcctctaccagctctccaaggagctgcagagctcgttcagtcacatctgcctccag
gagccgcgctcggtgctggagctgctgctgcagtcggatcagcccgagcgcttcaggaag
gctcaggccttcatccgggcccagggcctctccacagacacggtggccgagctggtctcc
tccgccgtggcccaggcgctgctggcctccgcccacgacctccacccggagaagcaggta
ttccggccgtcggaggggcgggactcgctgcttcagctgatcaaactatgtgatgacccg
aatctggtgggaatcaaactgctggaaaacgtcaacgtggttcaactgagagacctgagc
tgcatcgtggatctgctgatcgctgctcacgactgtttcagtctcacctgtaacatggag
ggaatcgtccgggtgctgcaggccgcccgtcacctcagccacacctacctggccccgggg
gagcactacggcctgctggtgcgtctgctgacaggcatcggcagatatgatgagatgacg
tacgtcttcgacctgctgcatcagaaccatcgcttcgagatgctgctgaggaagaaggtg
gacatggaccgaggacagagctccagtctgaagacggccctgctggactacatcaggcgc
tgcctccctgcagacagcgagaagcacaacatggtggcgctgtgcttcagcatgaggagg
gagatcggagagaaccacgagatggctgccaggacgcagctgaagatcatcgagtctcag
gagtgggtcgtcacgccggatctgaagagctcattggtcaaagtgttgggtctgttgaag
gacgcagctgagagcttctccaaggactcgtgtgtgcgtcaggcgactcgctgtgtcctc
acagctaagctagtcgctcttcagctccacttcctgaaccagggctcagacgtacgtgtc
atcaacctgcgacctgcggtgctgctgaacacgctggtccagctgccgcgatgctaccag
gtgtttgtggtgtcggaggcgtacggcgtcagtcccgactgggccgaggttctgttccag
aaggtgattctgaaaggagacttcgtttacctggaggagctgaaacgccaccgcccgctg
acctccagcctgttcgaggacattttcaagaaactggagggcgctcccagcagcgtcact
gtgcacgtgaagcgcctgctgacgcactgcgaggacgtgtacagccgctacagactggcc
taccagcagaaactggaccacgtcaccaaaaccatgctgcaggacgcaaagacgtccaac
tacctgaacgacagactggccagctga
DBGET
integrated database retrieval system
