Pleuronectes platessa (European plaice): 128444931
Help
Entry
128444931 CDS
T09923
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128444931 (ctcf)
03036 Chromosome and associated proteins [BR:
pplt03036
]
128444931 (ctcf)
Transcription factors [BR:
pplt03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
128444931 (ctcf)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128444931 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-WIZ
zf-C2H2_ZN142
Roughex
Motif
Other DBs
NCBI-GeneID:
128444931
NCBI-ProteinID:
XP_053283616
LinkDB
All DBs
Position
7:28211215..28228439
Genome browser
AA seq
856 aa
AA seq
DB search
MDAGPSEGVGEVEVHSQDAMVADLLQQAAEAGGVLDGQAGVILEQGHGEELVAAAQRQLM
EAGVGVEDGPGVEMMVMDSLDPTLLQMKTEVIDATVGGSSAGSAHQATVTTVDQTQIITL
QVVNMEEQAALGLGELQLVQMPVSATTVEALQQGTFVDTTAMPKDGDPVICHTLPLPEGF
QVVKVGANGEVETVEQEEEGGQGHHEEEDEEVGNQLLEEGEDGPIKTPNDDPNWAKDPDY
QPPSGILKKTKKGKKSRLRYAEGDKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKP
TKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLN
THTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHT
GERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENV
AKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCDAVFHERYALIQHQKSHKNEKR
FKCDMCDYCCRQERHMVMHRRTHTGEKPYACSQCEKTFRQKQLLDMHFKRYHDPNFIPTA
FVCPKCSKTFTRRNTMARHSDNCSGEVEDAENGTPTPKRGRRGRKRKMRSRRDDDDDSEE
DPVEPDEEEEGEGEEELPLLQEDEDPESMELDQAPAAIPIPAPDEPPVKRKRGRPPKNAP
KPPTPIKSVRVAAKTKAAAAIIQVEDESTGAVENLIVKKEEGDTPSATPLEQGVALAVEG
VGLEGEGVDTVELAVNEETAAAAANGDLTPEMILSMMDRSHDGAFGVAAQTGDSKNIHAQ
RKEAACKYFQSNFTSM
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagggccatcagagggtgtaggggaggtggaggtccacagccaggatgccatg
gttgctgacctcctccagcaagctgcagaggccgggggcgtgttagacggacaagctgga
gtcatccttgaacaaggtcatggggaagagttggtagcagccgcccagcgacagctaatg
gaggccggggttggtgtagaagatggaccaggtgttgaaatgatggttatggactcactg
gaccccactttgctgcagatgaagactgaggtgatagatgctacagtgggggggtcatca
gctggttctgctcaccaagcaactgtcacaacagtggaccagactcaaatcatcacgcta
caggtggtcaacatggaggagcaggcagctttaggcctgggagagctgcagctggtccag
atgccagtttctgccaccactgtggaggccctgcagcaaggcacctttgttgacaccact
gcgatgccaaaggatggagacccagtcatttgccacaccctgccacttccggagggcttc
caggtagttaaggttggtgctaatggggaggtggagaccgtggagcaagaagaggaggga
ggacaaggccaccatgaagaggaagatgaggaggtgggcaaccagctgttggaagaaggg
gaagatgggcccattaagactccaaatgatgaccccaactgggctaaagatccagactat
cagcctccatctggaattttgaaaaagaccaaaaagggaaaaaagagtcgcctgcgttac
gctgaaggagataaggatatggacgtcagtgtctatgactttgaagaagagcagcaggag
ggccttctgtctgaggtcaatgctgagaaagtggtgggcaacatgaaaccacccaaacct
acaaagatcaagaagaaaggagtgaagaagacatttcagtgtgaactctgcagctacacc
tgccctcggcgctccaacctggacagacacatgaagagccacacagatgagagaccacat
aaatgtcatttgtgtggaagagcctttaggactgtcaccttgctaagaaaccatctcaac
acacacaccggaactcgtccacacaagtgcacagactgtgatatggcttttgtgactagc
ggagagctggttcgtcatcgtcgctacaaacacacacacgagaaacccttcaaatgctcc
atgtgcgactatgccagtgtggaggtgagtaaactaaagcgtcacattcgatcccacact
ggtgagcgtccattccagtgcagtctctgcagctacgccagtagagacacgtacaagctg
aagagacacatgaggacacactcgggagagaaaccttatgagtgctacatctgccatgcc
cgttttacccagagtggaaccatgaaaatgcacattctgcagaaacacacagaaaacgtg
gcaaaattccactgtccacactgtgacacggttatcgcacggaagagtgacttgggtgtc
catcttcgaaagcagcactcgtttattgagactggaaagaagtgtcgttactgtgatgca
gtctttcacgagcgctacgctctgatccagcaccagaagtcccataagaacgagaaaagg
ttcaaatgcgacatgtgtgactactgctgccgccaggagcgacacatggtgatgcatcgt
cgtacccacactggagagaaaccatatgcctgcagccagtgtgaaaaaaccttcagacag
aagcagctgctggacatgcacttcaaacgctaccacgaccctaactttatccccaccgcc
tttgtatgccccaagtgtagcaagaccttcactcgcaggaacaccatggcacgccactct
gacaactgcagtggtgaggttgaggacgctgagaacggtactcctaccccaaagagaggg
agaagaggaagaaagagaaagatgaggagcaggagagatgacgatgatgacagtgaagag
gatcccgttgaacccgatgaggaggaagagggtgagggagaggaagaattaccactgcta
caggaagatgaggacccagaaagcatggaattggaccaggcccccgctgccattcccatc
ccagcccccgacgagccaccagtcaagaggaaacgaggccgaccccctaagaatgcccct
aagcctccgacacctatcaagtcagtcagagtggctgccaagacaaaggctgctgctgcc
atcattcaggtggaggatgagagcactggagcggtggagaacctcatagtgaagaaggaa
gagggtgacacgccttcagcgacaccgctggagcagggagtggccctggcagtggagggg
gtggggctggagggggaaggggtggatactgttgagctggctgtgaatgaagaaacggca
gctgctgccgccaatggcgatcttacgccagagatgatcctgagcatgatggaccgcagc
catgatggcgcctttggagtggctgcacaaactggtgacagcaaaaatatccatgcacaa
agaaaggaagctgcatgtaaatacttccaaagtaacttcacatccatgtag
DBGET
integrated database retrieval system
