Pleuronectes platessa (European plaice): 128444215
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Entry
128444215 CDS
T09923
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pplt03036
]
128444215 (chd9)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128444215 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
128444215
NCBI-ProteinID:
XP_053282529
LinkDB
All DBs
Position
1:complement(10537441..10614271)
Genome browser
AA seq
3018 aa
AA seq
DB search
MEFFDDPGLFVGGLEGLDEDEFPSAPSLVDELNLSADFEPLHQVEPLGPGKPPDIMPPIS
TQQVMPAYVQPMDHYIDIKGQNTTGQTFSGHRATGAGGGSIMPEQHGQYHNAAMSQVPQS
NGLFCNSSSPMWGNQDQNGNMFHPVSQQQQLPQQQRCHQQQLLHNQQLNVRQHIREQQHQ
PCHDPQQEQQHRMRQQLQQQQSHQQQLLNQCQPQQINTQTMPMQQQQHHNFSFHQGIQQV
HHSQQRAQHQLSVGGQRFQSRPLPNKSYLDGQNASLSGTCLQQHQQQHGSYRLTSGGQAF
SGSGLEDPNRPFPMHSSSMVLSLPTCSVSSAPAYQLAQYPAYPGEPEVPTLNQQSLSTAS
VSGPTLTTNVSLTSTVSELSGTVCQFPSTGVLNQQHTKTSGSQEDECPFRALHCPGEPQG
SSGSSEMFGESMSCYPTMASQLPSEQPQSCGAINTNGYQALGDRLLTSEAQDGDMEGLEP
PHLLPDLLPQLEVALSQQDESNCSWASSSFSSSLERRHEHRKPPPVEYKEEKPRKNANGP
GSQVRVLSPPVKSSSSSSSSSSSSSSSSSSSSEKRTSRMTHHQMETSPLEKQEKANRIIS
EAIAKARQRGEKNIPRVMSPESFPSSSSQYKSHRDRKHKGSGKARQKVKACRKACIVPSS
KPKQKAKIGKIVIKIGKKKKRKPESSEGESGDDPPTRHVSKDDSKRRSNRQVKRKKYAEE
LEARMSDEEVKVIVKAKKSNTAASKEHALQLFVENPSEEDAAVVDKIMSSRVLKKEVSPG
VVIEVEEFFVKYKNYSYLHCEWATEQQLVKDKRIQQKIKRFKMKQAHRALFFANMEEDPY
NPDYVEVDRVLEVSYCEDKDTGEEVVYYLVKWCSLPYEDSTWELKDDVDQGKIEEFEQLQ
AAKPDSRRMDRPPANLWKKREHSREYNSGNSLRDYQLEGVNWLLFNWYNRRNCILADEMG
LGKTIQSITFLEEIYRVGIKTPFLIIAPLSTIANWEREFRTWTNLNVIVYHGSMVSRQML
QQYEMYFRDTQGRVIRGAYKFQALITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCK
LLEGFKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEVQVQ
NLQGILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQS
NVPNLVNTMMELRKCCNHPYLIKGAEEKIMEDFREVYSPTAIDFHLQAMVQSAGKLVLID
KLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPD
SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLIT
RNSYEREMFDRASLKLGLDKAVLQSMSGRDNSLGGGGAGGGAVQQQLSKKEIEDLLRRGA
YGAIMDDEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDP
NFWDKWAQKADLDMDMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGESDSDETKPK
LRRNHDRLNSYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTDRDVESICRALLAYC
LVHYRGDDKIKSFMWDLIAPTEDGQTKELQNHLGLSAPVPRGRKGKKMKTQSSAFDIHKA
EWLRKHNPEHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGSQAQNVLDGVDFSEIK
IWVPEPDHSELPALWWDAISDKCLLLGIHKHGYEKYNTIRADPKLCFLDRVGRPDEKAIA
AEQRGNDFMDGDVDDPEYKPAPALLKDDMEDDASSPGDLVVTDNPGDPEAVPVREGETGY
WPSSSVLTARLRRLITASQRYTKSRQILHIHQSQSQSQQPMILSAPLCPLPPTLNDTLNP
KMAAKIERQQRWTRREEADFYRVVSTFGVVFDPTLGCFDWTKFRAMARLHKKTDESLQKY
LCAFTAMSRRVCRLPPKEGDSAVDPSLTIQPITEERASRTLYRVELLRQVREQVLRHTLL
FERLLLCQMSSDLPVWWEAGTHDRDLLIGAAKHGVSRTDYHVLRDPELSFMAAQRNYSQT
KTAQQQSHTSTPLLHTQHLAPSSALTGSPRPLVAQRDTESFGLVPKLEPTSEGEESKEKP
AESWSPRQAPATPTGLEEKPVLETRDKETQMVAARTKPLTPNSSERKPKKASKRSRRETR
RGSESNSDGSSSSSSSRSSSSSSSSSSSSHSGSSSSSSSSCSSGSSSTSSSSSSSSADSE
SEGEEGKKKVPLPTSVKGFDEDSVASLSTTQDETQDIHVAENGINHNASHPFQGGGYMLA
ASYWPKDRVIINRLDSICQAVLKGKWPGTRRVYEPGGAVASFYTTKLLDNANSLCEDPSA
SPQGSKVTKHVAENKEFSVKLNDQEGGLKLTFQKQGLPMKRPLESEDGPQAQQQYLARLH
ELQSASDTGLADITKPQCSFQTVPPALTGQMRLNGVLDGQPVVKKRRGRRKNVEGMDLLF
MNRSKVPSVPDQVPPGWGGIGQLGTGTTSAPSYSQSSSQVPADTECRVPVINLKDGTRLA
GDDAPRRKDLEQWMQEHPGFVADTGAYIPGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDV
NSLTGEERVQIINRRNARKVGGAFAPPLKDLCRFLQENPEYGVPPEWGDVVKQSGYLPAS
MYDRILTGPIVPEEVSRRGRRPKNPLAKAAAAAGEPTTVASSLGLNPLLANGLLSGMDLS
SLQAFQQNLQSLQSLQLTAGLMGLPSDASNLAASNLAAMFPMMLSGMAGLPNLLGLGGML
GKPAEEGAGGSEEKTKGTTSGAAGEPSASKAPSHTSDTKGERTERLSKTPSSASNSSSSA
TAPQSASAASAASSHPLSLNPLLLSSMLYPGMLLTPGLNLPASATQSQSSSTDPTLPPAP
FSPPTKPSKSLMRETVRPAGAEKDIDEDEALDDDDEEEEEEGEQKENSGPEGLGKETSSS
ESGSSSSSSDDSDSSDAD
NT seq
9057 nt
NT seq
+upstream
nt +downstream
nt
atggaattctttgatgatcccggcctctttgttggaggtctggaagggctggacgaggat
gagtttccctcagccccctcgcttgtggatgagctgaacctcagcgctgattttgagccc
ctccaccaagtggagcctctgggcccaggaaagccgccagacataatgcccccaatttct
acccaacaagtgatgcctgcttatgttcaaccgatggatcactatattgatattaaggga
cagaatactacagggcaaacattttctggtcatagagccacaggtgctggaggtggcagc
ataatgccagagcaacatggccagtaccacaatgccgccatgagccaagtgcctcagtca
aatggtctcttttgtaacagtagcagtccaatgtggggcaaccaagaccagaatgggaat
atgttccaccctgtatctcaacaacagcaacttccgcaacaacagcgttgtcatcagcag
cagctactgcacaaccagcaacttaatgtcagacaacatatacgagagcaacaacaccaa
ccctgccatgatccacaacaggagcagcagcacagaatgaggcagcagctgcaacaacag
caaagtcatcagcaacagctgttaaaccagtgccagccccaacaaattaacacacagacc
atgcccatgcagcaacagcagcatcacaatttctcctttcaccagggaattcagcaagtt
caccatagtcagcagcgggctcagcaccaactatctgtaggaggacagagattccaatca
aggcctctgccaaacaagtcttatttggatggtcagaatgcttctctgagtgggacttgc
ttacagcaacatcagcagcaacatggttcctaccgtttgacctcaggaggccaagccttc
tctggatcaggactagaagacccaaaccggccctttcccatgcattcatcttctatggtt
ctctccctgcccacatgctcagtcagttctgcccctgcttaccaactggctcagtaccct
gcttaccctggagagcctgaagtacccactctcaatcagcagtctttgtccacagcctca
gtgtcaggtcccacactcaccaccaatgtatctctcacttccacagtgtctgagctctca
gggacagtatgtcagtttccatccacaggagttttgaatcagcagcacactaagacctca
ggtagtcaagaagatgaatgtcctttccgggccctacattgtcctggcgaaccccaagga
agcagtgggtcatctgagatgtttggtgagtccatgagctgctacccaaccatggccagc
cagctgccttctgagcagcctcagagctgcggggccatcaacactaatggataccaggct
ttgggagatcgtctcctcacatcagaggctcaggatggagacatggagggactggagcct
cctcacctcttgcctgacctactgccccagctggaggttgctctcagccagcaggatgaa
tcaaactgttcctgggccagttccagtttcagttccagtttggagaggcgacatgagcac
aggaaaccaccacctgttgagtacaaggaagagaagccacggaagaatgctaatggtcct
ggcagccaggtacgagtcctcagccccccagtgaagagcagctcgtcgtcttcctcgtcg
tcctcctcgtcttcatcctcatcaagctcctcgtcagagaaaagaacatcgcggatgacg
catcatcagatggagacatctccactggaaaagcaagagaaggccaataggataatatca
gaggctatcgcaaaggcccggcagcgcggggagaagaacatcccccgggtcatgagcccc
gagagcttccccagctcttcctcacagtacaagtcccaccgtgaccgcaagcacaaagga
agcggcaaggcacggcagaaagtgaaggcatgtaggaaggcatgcattgtcccctcctcc
aagcccaagcagaaggccaagattgggaaaattgtcatcaagattggaaagaagaaaaag
cgaaagccagagtcttcagagggggagtctggcgatgaccctccaactcgacacgtctct
aaagatgattctaagaggagatctaatcgccaggtgaagaggaagaagtacgctgaggag
ctggaggccaggatgtccgatgaggaagtcaaggttatagtcaaggccaagaaaagcaac
actgcagcatccaaggagcatgcacttcaactctttgtagagaatcccagtgaagaagat
gctgctgttgtcgacaaaataatgtcttctcgtgtccttaagaaggaggtctctccagga
gttgtcatcgaagtggaggagtttttcgtaaaatataaaaactactcctacctacactgt
gagtgggccacggagcagcagctggtgaaggacaagaggattcagcagaagatcaaacgc
ttcaagatgaaacaagcacatagggcactcttcttcgcaaatatggaggaggacccctat
aaccccgactatgtagaggtagacagagtgcttgaggtgtcgtattgtgaggacaaagac
acaggagaggaggtggtgtactacctggtgaagtggtgctctctgccttatgaggacagc
acctgggagctaaaggacgacgtggatcagggcaagattgaagagtttgagcagctgcag
gcagccaagccagactcacgcaggatggatcgtcccccagctaatctgtggaagaagagg
gagcactcgagggaatacaatagcggcaacagcctcagggactaccagctcgagggagtc
aactggctcctcttcaattggtacaacagacggaactgcatcctggcagatgagatgggt
ctgggaaagactatccagtccatcacgttcctagaggagatctatcgtgtgggcatcaag
acgcctttcctcattattgcccctctctccaccatcgccaactgggagcgtgaattccgc
acttggaccaacctcaatgtgatcgtctaccacggaagcatggtcagcagacagatgctg
cagcagtacgagatgtatttcagggacacacagggtcgtgttataaggggcgcctacaag
ttccaggctctgatcaccacatttgagatgatcctgggaggctgtcccgagctcaacgcc
atagagtggcgctgtgttatcatcgacgaggcccaccgtctcaagaacaagaactgcaag
ctgctggagggcttcaagctcatgaatctggagcacaaggtcctgctgacagggactcct
ctccagaacacggtggaggaactcttcagtctgctccacttcctggaacctggacgtttc
ccctccgagaccaccttcatgcaagagtttggagacctcaaaacagaagtgcaggtgcag
aatcttcagggcatcctgaagcccatgatgctgcgacggttgaaggaggatgtggagaag
aagttggctccgaaagaggaaaccatcatcgaggttgagctcaccaatattcagaagaaa
tattaccgagccatcctggagaaaaacttctctttcctggctaaaggcgctggccagtca
aacgtgcccaatctggtcaacactatgatggagctgagaaagtgctgcaaccacccctac
ctcatcaaaggggcagaagagaagatcatggaggatttcagggaagtttacagccccact
gccatcgactttcacctgcaggccatggtgcagtctgccgggaagctggtcctcattgac
aaactgctgccaaagatgaaggcaggagggcacaaggtgctcatcttctcccagatggtg
cgctgcctggacatcttggaagactacctcattcagagaaggtacctatatgagcggata
gatggacgtgtgcgtgggaatctgcggcaggctgccatcgaccgcttcagtaagcccgac
tcggaccgcttcgttttcttactgtgtacacgggctggtggactgggaatcaacctcacg
gcagcagacacctgtatcatttttgactctgactggaacccacagaacgacctgcaggcc
caggctcgctgccaccggattggtcagaacaaggcggtgaaggtgtatcgcctgatcacc
aggaactcgtacgagcgggaaatgttcgatcgtgccagcctcaaacttggcctggacaaa
gcagtgctgcagagcatgagtggtcgagacaacagcctgggaggaggaggtgctggggga
ggggcagtgcagcagcagctgtctaagaaggagatcgaggatctcttgcgacgtggtgct
tacggggccatcatggatgacgaggatgaaggggccaaattctgcgaggaggacatcgac
cagatcctccaacgcaggacaaagaccatcaccatagagtctgaaggacgaggctccacc
tttgctaaggccagttttgtggcatctggaaaccgcacagacatttctctggatgacccc
aacttctgggacaagtgggcccaaaaggccgacctcgatatggatatggtcaatggcagg
aatagtttggtgatcgatactcctcgggtcagaaaacagacgaggccattcagcgccacc
aaggatgagttggcggagctttcagagggcgaaagtgacagtgacgaaaccaaaccgaag
ctccggcgaaaccatgaccgactcaacagttacgggcgcacagagtgtttcagagtagag
aagaacctgcttgtatacgggtggggtcgatggaaggacattcttaaccatgggcgtttt
aagaagcagttaacagaccgggatgtagagtcgatctgcagggctctactggcatactgc
ctggtccattaccgtggagatgacaaaatcaaaagcttcatgtgggacctgattgctccg
actgaggatggacaaaccaaggagctgcagaatcacctcggtttatctgccccagtcccc
cggggcagaaagggtaagaagatgaagacacagtcgagtgcttttgacatccacaaagca
gagtggctcaggaaacacaacccggagcacatgctgcaggacgatggctacaagaaacac
ctcaaacaccactgcaacaaggtgctgctcagggtcagaatgctctactacctgaaacaa
gaggtgataggaagccaggcccagaatgtgctggacggcgtggacttcagtgagataaag
atttgggtgccagagcccgaccattcagagctgccagccctgtggtgggatgccatctcc
gacaaatgtctactcctgggtatacataagcatggttatgagaagtacaacactattcgt
gcagaccctaaactgtgcttcctagaccgtgtggggcgaccggatgagaaggccatcgct
gccgaacagagaggcaatgattttatggatggggatgtggatgatccagaatacaagcct
gctcctgctctactgaaggacgatatggaggatgacgcctcttctcctggagacttggtt
gtaactgacaatcccggagatccagaagcagttccagtgagagaaggtgaaactggctac
tggccctcgtcctcggtgttgacagccaggctgaggcgtctgatcacagcctcccagcga
tacaccaaaagtcggcaaatcctccacatccaccagtctcagtctcaatcccagcagccc
atgatactgtctgctccgctctgcccgctgccccccaccctcaacgacaccctcaacccc
aagatggctgctaagatcgaacgccaacaaaggtggaccaggcgagaagaagctgacttc
taccgggtagtctccactttcggtgttgttttcgatccaaccctcggctgcttcgactgg
accaagttcagggccatggctcggctgcacaagaagactgacgagagcctgcagaaatac
ctgtgtgctttcaccgccatgagccgacgggtgtgccgcctgccacccaaggaaggagac
tctgcggttgacccgtctctcaccatccagcccatcacagaggagcgagcgtctcgcacc
ctgtacagagtagagctgcttcgccaggtgagggaacaagtccttcgacatacattactt
tttgagcgcctcttgctgtgccagatgagctctgacttacccgtctggtgggaagctggt
acccatgaccgtgatctgctaattggtgcggccaagcacggcgtgagtcgcacagactac
cacgttctgagagaccctgagctcagcttcatggctgcccaacgcaactacagccaaact
aaaactgcacagcagcaatcacacacatccacaccactcctccacactcagcacctggcc
cccagctcggcgttgacaggctctccgcggcctctggtggcccagagagacacagagtcc
tttgggcttgtgcccaaattggaacccacctcagagggggaggagagcaaggagaaaccg
gccgagagctggagtcctcgtcaagcaccagctactcccacaggtctcgaagagaagcct
gttcttgagacgagggacaaggagacgcagatggtggcagcacgaaccaaacctctcaca
cccaactcctcagagaggaaacccaagaaggccagcaagagaagccgtcgggagaccagg
cgtggctcagagtctaactcagatggctcctcttcaagctcttcatcccgctcctcctct
tcatcatcttcctcttcttcctcgtcacattccgggtccagctcctcctcctcttcatct
tgctcctctggctcttcatcaacgtcctcttcctcctcatcatcttctgctgacagcgaa
agtgaaggagaggaaggaaagaagaaggtgcctctaccaacaagtgtaaagggcttcgat
gaggacagcgtggcatcactgagcacaacacaggatgaaacacaggacattcatgttgct
gagaatggaatcaaccacaatgcctcgcatcctttccagggaggaggatacatgctcgct
gcatcctactggccaaaggatcgtgtgattatcaaccgcctagacagcatctgccaggca
gtgctgaagggcaagtggccgggtacacggcgggtatatgagcctggaggcgctgtggcc
tccttctacaccaccaagctgctggacaacgccaacagcctatgcgaggacccctctgcc
tcaccacaggggtcaaaggtgaccaagcatgttgcagaaaacaaggaattctcagtaaaa
ctcaacgatcaggagggaggtctgaagttgaccttccagaaacagggtctacctatgaag
aggcccttggagtccgaggatggccctcaggcccagcagcagtacctggcccgccttcat
gagctgcagagcgcctcggacacagggctggctgatatcaccaagcctcagtgcagcttc
cagactgtacctccagctcttactggtcagatgaggctgaacggagtactggacggccaa
cccgtggtcaagaagcgaaggggaaggaggaagaacgtagagggcatggacctgctcttc
atgaacaggagcaaagtcccttctgttcctgatcaggtacctccaggttggggtggaatc
ggccagttgggcacagggacgactagtgcaccaagctacagccagagctccagtcaggtc
cctgcagacacagaatgcagggtcccagtcatcaacctcaaagatggcacccgccttgct
ggggacgacgcccccaggaggaaagatcttgaacagtggatgcaagagcacccaggcttt
gtagcagatacaggagcttatattcctggggtaaataagatgcaaatgcagttccacttc
caggacggtcggcccaagcagaagaggcaccgctgtaggaatccaaacaagatcgacgtc
aacagcctaacaggagaggaacgagtccaaatcatcaacaggagaaacgcacgcaaggtt
ggtggagcctttgctcctcctctgaaggatctgtgcaggttccttcaggagaacccggag
tacggagttccacctgaatggggagatgtggtcaaacagtcgggttacctcccagcgagt
atgtatgacaggattctgacaggacccattgttcctgaggaggtgagtcgacgtggacgt
cgacccaagaatcctcttgcaaaggcagcggcggcggcaggagaacccaccacagtagcc
tcctccctcggcctgaatcccctgctggccaacggcctcctctccggaatggacctcagc
agcctgcaggccttccagcagaacctccagagtttacaatccctgcagctgaccgcaggc
ctgatggggctgccatccgacgcaagcaacctggccgcgagtaacctagccgccatgttt
ccaatgatgctatctggtatggccggactgcctaacctgcttggcctgggtggcatgctc
gggaagcccgctgaggagggcgcaggaggctcagaggaaaagacaaagggaaccaccagt
ggagcagcaggagagccgtctgcctctaaagccccttctcacacctcagacaccaaagga
gaaaggacagagagattgagcaagactccttcctcagcgtccaactcctcttcctcggcc
actgccccacaaagtgcttcagctgcctccgcagcctctagtcacccactgtctcttaac
cccttgttactctccagtatgctttacccagggatgcttctcactccaggccttaacctt
cctgcgtctgcaacacagtcgcagagctctagcactgaccccacccttcctcctgctcct
ttttctcctccgacaaaaccctccaagtctttgatgcgggagacagtacggccagcagga
gcagaaaaggacattgatgaggacgaggcgttggatgatgacgacgaagaggaggaggag
gagggagaacagaaagaaaacagtggtcctgaaggattgggtaaagagacgtcttcatcc
gaatctgggagctcctcctcatcctcagatgattcagactccagtgatgctgactga
DBGET
integrated database retrieval system
