Pleuronectes platessa (European plaice): 128444807
Help
Entry
128444807 CDS
T09923
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pplt03036
]
128444807 (tdrd12)
Enzymes [BR:
pplt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
128444807 (tdrd12)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Gene silencing
piRNA pathway
128444807 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Helicase_C
CS
Motif
Other DBs
NCBI-GeneID:
128444807
NCBI-ProteinID:
XP_053283438
LinkDB
All DBs
Position
7:27384261..27405882
Genome browser
AA seq
1409 aa
AA seq
DB search
MSKISILKVENPSCLWGRAVGSRGNNTETTEEYNSMLSQINLFYHGVTKDLCKLKPTSIE
EGQVCVVYWSVMKLWCRAVVESIIMDSVSCKARCLLVDHGERLVVASDQIRVAVQNFLQL
PFWVKRFHLARIQPTTLRVCVYQENAELISTAHWDSSATLYLHNLLQASTWTEAVLLESD
SDSTSIELYLTIGNIKICVNDDLVAKRFAYYTRESAASMELDEVDRFPNMLSSGILNQSV
STTLRKPTAVTQPPAGFLGSDRHQGRACDWLTAPCSPQSQQHELRTYNGCCRPNITEEQL
STGSQSRSSSQTAAAESDSSDDTDSSLAAALSRNLSLFKFLKFLNPGSSYQHATHSVGEL
EELNDCQPKESTLASSPCTGQEDCKSSSAESGPAEKEKTRSSELVGTCSRLLEWLNPEPL
NLDPEAGDDAVVPSEPRSNGILVHSALPVQPCTSLDDAPITEALRLVLQRKQYSTLSPAD
CYSWPAVSRGCNTIIVSHIADQPLSYLAPLLTHILLNSIFSSLTSSTGPIAVLLCPGWEK
VQQVYDLLEDFKISQVLHPIVLLLGVGKDEAKTVRIPKNCMLLVTTPFSFVRLLSCHCFM
FLRLHHLLLDEADQLFTFAPDEMEIILQHFHKVTSSEEKASSPQQLVAVAKRWTSQVEGL
LTNHMPYPCIVMTVPEEAALYGNVQQFILMTLESSKISELLGMLDFSPDVGQKTLIIANC
AQEVEDVFKAVSHKSAFCLKTHEGLTYQFDFVIQQWRKNIGPGTHVILVTTNECLKCLGI
RDASCVIHYGFPTSPKLFGSRLFSMSENFRNLSQRDQTASRSPVTRSVLLISERNAPHVV
GVVRYLGRTNALLPPELLSFGQGIHMAREDLKTNRPFCSYLKSLGVCRDSRACADRHKFI
SQLDQSDLPASGVIEVLPLYIKTASVFYGRIVRKDDNGFDGLASEMASYYADKKPGAGTE
LSEGGLYAVQEENTFHRVKILSVPDRGDHLFFTVLVRFIDIGKEEEVKSHQILQLPEQFH
SLSCQAVEIIVCRIKPVDAEIDWHPKVTRAISQRIRGLQHRARAVLSLGNTVFVDPMVRV
SQVPGMKTVINEYSVQSEILNTGMGVSNPEHLKLLRTLCQEAEDGSSKQAGHTYGLKDNS
LSLEVRIKAEEEVLAEVFRAAEARKLSDPPQLEPCQPSSPVSPMNHTPVQAPLACHLSLI
PVFEQEALSEIQAADEQRYNRSPDLKSAKQMMRDGGELCPMTNLAGCLNSCDSGGIESKS
QQVTISTKEKNYDEKSFHPQIRWYQMSDAVIVTVKLINPESQRCDFYLDRVVYSGRVNSQ
SYRADLELKGNIAVDRCCWEMKSNEPVLKLVKQQKVPWEKLLRNKNIFVSYDVEHLEKNE
DKAPNSLWFVGNTGKDNWYVNSESGSESD
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaatatctattcttaaggttgagaatccctcctgtctctggggtcgggccgtt
gggagtcggggcaataacacagagacgacagaggagtacaacagtatgttgtctcagatt
aacctcttctaccacggtgtaactaaggacctgtgcaaactgaagcccacgtcaatagag
gagggacaggtgtgtgtggtgtactggtcagtgatgaagttgtggtgtcgggccgtggtg
gaatcaattattatggactctgtatcctgtaaagctcgctgcctgctggtcgatcacggc
gaacgtctcgtcgttgcttcagaccagattcgagttgctgtacagaacttcctccagctg
ccattttgggtgaagaggttccacctggcacgaatccaaccaacaaccctgcgagtgtgt
gtttaccaggagaatgcagagcttatttcgaccgctcattgggacagctcagccacgctc
tacctacacaacctgctacaagcgtcaacttggacagaggctgtgttgcttgaatctgac
tcagactccacctccatcgagctttacctaactattggaaacatcaagatctgtgttaat
gatgaccttgtggccaagaggtttgcatattacaccagagagtctgcggcaagcatggag
ttggatgaggtggatcgatttcccaacatgttgtcctccggcatcttaaaccagagtgtc
tccacaaccttacgcaagccgacagcagtaacacaaccacctgctgggtttttgggcagt
gatagacatcagggtagagcatgtgattggctgacagctccctgttcgcctcagagccaa
cagcatgagctgaggacctataatggatgctgtaggccaaacatcacagaagaacaactg
tctactggcagccaatcacggagcagctctcagactgctgctgcagagagtgactcatca
gatgacactgactcctctctggctgcagctctgagcagaaacctcagtttgttcaagttc
ctgaagtttctgaatcctggcagcagctatcagcatgcgactcacagtgtgggtgagctt
gaagagctgaatgactgtcaacctaaagagtcaactttggcctccagcccctgcacagga
caggaagactgcaaaagtagttcggcagagtcaggaccggcagagaaagagaagacgagg
agcagtgaattggtcggcacttgttcacggcttttggagtggttgaaccccgagcctctg
aaccttgatccagaagctggagatgatgctgttgttcccagtgagcccaggtcaaatggg
attctggtacactctgcactcccagttcagccctgcaccagtttggatgatgcccccatc
actgaagctctccgcttggtgcttcagaggaagcagtacagcactctgtctccagctgac
tgttacagctggccagctgtgtctcgaggatgcaacaccatcatcgtgtcccacattgct
gaccagccgctcagctacctagcacctctcctcacccacatcctactcaactccatcttc
agttccctcacctccagcacagggcccatagcagtgctgctgtgtccaggctgggagaaa
gtccagcaggtgtatgacctgctggaggatttcaagatcagccaggtgctccatcccatc
gtcctgctgctgggtgtagggaaggacgaggccaagactgtcaggatcccgaagaactgc
atgctgttagtgaccacaccctttagttttgtccgtctgctgtcttgtcactgcttcatg
ttcctgcgacttcatcacctgctgttggatgaggccgaccagctcttcactttcgctccg
gatgagatggagatcattttgcagcatttccataaggtgacctccagcgaggagaaggcc
tccagtcctcagcaacttgttgccgtggcgaaaagatggaccagtcaagtggagggattg
ttaaccaatcacatgccatacccctgcattgttatgactgtccctgaggaagctgctctc
tacggtaacgttcagcagttcatactcatgactctagagagcagtaagatctcagaactg
ttggggatgttggatttcagcccagatgttggacagaagactctgatcatagccaactgt
gctcaagaagtcgaagatgttttcaaggccgtgagtcacaaatctgctttctgcctcaag
actcacgaaggattaacttaccagttcgactttgtcatccagcagtggaggaaaaacatc
gggcctggaactcatgttattctggtgaccaccaacgaatgtctgaagtgtttaggaatc
agagatgcatcttgcgtcatccactacggtttccccacttctcccaagctgtttggcagt
cgactcttcagcatgtctgaaaacttcagaaacctctcgcaacgggatcaaacagcgagc
cgctctcctgtcaccaggtcagtgctgttgatctcagagagaaacgctcctcatgttgtg
ggagttgtgcgttacctgggacgaactaacgccttgctgccccctgagctactgtctttc
ggccagggcatccatatggccagagaggacctaaagacaaacaggcctttctgcagctac
ctgaagagccttggagtttgcagagatagtagagcatgtgccgaccgtcacaagttcatt
tcccaattggatcagtccgaccttcctgcatctggtgtcatagaagttttacctctctat
atcaagacggcatcagtcttctatggtcgcatcgtcaggaaagatgacaatggttttgat
ggcttagcatctgagatggcttcttactatgctgataagaaaccaggagcaggcacagag
ttgtcggaaggaggcttatacgcggtgcaggaggaaaacaccttccacagggtgaagatc
ctctccgttcctgacagaggtgaccacttgtttttcacggtcttagtgcggtttattgac
attggaaaggaagaggaggtgaaatcccatcagatccttcagctgccggagcagtttcac
tctctgtcctgccaggctgtggagatcattgtctgccgcatcaaaccagttgatgccgag
atcgactggcacccaaaggtcaccagagccatcagtcagaggatccgaggtctgcagcac
cgcgccagagcagttctcagtctgggaaacactgtctttgttgatcccatggtccgggtg
agccaagtgcctggaatgaaaactgtcatcaatgaatacagtgtccagtctgagattctg
aatactggaatgggagtcagcaacccggagcatctaaaactgctgaggacactgtgccag
gaggcggaagacggcagcagcaaacaggcaggccacacatatgggttgaaggacaattcg
ttgtctcttgaagtcaggatcaaagctgaggaagaagttctggctgaagtcttcagagca
gccgaggccaggaagctctctgaccctcctcaacttgagccatgtcagccatcaagccca
gtatctccaatgaaccacaccccagtccaagcaccactagcttgtcatctcagcctgatc
ccagtgtttgagcaggaagctctctcagaaattcaggctgcagatgaacagagatacaat
cgcagtcctgatctaaagtcagctaaacagatgatgagagatggaggagaactttgtccc
atgaccaacctggctggttgtctcaactcctgtgatagtggcggcattgaaagtaaaagc
cagcaggtcaccatcagcactaaggaaaaaaactacgacgaaaaaagtttccatcctcag
atccgctggtaccagatgtctgacgctgtgattgtaacagtgaagttgatcaacccagag
agtcagcgctgtgacttctaccttgacagggtcgtctacagtggcagagtgaacagtcag
tcctacagagctgacctggagcttaagggcaacattgctgtggaccgctgctgctgggaa
atgaagtccaatgagccagtcctcaaactggtcaaacaacagaaggttccctgggaaaaa
ctgctcaggaacaagaatattttcgtgagttatgatgtggagcatttagagaagaatgaa
gacaaagcaccaaatagtctgtggtttgtggggaacacaggaaaggataactggtatgtg
aactcggagagtggcagtgagagtgactga
DBGET
integrated database retrieval system
