Pleuronectes platessa (European plaice): 128444044
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Entry
128444044 CDS
T09923
Symbol
amfra
Name
(RefSeq) LOW QUALITY PROTEIN: autocrine motility factor receptor a
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04137
Mitophagy - animal
pplt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128444044 (amfra)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128444044 (amfra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128444044 (amfra)
Enzymes [BR:
pplt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
128444044 (amfra)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128444044 (amfra)
Multi subunit type E3
ERAD complex
128444044 (amfra)
LMBR1L-GP78-UBAC2 complex
128444044 (amfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-rbx1
zf-RING_UBOX
zf-RING_11
zf-RING_16
zf-RING_5
zf-ANAPC11
Prok-RING_4
zf-C3HC4_4
zf_RING_Vps8
DUF7300
FANCL_C
Motif
Other DBs
NCBI-GeneID:
128444044
NCBI-ProteinID:
XP_053282313
LinkDB
All DBs
Position
7:1613892..1618741
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AA seq
558 aa
AA seq
DB search
MPVLFLERVPWPSLQTYTALSAALLTGTVLSVCSSGSFPQSSPEEESRPPGLSSGVNRFL
RAGGQGLGSGFGDMAAEVLMSLWTDSVLVWVVVNSSCCVLLLVGRXQWLVFGSLRVSEEQ
QLKDKFWTFIFYKLVFVFGVLSVQTVDEVLLWWFWFSALLFLQLLVQLCRDRLEYLSLSP
AVPLSSRVLLLLVLLMLGCSGLASLCSRLARGRGGHVAGFMAAECMMETVRTAHVMFRSS
IHLWDVNQEKKSSSVYYTDLLVELLLLGLDLLHHIHMLIFSNIWLSLASLVIFMQLCSIA
QELQRRIHRHLTFLLLLHNMETRFPVASSDELVDGGEDCVICWDVMRSARTLPCGHVFHS
SCLRSWLEQDTSCPTCRMSLDIGGGGGVPVETREAVPDNMAAARPHLNQINHFFHFDGSR
VARWFSVELMATTNFLLGIAPTTPSQINAMGQPIQEMFPHVPDLEVTGSLEVNTDHILEG
RVQNAVLPLVVEHPLIHVTPPPEDDKRESLEDEDEDEEEEEEDEDEAAETQIPEEDVKDQ
EKKELRFCPSAEERQKLL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcctgttcctggagcgggtcccgtggcccagtctgcagacctacacggcgctg
agtgctgccttgctcaccggcaccgtcctctccgtctgctcctccggctccttccctcag
tccagcccggaggaggagagccgccccccgggactcagctccggggtcaaccgcttcctc
agggccgggggacaggggctgggctccggctttggagacatggctgcagaggtgctgatg
tccctgtggacagacagcgtcctggtctgggtggtggtgaactcgtcctgctgtgtcctg
ctgctcgttggcaganctcagtggcttgtcttcggttccctgcgtgtcagtgaggaacag
caactgaaggacaagttctggaccttcatcttctacaagctcgtcttcgtgttcggcgtc
ctgagcgtccagacggtggacgaggtgctgctgtggtggttctggttctcggccctgctc
ttcctccagctcctggtgcagctctgcagggaccgacttgaatatctgtccctgtctcca
gccgtccccctgtcctcccgggtgctgctgctgctcgtgctgctcatgctcggctgctcg
ggtctggcctcgctctgcagccggctggctcgaggtcgggggggacacgtcgctggcttc
atggctgcggagtgcatgatggagacggtcaggacggcacacgtcatgtttcgctcctca
atccacctgtgggacgtgaaccaggagaagaagtcctcctccgtgtactacaccgacctg
ctggtggagctgctcctactgggcctggacctgctgcatcacatccacatgctgatcttc
agtaacatctggttgtctctggcgagtctggtcatcttcatgcagctctgctccatcgct
caggagcttcagaggagaatccaccgccacctcaccttcctgctgctgctgcacaacatg
gagaccaggtttcctgtggcgtcttcagatgaactggtggacggtggtgaggactgtgtg
atctgctgggacgtgatgcgttcagctcggacgctgccctgcggtcacgtcttccacagc
tcatgtctccgctcgtggctggagcaggacacatcctgtccaacctgtcggatgtccctg
gacatcggtggaggaggaggagttcctgtggagaccagagaggccgtcccagacaacatg
gctgctgctcggccgcacctcaaccagatcaaccacttctttcactttgacgggtctcgt
gtcgcccgctggttctctgtggagctcatggccacaaccaacttcctgctgggcatcgca
ccgacaaccccgtctcagatcaacgccatgggtcagcctatccaggagatgttccctcat
gttcccgacctggaggtcactggatccctggaggtcaacacagaccacatcctggaggga
cgagtccagaacgccgtcctgccgctggttgtggagcacccgctcatccacgtgactcct
ccccctgaggacgacaagcgtgagagcctggaggacgaggacgaggacgaggaagaggaa
gaggaggatgaggatgaggcggcggagacacagattccagaggaggacgtgaaggatcag
gagaagaaggagttacggttttgtccatcagctgaggagcgacagaagctgctgtag
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