Pleuronectes platessa (European plaice): 128444895
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Entry
128444895 CDS
T09923
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128444895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pplt03021
]
128444895
03036 Chromosome and associated proteins [BR:
pplt03036
]
128444895
Transcription machinery [BR:
pplt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128444895
Coactivators
SAGA/TFTC/STAGA complex
128444895
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128444895
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
SH3_20
Motif
Other DBs
NCBI-GeneID:
128444895
NCBI-ProteinID:
XP_053283556
LinkDB
All DBs
Position
7:complement(246497..261700)
Genome browser
AA seq
969 aa
AA seq
DB search
MAGASDPLEDMLFTEVDEKAVSDLVGSLESQLGDRKTPAPSLSDGTREAAPAAAAQFSGK
VLDQVGSAEPQQGHPKAGLTQEPGAKPPLSAPSLSASTSSVAPGAAITTGAGLQTVGAAP
PTAFPGPGPVTLLTPPAAAASFSRAAVAPSAAPSPSAGPVADGSRSGSPALLSLNGNGGA
AKLVNSPAVAPPAGGSTVISAVSAGGSAVINPMTSQPTFPGPAPTVVLQRQPGPAATVTQ
NGLDPKVVTQGAPPASSPQVMNHSTMHTKMLVPSQPVSGNTVILTSTASAVQSPITQTVS
SPAAITLTGVKPAMNGLAQPAVAVVRPPGGPLVATSLQQQRPAMVASSTRAAAPQLPLAV
RPQQQTTIQLPPGFTMPAGMVLVRTETGQLVMVPQQVLAQAQAKTQQAQTVANLNQRPAT
PTAGATIRVRPVLTAPVTSHTVRLASPAPARMVQSPSTTTVQKAITVAPGGAAVSVKMTT
PQKAPTVITAGGTSAAKPAAPLTPTTPAATPPTRVTVVSQEMQENVKKCKNFLATLIKLA
SHNSPSPDTSKNVKALVQDLLDAKIEPEEFTTRLQAELKSSPQPYLIPFLKKSLPALRQS
LLSSQQSLSVPSTSTPPPAAPGSISTTAIRPRLPVSPASSTIKLNTPLTNATALAVGRAG
VQTVQSRSPVVISQTLRPQATLIRGSPTIVGRSLVNLASQANQKKLSDPGGGTFRDDDDI
NDVASMAGVNLNEENARILATSSELVGTKIRSCKDEAFLPPGLLHRRILDTAKKLGVSEV
PLEVVNFISHATQSRLRSLLEKVSAVAQHRTDGGKDEDHHEQSSDARSQIRFFEQLERME
KQRKDEQEREILLKAAKSRARQEDPEQARLKLKAKEMQQNELFQMRQRDANLTALAAIGP
RKKRKLDSPGGAAAPEVASGSGAGPSASPSSRQQLRQRITRVNLRDFIFCLEQDRSTARS
LMLYKALLK
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccactggaggacatgctcttcacggaggtggatgaaaaagcc
gttagcgacctggtgggttcgctcgagtcgcagctgggcgacaggaagactcccgcccct
tcgctttccgacgggacccgggaggcagcgccggcggccgcggctcagttctcagggaaa
gtgctcgaccaagtggggtctgctgagccgcaacaagggcatccgaaagcggggttaacc
caggagcccggcgccaagccgccgctgtccgctccgagcctctccgcctctacctcctcc
gtcgctcccggggccgcgatcaccaccggagccgggctacaaactgttggagctgctccc
ccgactgctttccccggaccgggacccgtaactttgcttactccgcccgccgccgctgct
agcttctcccgggcggctgtggctccgagcgcggctcccagcccctctgccggcccggtg
gcggacgggtcccggagcggatctcccgctctgctcagtttaaacggaaacggcggagcc
gcaaagttggtgaactcgcccgcggtcgcgccaccggccggaggcagcaccgtgatcagt
gctgtcagtgccggggggtccgcggtcatcaaccccatgacttctcagcccactttcccg
ggaccggctcccaccgtggtcctgcagagacagcccggccccgcggccaccgtcacccag
aacgggttggaccctaaggtggtgacccagggcgcccccccagcctccagccctcaggtg
atgaaccacagcacgatgcacaccaagatgctggtgcccagtcagcctgtgtccggaaac
accgtcatcctgaccagcaccgcctctgcagtccagtcccccatcacccagaccgtgtcc
agtccggctgccatcaccctgacaggggtcaagcctgccatgaacgggctggctcagccc
gcggtggctgtggtgaggcctccgggcggccccttggtggccacctccctccagcagcag
agacccgctatggtggcgagctcgacccgggcagctgcccctcagctccctctggctgtc
cggccccagcagcagaccaccatccagctgccccccggcttcaccatgcctgcaggtatg
gttctggtgcggacggagacgggtcagctggtcatggtccctcagcaggtcctggctcaa
gctcaggccaagacccaacaggcccagacggtggccaacctgaaccagagacctgccaca
cccacggctggggccaccatccgggtacgtccggtactgaccgctcctgtcacatcccac
accgtccgcctggcctcccccgctccagccaggatggttcagtctccctccaccaccact
gtgcagaaggccatcaccgtggcccctggcggtgcagcggtgtctgtgaagatgaccaca
cctcagaaggctccaacggtgataacagccggggggacgtccgcagccaaacctgccgcc
cccctgacccccacgacccctgctgccacgccccccaccagagtcaccgtggtgtcgcag
gagatgcaggagaacgtgaagaaatgcaagaacttcctggccacactcatcaagctggcg
tcccacaattctccctccccagatacctccaagaatgtgaaggccctggtgcaggacctg
ctcgatgctaagatcgagccggaggagttcaccactcggctgcaggccgagctgaagtcc
tcccctcagccctacctcattcccttcctcaagaaaagtctccctgccctgcgtcagtct
ctgctcagcagccagcagtctctgagtgtccccagcacctccaccccccccccggccgcc
cccggctccatcagcaccaccgccatcaggccccggctgcccgtcagtccggcgagcagc
accatcaaactgaacacgccgctcactaacgcaaccgctctggccgtgggcagagccgga
gtccagacggtccagtcccggtcgccggtcgtcatcagtcagaccctcagacctcaagcg
acgctcatcagaggatctcccaccatcgtcggcaggagtctggttaacctggcgtctcaa
gccaatcagaagaaactaagcgacccagggggcgggacgttcagagatgacgatgacatc
aacgacgtggcgtccatggccggcgtcaaccttaacgaggagaacgcccggatcctggcc
accagctcggagctggtgggcacgaagatccgctcgtgtaaagacgaagccttcctgcct
ccggggctgctgcaccgccgcatcctggacacggcaaagaagctgggtgtgagcgaggtg
ccgctggaggtggtgaacttcatctctcacgccactcagtccagactgcgctcgctgctg
gagaaggtgtcggccgtcgctcagcatcgaacagacggaggaaaggatgaagatcatcac
gaacagtcgtcagacgctcgctcgcagattcgcttcttcgagcaactcgagcgaatggag
aaacaaaggaaagatgaacaggagagagagattctgctgaaggctgcaaagagtcgtgcg
agacaagaggatccagaacaggctcgcctgaagctgaaggccaaagagatgcagcagaac
gagttgttccagatgcgacagcgagacgcgaacctcacggccctcgccgccatcgggcca
cgcaagaaacgcaagctggactccccgggcggagccgcggcgcccgaggtggcctcaggc
tcgggcgccggcccctctgcgtccccctcctcccgccagcagctccgtcagcggatcact
cgtgtcaacctcagggacttcatcttctgtctggagcaggaccgcagcacggcccgctcg
ctgatgctctacaaggcgctgctgaaatga
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