Pleuronectes platessa (European plaice): 128445087
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Entry
128445087 CDS
T09923
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04110
Cell cycle
pplt04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128445087 (smc1b)
04114 Oocyte meiosis
128445087 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pplt03036
]
128445087 (smc1b)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
128445087 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
128445087 (smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
Ca_chan_IQ
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
128445087
NCBI-ProteinID:
XP_053283827
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All DBs
Position
7:27001849..27017762
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AA seq
1253 aa
AA seq
DB search
MGYLKQIDIENFKSWRGKQVIGPFMRFNCVIGTNGSGKSNVMDALSFAMGERAALLRVKH
LGDLVHGAHIGQPVSSTARVSIRYRDDQEQETVFRRSITGNTSEYRINGVQVSLVKYLEE
LKKIGVVTKARNCLVLQGAVESIALKDPKERTKMFELISQSGEFAAEYDKKKAALLKARE
NTQFQFNMKKSATVERKQVSQEKIEAQKYQSMVDDLHQNRLQLSLAELYYNERGINTLSD
IQKEKQLAAAAKNNKVVSSEHMVKTDKKEQGRLTREQQHTEKEIRAQEHILSQARSQYIK
AKVNTTHHMKKAEEVSYALKKGQSVLAIKKQDLAEGRREIAELDRTWKNYEEQAQQQGAS
HRRDIELEEDQLERYKDLKKLAQKQATVLSQQAEKLQWEVKADCEKMAFDQCRKKEVEVG
IRSNRTQLEDLTRRTEKLEEYTRTCKSSLEEYGQQEVRLNAELQHGRQRSQEVNQEMGQV
LEELGNARLYTQESRRQLQRKEMREKLRRLYPESVYGQLLDLCSPIHKKYQLAVTKVFGR
YMNAIVVTTEKVARDCISFIKEEHYEPETFLPIDYLDVTPLNERLRELPGAKMMVDVVQV
NAAAGAAQLRKVVQFVCGNTLVCETIKEARSMAFDRQERNKTVALDGTLFAKSGVISGGS
SDLRSKARCWDEKDMTHLRERKEQLTAELRTLMRLKRKESDLNQIIAQAHGAQTRLKYSK
NELANLRKINILHCQAEISRMESELANLDSQIKMQQESVEAKDATMRRIRDQIDQIEDLV
FADFCAEIGVDSIREYEQEYLKQQEELDKKRLEFESQRARLSAQLEYEQDQLKQQIEKLC
KMEATINKEKRSMAEQKKDEEQLLLLVEEAQNKLLEVNNRLLSNKNQVAAAKAELDQKTQ
RLQEIKQELVKLQREVMSAESALEQKRLARHNLLLACKIQSLPITLLSGSLDEISRVQPD
TESESTSATMDIYEREAQLVIDYSDLEAELRSLQGEKEVEASLEKLKESVSAIESELHRT
TAPNLKALEKMIEVKDKCQGVTEAFEASTKVTKKCNQEFEHVKTQRLHLFNQCFEHVSVV
IDQIYKRICRNSSAQAILTPDNPEEPYLGGINYNCVAPGKSFMSMDNLSGGEKSIAALAL
VFAIHSFRPAPFLVLDEVDAALDNTNINKLTSFIRKESRKNMQIIVISLKEEFFSKADAL
LGVYSDFAECMFSRMLTLNLQQYPLVEENNGKLTDKEERVDQTQDSRGLESSA
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgggttatctgaaacaaattgacattgaaaacttcaagtcatggcgagggaagcaggtt
attggcccgtttatgcgatttaattgtgtaattggcacaaatggttctggcaagtccaat
gtgatggacgccctgagcttcgccatgggggagcgggctgccctcctccgggtaaagcac
cttggagacctggttcacggagcccacatcggccagcctgtgtccagcacggcccgggtc
tccatccggtaccgtgacgaccaggagcaggagacagtcttccgtcgtagcatcaccgga
aacacctctgagtatcgcatcaacggcgttcaagttagtctcgtcaaatacttggaagag
cttaagaagattggcgttgtgaccaaagcccgaaactgtctggtgcttcagggggcagtg
gagtccattgctttgaaggacccgaaggagaggacgaaaatgttcgagctaatcagtcag
tcgggagagtttgctgcagagtacgataagaagaaagcggctctgcttaaggccagagag
aatacacagtttcagtttaacatgaagaagtctgccaccgtagagaggaagcaggtgtcc
caggaaaaaattgaggcccagaaataccagtcaatggttgacgaccttcaccaaaaccgc
ctgcagctaagcctggctgagctctactacaatgagaggggtatcaacactctcagtgac
atccagaaggagaaacagctggctgcagctgcaaagaacaataaagtggtgagctcggag
cacatggtcaaaactgacaagaaggaacagggacgtcttactagagagcagcagcacact
gagaaggaaattcgtgcccaagaacatatcctgtctcaggctcggtctcagtacatcaaa
gccaaggttaacaccacccatcacatgaaaaaggccgaggaggtcagttatgccctgaag
aagggtcagagtgtgctggccatcaaaaagcaggacttggcagagggtcgacgggagatc
gctgaactggacaggacctggaagaactacgaggagcaggcccagcagcagggagcttcc
cacaggagggacatcgagctggaagaggatcagttagagcgatacaaggacctgaagaag
ctggctcaaaagcaggcaactgtcctcagccagcaggcagagaaactgcagtgggaggtg
aaagcggactgcgaaaagatggcctttgaccagtgcagaaagaaagaagttgaggttggc
atcaggagcaaccgcactcagctggaagatttgacacgtagaacagagaagctggaggag
tacaccaggacctgcaagtcgtcccttgaggagtatggtcagcaagaggtgcgtcttaat
gcagagctgcagcatggacgccagcgcagccaggaggtgaaccaggagatggggcaggtg
ctggaggagctgggtaatgcccgtctgtacacacaggaaagccggcgccagctgcagcgc
aaagagatgcgagagaagctacgcagactttaccctgaatctgtgtatggtcagctgttg
gacttatgcagtccaatccataagaagtaccagctggctgtcaccaaggtgtttggccgt
tacatgaatgctattgtggtgaccacggagaaagtggcgcgtgactgcatctcttttatt
aaggaggagcattatgaacctgaaacctttctgcccatcgactacttggatgtgactcct
ctgaatgagagactgagggagctgcctggcgccaagatgatggtggatgttgtccaggtg
aacgctgctgcaggtgccgcccagctgagaaaagtagtgcagtttgtctgtggcaatacc
ttggtgtgtgagacgatcaaagaagctcggagcatggcctttgacagacaggagcggaat
aagaccgtagcgctggacgggacactgtttgcaaagtcaggcgtgatctctggaggctcc
agtgatctgcggagcaaagctcgctgctgggacgagaaagacatgacacatctgagggaa
cgtaaggagcagcttacagctgagctacgcactctgatgaggctgaagagaaaggagtca
gacctgaaccagatcattgctcaggctcatggtgctcagacccgcctcaaatactcaaaa
aatgagctggcaaaccttcgcaaaataaatatccttcactgccaagcggagatttctcgt
atggagagtgaattagcaaacctggactctcagatcaagatgcagcaggaaagtgtggag
gcaaaggatgcaacgatgagaaggatcagagaccagatcgatcagatcgaggacctggtg
tttgctgacttctgtgctgagatcggtgtggacagcatccgagagtatgagcaggaatac
cttaaacagcaggaagagcttgacaagaaaaggctggagtttgagtcacagcgtgctcgt
ctgagtgctcagctggagtacgaacaagaccaactaaagcagcagatagagaagctttgc
aaaatggaggcaactatcaacaaggagaagaggtcaatggcagagcagaagaaggatgag
gagcagctgctgctgctggtggaggaagctcagaacaaactgctggaggtgaacaacagg
ctgctgtctaataagaaccaagtggctgctgccaaagctgagctggaccagaaaacccaa
aggcttcaagagatcaaacaagagttggtgaagcttcagcgtgaggtgatgtctgcagag
tcggctttagagcagaaacgcttggccagacacaacctactgctggcctgcaagatccag
agtctgcccatcactctgctgtcagggagcctggatgaaatcagtagggtgcagccggac
acagaatcagaaagcacttcagctaccatggacatctacgagagagaggcacaactcgtc
atcgattactctgatctggaggctgagctcaggagtctgcagggagagaaggaggtagag
gcttcactagagaagctgaaggagtcagtgtccgccatagagtcagaactgcatcgcacc
actgcccccaacctgaaagctctggaaaagatgattgaggtgaaggacaagtgtcaggga
gtgaccgaagcctttgaagccagcaccaaagttaccaaaaagtgcaaccaggagttcgag
catgtcaaaacccagcgcctccacctcttcaaccagtgcttcgagcatgtgtctgtcgta
attgatcagatctataaaagaatttgcaggaacagcagtgctcaggccattttgactcca
gacaatccagaggaaccataccttggcggcatcaactacaactgtgtggcgcctggaaaa
tccttcatgtccatggacaatctgtctggtggagaaaagtctattgctgctctggccctg
gtgtttgctattcacagcttccgccctgctcctttccttgtcttggatgaagtggacgca
gccttggacaacactaacatcaacaagttgaccagtttcatcagaaaggagtccagaaag
aacatgcagatcattgtcatctccctgaaggaggaattcttctccaaggcagatgctctg
ctgggagtctactcagattttgctgagtgcatgttcagccgcatgctgaccctgaacctg
cagcagtaccctctggttgaagaaaacaatggaaaacttaccgacaaggaggaaagagtg
gaccaaacacaggattccagaggcctggagtcctccgcctga
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