Pleuronectes platessa (European plaice): 128444099
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Entry
128444099 CDS
T09923
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
128444099 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128444099 (rag1)
Enzymes [BR:
pplt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128444099 (rag1)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128444099 (rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1_ZnC2
RAG1_DNA-bd
RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_10
zf-RING_UBOX
zf-C3HC4_4
TRAF3_RING
zf-C3HC4_3
zf-RAG1
zf-RING_2
U-box
zf-RING_5
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
128444099
NCBI-ProteinID:
XP_053282381
LinkDB
All DBs
Position
7:complement(9506226..9510364)
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AA seq
1068 aa
AA seq
DB search
MEEKMETDGPRSSMPAELQHPQLKFSQWKFKLFRMKSMEKAPMPSEIQPEKEVLSEISPP
AAPEIELDNGVGPGSLMKLCLGGKSQENVEGPGRRVDKKLEEMETHMNHLRGLCRLCGIA
LRKVKGPAHEVHDDLEDASKGALRQMGCKFTSWPEVILKVFKVDVTEDTESVHPLSFCHR
CWTAAIRGGGFCCFSRTRVPEWNPHSSSCHLCSPKKCSFQRTGRKRRKTIPRVQSLTKRS
RWEPIDHIAVGERKVLKPFGERHPRPVLRGWRKSSIQRELWVENISHCQKHHLSTKLISE
KLPVDFLYSFTCMVCDHLLFDPVQSPCGHLFCRSCIAKYNHALGPQCPACNLPCAPYELT
PPAKAFLSALHSLPLLCPRGGCGERVRLDSFNAHSLDHELNKNNANKQSPEVDKFLLANK
GGRPRQHLLSLTRRAQKHRLRDLKNQVRVFTDKEEGGDLKSVCQTLFLLTLRSINEHRQA
DELEAMLQGRGLGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRAAEK
ELLPGFHEFEWQPALSNVSTSCHVGIINGTSGWTSSVDDSPIETITRRFRYDVSLVSALK
DLEEDIMEGLREAGMEDSACTSGFSVMIKECCDGMGDVSEKHGGGPAVPEKVVRFSFTVM
SVSVLADDEDREVTIFTEPKPNSELSCKPLCLMFVDESDHETLTAVLRPIVAERNAMKES
RLILSIGGLPRFFRFHFRGTGYDEKMVRELEGLEASGSTYICTLCDSSRAEASQNMVLHS
ITRCHEENLDRYEIWRTNPFSESADELRDRVKGVSAKPFLETQPTMDALHCDIGNATEFY
KIFQDEIGEVYDKVKPSREERRSWRAALDKQLRKKMKLKPVMRMNGNYARKLMSMEAVEV
VCDLVPSEERREPLRELMRLYLQMKPVWRATCPAKECPDQLCRYSFNSQRFADLLSSTFK
YRYNGKITNYLHKTLAHVPEIIERDGSIGAWASEGNESGNKLFRRFRKMNARQSKTFELE
DVLKHHWLYTSKYLQKFMEAHKNSAKALQGCINPVETQDDENLRVNDF
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaagatggagacggatggccccagatcctccatgccggctgagcttcaacat
ccccagctcaagttctctcagtggaagtttaagctgtttaggatgaagtccatggagaag
gcccctatgcccagtgagatacagccggagaaagaagtcttgtcagagatctcacctcca
gcagctccagaaatagagttagataatggtgtgggtccagggagtcttatgaaattgtgc
cttgggggaaaaagccaggaaaatgtggagggcccaggtcggagggtagataagaagctg
gaggaaatggaaacccacatgaaccacctcaggggtctctgccgtctctgtggaattgcc
ttgaggaaagttaaaggtccagcgcatgaagttcatgatgatctggaggatgcgagtaaa
ggtgccctgcggcaaatgggctgcaagttcacaagctggccagaggtcatcctcaaagtc
ttcaaagtggacgtgacggaggacacggagtccgtccaccctctgtccttctgccatcgc
tgctggacggctgccatcagaggagggggcttctgctgcttctccagaacaagagtcccc
gagtggaatccccactcctcctcctgccacctttgctcacccaagaaatgctcattccag
cggactgggaggaagaggaggaagactattcccagagtccagagcctcacaaaaaggagc
aggtgggagcccatcgaccacatcgctgtcggagagcggaaggttctgaaaccattcgga
gagcgtcatccccgccccgtgctgaggggctggaggaaatccagcatccagagagagctg
tgggtggagaatatctcccactgccagaaacaccacctgagtaccaagctgatctctgag
aagctccctgtggacttcctgtattctttcacctgcatggtgtgtgaccacctgctcttt
gatccggttcaatccccctgtggacacctgttctgccgcagctgtattgcaaaatacaac
cacgctctgggacctcagtgcccggcctgcaacttgccctgtgccccttatgagctcacc
ccgcccgccaaagccttcttatcagctctgcattctctgcctctgctctgccccaggggc
ggctgtggcgagcgcgttaggctcgactcgttcaacgctcactctctggaccatgagcta
aataagaacaacgcaaacaagcagtcaccagaagttgataagttcctgcttgccaataaa
gggggacggccccgtcagcacctgctgtcgctaacccggcgcgcccagaagcatcggctg
agggacctgaagaaccaggtgagggtgttcacagacaaagaggaaggtggcgacctgaag
tccgtgtgtcagaccctgttcctgctcacgctgagatccataaacgagcaccggcaggca
gatgagctggaggccatgttgcaaggcagaggtttggggttgcatcctgctgtgtgcttg
gccattcgggtcaacactttcctgagctgcagccagtatcacaagatgtaccggactgtc
aaagcgaccagtggccgccagatatttcagccgctgcacaccctccgcgctgcagagaag
gagcttctccctggctttcacgagtttgaatggcagccggctctttcaaacgtgtccacc
tcttgccatgttggtattattaacgggacctctggatggacatcctcagtggacgactcc
ccgattgagaccatcactcggcggtttcgctatgatgtgtcactggtgtcagcattaaag
gacctggaggaggacatcatggaggggctgagagaggctgggatggaagacagcgcttgc
acctcaggttttagtgtcatgatcaaggaatgctgtgacggaatgggcgatgtcagcgag
aagcatggcggaggaccggctgttcccgagaaggttgtacgtttctctttcactgttatg
tctgtctctgtcctggccgacgatgaagacagggaggtcaccatcttcaccgagccaaag
ccaaactcagagctgtcctgtaagcccctttgcctgatgtttgtggatgagtccgaccac
gagacactcacagctgtcctgaggcctatcgtcgccgagcgtaatgcaatgaaagagagc
aggctcatcctatccatcggtggcctgcctcgctttttccgcttccacttccgaggcacg
ggatacgatgagaagatggtgcgagagctggagggcctggaggcctcgggctccacgtac
atctgcactttgtgtgactcaagccgagccgaggcttctcaaaacatggtgctgcattcc
atcacccgctgtcacgaggagaacctggaccgttacgaaatatggagaacgaaccctttc
tctgagtctgcagacgagctgcgggacagagtcaaaggcgtctcggccaagcccttcttg
gagacccagcccacaatggatgcgttacactgtgacattggcaatgccactgagttctac
aaaatcttccaggacgagatcggggaggtgtacgacaaggtcaagcccagccgggaggag
cggcgcagctggagggcagccctggataaacagctgaggaagaagatgaagctcaaacca
gtaatgaggatgaatgggaactatgcccgaaagctaatgagcatggaggctgtggaggtg
gtgtgtgatctggtgccctcagaggagaggcgggagcccctgagggagctgatgaggctc
tacctccagatgaagcctgtgtggcgcgccacctgtccagccaaggaatgccccgaccag
ctgtgccgctacagcttcaactcccagcgctttgccgacctcctgtcctctaccttcaaa
tacaggtacaacggcaagataaccaactacctccacaagaccctggcccacgtgcctgag
atcatagagagagacggatccatcggagcgtgggccagcgaggggaacgagtcgggaaac
aaactgttcaggcgtttccggaagatgaacgcacgtcagtcgaagacctttgaactggag
gacgtgctgaaacatcactggctctacacctccaagtacctgcagaagttcatggaggcg
cacaaaaactcagccaaagctctgcagggttgcatcaacccagtggagacacaggatgat
gagaatttgagagtgaatgatttctga
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integrated database retrieval system
