Pleuronectes platessa (European plaice): 128445148
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Entry
128445148 CDS
T09923
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128445148 (lingo1a)
Membrane trafficking [BR:
pplt04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
128445148 (lingo1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
128445148
NCBI-ProteinID:
XP_053283933
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All DBs
Position
7:22514603..22544705
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AA seq
677 aa
AA seq
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MPEWFKLLGGSLQRRWRMRGGQRRISTLPDKYFCGISCVVRSEGKLHGNIHVMRVLDEVT
DKMVAREATGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNVQERSVMCHRKKLMTV
PEGIPAETRLLDLSKNRIRTINPDEFVNFANLEHLELSENTISTIEPGAFNNLYGLRTLG
LRSNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHR
AFHGLSSLEHLSLEKCNLSSVPTEAFTHLHSLITLKLRHLNINVIRDYSFKRLYRLKVLE
IANWPYLDTMTPNCLYGLNLTSLTIANANLTTIPYVALRHLVYLRFLNLSYNPIHTIEGN
KLHDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKILNVSGNSLTTLEESAFHSVGNLETLA
LYDNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSR
IRDRKPQQKFVDEGAIVHFACQADGDPSPVIMWLSPQKKFITSKTIGRLSVLPDGTLEVR
YAQIQDNGTYVCIASNAGGNDTSLSHLHIHSYSPDWPHQPNKTFAFISNQPTETGANGTR
ANVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAG
MSSGTVDAPRKFNMKMI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagtggtttaagttgctcggagggtctctgcagagacgctggaggatgcgagga
ggacagagacgcatttcaacactgccagacaaatacttttgtggcatttcctgtgttgtg
cgctcagagggaaaacttcacggaaacatacacgtgatgagagtgttagacgaggtaacc
gataagatggtggccagggaagcgactgggcacagctacctggtggcttgctggcagccc
attctgatcctgatgctgggcactgtgctgtctggctccaccacaggctgtccatcccgc
tgtgagtgcaatgttcaagagcgctctgtgatgtgccaccgcaagaagctcatgacagtt
cctgagggcatccctgcagaaacaagactgctggatctgagcaagaaccgcattagaacc
attaacccagatgagtttgtcaactttgccaacctcgaacacctggagctcagtgaaaac
acgatttccactattgaacccggagcgttcaacaacctttacggcttgcggacattgggg
ctgcgtagcaacaagcttaagctgatccagctcggtgtcttcacaggcctaagcaatctc
acacagctggacataagtgagaacaaaatcgtcatcctgttggactatatgttccaggat
ttgtacaaccttcgatctttagaggtaggtgataacgatctggttttcatctcccaccgg
gcttttcatggcctaagtagccttgagcacttgagtctcgagaagtgcaacttgtcctct
gtgccaacagaggcgtttactcacctccacagtttgatcactctcaagctgcgtcatctc
aatatcaatgtgatacgggattactcctttaaaaggctctatcggctgaaagtgctggaa
atagcaaactggccatacttggataccatgactcctaattgcctgtacggattaaatctc
acctccctgacaattgcaaatgccaacctgaccacaatcccttatgtcgccctgcgccac
ctggtttatttgcgctttcttaatctttcatataatcctatccataccattgaggggaat
aagctccatgatcttctgcgtctgcaggagttccacctggtgggaggcagactggcaatg
attgagccctactcgttccgtggtctgaactacctgaagattctaaatgtgtctggtaac
tctcttaccactttagaggagtctgcttttcattcagtcggcaacctggaaaccctcgcc
ttgtatgataatcccctggcctgtgactgccgactgttatgggttttcaggcgacgctgg
cgactgaacttcaacaggcaacagcccacctgtgcctctcccgagttcgtgcaaggcaaa
gaattcaaggacttcccagatgttctgcagccaaactacttcacatgtcgcaaatcaagg
attagagatcgcaagccccagcagaagtttgttgacgagggagccattgttcattttgct
tgtcaagcagatggagatccttctccagtgataatgtggctatccccacagaaaaagttc
atcaccagcaagacaattggaaggctctccgtgctgccagacggtacccttgaggtgcgc
tatgcccagattcaagacaatggaacatatgtctgtatagctagcaacgcaggcggtaat
gacacctccctttctcacctgcatatccatagctactcgcccgactggccacaccagccc
aataagacgtttgcctttatttccaaccagcccacagaaacaggtgctaatggcacaaga
gccaatgtcccattcccgtttgacataaagacgttgatcattgcgaccacaatgggcttc
atctcttttctcggtgttgtcttgttttgtctggtgctgctcttcctttggagcagagga
aaaggcaacactaaacacaatattgagatcgagtatgtgccacggaaatccgacgctggc
atgagcagcggcacagtggatgctcctcgcaagttcaacatgaaaatgatttaa
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