Pleuronectes platessa (European plaice): 128444438
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Entry
128444438 CDS
T09923
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03022
Basal transcription factors
pplt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128444438 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
128444438 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pplt03021
]
128444438 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128444438 (gtf2h1)
Transcription machinery [BR:
pplt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128444438 (gtf2h1)
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128444438 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
128444438
NCBI-ProteinID:
XP_053282909
LinkDB
All DBs
Position
7:complement(15836467..15842102)
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AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKKVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLFADIRCQKISPDGK
AKVQLQLVLHTGESTTFHFSNDSSAIKDRDAAKELLQQLLPKFKKKANKELEDKNRMLQE
DPVLFQLYKDLVMSQVISAEEFWANKLGGVNNTDPALYDNKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYSENVPHNLTEKEFWTSFFQSHYFHRDRINTGTQ
DIFSECAKQDELGLKSMVTQGVKNPLVDLLSLEDKSLDEGYGVRTAMPSTSNANRTVKES
SNSAIIKRFNHHSAMVLAAGSGKGETPTDPASETSNTNGNSRDSDFLQPRVKKVKLQEAI
EYDDLQGENRPKTVPLNLKKSDRYAHGPVPLQSQQYTTSQEIINSVNYIRHEMANYKPNL
TQVLSSTAATSAITALSPGGVLMQAGTQQAINQMIPTDVQGELKHLYVAAGELLRHFWSC
FPVNTPFLEEKVTKMKTNLERFQMTKLRPFQEKIQRQYLSTNLTGHLEEMLQTAYNKFHA
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcatcactgtcagaagaagtgctgctggtggtgaagaaggttcgccagaggaagcaa
gatggaacactgtatctgatggctgaacgtatagcctggggtccggagggcaaggaccgc
ttcacagtcagccacctgtttgcagatatccgctgccagaagatcagcccggatggtaaa
gccaaagttcagctccagctggtgcttcacaccggcgagagcaccacattccacttttct
aatgacagcagtgcgatcaaagacagagacgctgcgaaggagctgctgcagcagctgctg
cccaagttcaaaaagaaagccaacaaggagctggaggacaaaaacaggatgcttcaagag
gatcctgtgcttttccagttatataaagacctagtgatgagccaggtgataagtgcagag
gagttctgggccaacaagttagggggcgtaaacaacacagacccagcactgtacgacaac
aaacaggaagtcggtatatctggagcctttcttgcagacatacgacctcagacagatggc
tgcaatggcttgagatataatctaactgctgacattattgaatccatcttcagaacgtac
cccgcagtgaaacagaagtatagtgaaaatgtgcctcataacctgacggagaaggagttc
tggaccagctttttccagtcccattattttcacagagaccgcatcaacacaggaacacag
gatattttctctgagtgtgccaagcaggatgagttggggttaaagtcgatggtgactcaa
ggagtgaagaatcctctggtcgacctcctgtcgttagaggataaatcattagatgagggt
tatggagtacgcacagcaatgccctcaacttccaatgcaaaccggacggtaaaggagagc
agcaactctgccattataaagcgcttcaaccatcacagtgccatggtgctggcagcaggc
tcaggaaagggggagacaccaacagaccctgcgagtgagacaagcaacacgaatggaaac
tccagggattctgacttcttacaacctcgtgtaaagaaggttaaattacaagaagcgata
gaatatgatgatctccaaggggagaacagaccaaaaacagtcccactgaaccttaagaag
tctgacaggtacgctcatggaccagtgccacttcagtcccaacaatatacaactagccag
gaaatcatcaactctgtcaactacatccgccatgaaatggccaattacaaacccaacctc
actcaggtgttgtccagcacagcagcgacttctgccatcactgcactttctccaggtggc
gtcctcatgcaggcaggaacacagcaagccataaatcagatgatacccactgatgttcaa
ggagagttgaagcatctctacgtagctgctggagagctattaagacacttctggtcctgc
tttcctgtcaacactccatttttggaagagaaggtgacaaaaatgaagacaaaccttgag
agatttcagatgaccaagcttcgaccttttcaggagaagattcagcgccagtacttaagt
acaaatctcacagggcacttggaggagatgctgcagacggcctacaacaagttccacgcc
tggcaaacccgtcggatgatgaggaaaacctga
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