Pleuronectes platessa (European plaice): 128444365
Help
Entry
128444365 CDS
T09923
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128444365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128444365
Enzymes [BR:
pplt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128444365
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
HECT type E3
128444365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
128444365
NCBI-ProteinID:
XP_053282797
LinkDB
All DBs
Position
7:3256035..3266145
Genome browser
AA seq
1011 aa
AA seq
DB search
MFSWGEDCHRVFWSKHPPVDGSAEARVHQFNPGYLIRGLSAGHSVLSFIKTNGDAFIIRT
HENKDGRRVRGKQKFVECREKLRAVSCTDDVVSLLTDSGSVLCVDTTRPPFTPRPMKELC
NIPVCQVACGSQHSVALTHDGRVYTWGQDSRGQLGLGQGKPFANSPQQLRSLSSTPLVQV
AAGGEQSFALSVSGGVFGWGRNDRGQLGLGDTTDRRTPAAVKGLNMKGTVHISCGKDHTA
TLTKGGAVFTFGSGQFGQLGHNSFSDQLRPRLVAELLGAKVTEIACGLNHTLVSTEAKKV
YSFGCGEQGQLGHGDESHPSVPLPVQLSQGSSDGPDIRNIFAGGNCSFATISSNEEAHEE
PNNDGVSNAPQSCLDDMIDKWTSECDAKTWKKIKQEIHRTFSTASCMNQSFLEKRKDKHF
QTSSKYHGMNLSLARLAFKRLVRKDDVLSEMVAAVLKLLPSFEDPVGVEGLRIFLLLNDL
LHVIQKLHRPQSTELAQAVAAAVLKLSAENLQVIGNWWTTLSASTISAYVRVWKKALSDL
LPSSLVLPRSSFRNLLQVLQYMYNANSRTSESQRLPDSDFYLLMDPIFLGLDLRQWTLQT
KQRMMDAEPLIVGRFPIVMDLTSKKLILDTYAEIIKQESYNKIGWNFYCMYGPDYLLAED
ALFRLKLRRASISEDTFEQLDAVLHKEYKKRLEIFFDANFTRSIVNIRDFFHDVFHELVS
EKSGMFTFNDSGTLAWFPSNATHDHHRYFLFGVLCGLALHNQCIIYLPFSMALFKKLLSV
KPSLEDLMEFSPDVGKSLLSILEEYGDKELESLGLDFLISWDGTDVDLDPTNPEKTVTSQ
NKKEFVDAYVNHVFNTSVESVFLEFKRGFYTVYDQDLLKVLRPKELQEVLQGKDFCDWKT
LKQNTLYEPPYQVDHPNMQMFWEVFDELTEDQKKKFLWFVTGFERLPILDNKSMIIRLKN
VGDVSQDQFYPEALTCHSFLDLPLYSTREIMKTKLTEALSNSRAERSENTL
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctggggagaggactgtcaccgggtcttctggtccaaacacccccctgtggac
gggtcagcggaggccagggttcaccagtttaacccgggttatctcatccggggcctgtct
gcagggcacagtgtgctcagcttcatcaagaccaacggagatgcttttatcatccggaca
cacgagaacaaggacggaagaagagtccgagggaaacagaagttcgtggagtgcagagag
aagctccgggctgtgagctgcactgatgacgtggtgtccctgctgactgacagcggctcg
gtcctctgtgtggacacaacgcgcccccccttcacaccaaggccgatgaaggagttgtgt
aacatacctgtttgtcaggtggcgtgtgggagtcaacactcagtcgccctgactcatgat
ggccgggtgtacacgtggggtcaggactccaggggccagctgggtctcgggcaggggaag
ccctttgccaactcaccccagcagctccgctccctttcgtccaccccgctggttcaggtc
gccgcggggggggagcagagcttcgccctctctgtcagtggaggtgtgttcggctggggc
agaaacgaccgtgggcagctcgggctgggagacacaacagacagacggacaccagctgct
gttaaaggtctgaacatgaagggaactgttcacatttcctgtgggaaggatcacactgct
actctaactaagggtggtgctgtgtttacgttcggctcggggcagttcgggcagctcggg
cacaactcgttctctgatcagctccgtcctcgtcttgttgccgagctgttgggggcaaag
gtcacagagatcgcatgtggactaaaccacacgttagtgtccacagaagccaagaaggtt
tactcctttgggtgtggagagcaagggcagctgggacacggagacgagagtcatccctct
gtgccgctccccgttcaactgtcacaaggcagcagtgatggtcccgatattagaaacatc
ttcgcaggaggaaactgttcatttgcaacaatctcgtctaacgaggaagctcatgaggag
ccaaacaatgacggggtcagtaatgccccacagtcttgtcttgatgacatgatcgacaaa
tggacgtctgaatgtgatgcaaaaacctggaaaaagataaaacaggaaatccacaggact
ttttccacagcatcttgtatgaatcaaagtttcctggagaaaagaaaagacaaacatttc
cagacctcatcaaagtaccatggcatgaacttgtcacttgcacgactcgctttcaagaga
ctggtgaggaaggacgatgttttgtcagagatggtggctgctgtcctgaagctgcttccc
tcttttgaggatccagtgggagtggaggggttgaggatcttcttgcttctcaatgatctt
cttcacgtgatccagaagctccatcgaccacagagcaccgagctcgctcaggccgtcgct
gctgccgttctgaagctgtctgctgagaaccttcaggtcataggaaactggtggacgaca
ctgtcagcctccaccatatctgcatatgttagggtttggaagaaagccctctcagacctg
ctgccctcaagccttgttcttccccgctccagcttcagaaatctgttacaagtcctccag
tacatgtacaatgccaacagcaggacctcagagtctcaaaggctgccagacagcgacttc
tatttgctcatggacccaatctttcttggtttggatctgcgtcaatggactttacagacg
aaacagaggatgatggatgctgagcctcttatcgttggtagatttccaattgtgatggat
ctgacgtcaaagaaattgattcttgacacgtatgctgaaatcatcaagcaggaatcatac
aataagattgggtggaatttctactgcatgtatggaccagattatctgcttgccgaagat
gcgctttttagactgaagctgagacgagcatccatttcagaagacacttttgaacaactg
gatgctgttcttcacaaggaatacaaaaaaagacttgagatcttttttgatgcgaacttt
acgcgaagcattgtcaacatcagagacttttttcatgacgtctttcacgagctggtatcc
gaaaaatcagggatgttcactttcaatgactccggaacacttgcatggttcccttccaac
gcaacacacgaccaccacaggtacttcctgttcggagttctgtgtggattggctttgcac
aaccagtgcatcatatacctaccattctcaatggctctgttcaagaagctgctcagtgtg
aagccttcgctggaggacctaatggaattcagtccagacgtcggaaagagtctgctgtcc
atcctggaggaatatggagacaaagagttggaaagcctgggcttggattttttaatcagc
tgggatgggacagacgttgaccttgatcccacaaaccctgaaaaaactgtgacaagtcaa
aacaagaaggagtttgtggacgcctacgtgaatcacgtcttcaacacatctgtggagagt
gtgtttctggagttcaagcgaggcttctacacggtttacgaccaggacttgttgaaggtg
ttgcgaccaaaggagctgcaggaagtcctgcagggcaaagacttctgtgactggaaaaca
ctgaaacagaacacactttacgaaccgccgtaccaggttgaccaccccaacatgcagatg
ttttgggaggtttttgatgaactaaccgaggatcagaagaagaagttcctttggtttgtg
actggttttgaaaggttgcccattcttgacaataagagcatgatcatcaggctcaagaac
gtcggtgacgtctctcaggaccagttctaccctgaagcactcacgtgccactcttttctg
gatctgcccctatactcaaccagggagataatgaaaaccaagctgacagaggccctgagc
aacagtagggcggaacgtagtgaaaacactttataa
DBGET
integrated database retrieval system
