Pleuronectes platessa (European plaice): 128445462
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Entry
128445462 CDS
T09923
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt02010
ABC transporters
pplt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128445462 (abca1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128445462 (abca1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pplt02000
]
128445462 (abca1b)
Transporters [BR:
pplt02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128445462 (abca1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
128445462
NCBI-ProteinID:
XP_053284118
LinkDB
All DBs
Position
8:29296758..29322345
Genome browser
AA seq
2292 aa
AA seq
DB search
MSVLTQLGLLLWKNFQYRRRQTLQLLVEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWLQGILCNANNPCFRQVTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDQ
NLDGFKELARALRTLQVSRPGFKLKHFLRDNETLSSFLRSNVSFPEDHIQQIRDADVDLE
TVLLRGFGVHLRDMCLRNGGKRSVEDFVTISDPRVSILVQEVICQAPPAWLDLAEDHFLN
NLDFLKPIQRDVRSDPEAVRQVSRATNNLLDSLGSLAVELASMKSWIDLRNEIIFLTQNA
TSSPSTMYQAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNNNSSEDEPTSLYDNSST
PYCNSLVKNMDSNPMSRMIWQALKPLLMGKILYTPHTPATQKVIHEVNRTFQELGVFRDL
GGMWEEMRPKVWSFMESSQHMDLIRTLLKNNVTARLFHAQLDQTDWTVSDVSNFLSKKAE
DPQPAGSALTWREVFNETDQAIMSISRFMECVNLDKLEPVSTEEQLVDQSMLLLEDRRFW
AGIVFPDIDPNATELPPKLNYKIRMDIDNVERTNKIRDAYWDPGPRADPFEDMRYIWGGF
SYLQDVIEQGIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVA
IILKSVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAGLLVLLLKKGNLLPYS
DPGVVFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGF
GAKVFASLLSPVAFGFGCEYFALFEEQGVGIQWNNLFSSPLEEDDFSLRTAILIMYFDSF
LYGVLTWYIEAVFPGQYGIPRPWFFPFIKSYWLGEKDGKSSSVPLSQKGNPGVVCVEEEP
AHLKPGVFIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TSGTAYILGRDIRTELSAIRQSLGVCPQHNVLFSMLTVEEHIWFYSRLKGLSEQQVKGEI
EQILQDTGLHHKRTSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWD
LLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKNQLGTGYYLTLVKK
EPEPSLSSCRNSSSTVSLTKKEEECASVSSSDAGLGSENESEAATIDTGPAASICDVPFV
PPDVSVVSSLILHHVPAARLVEDLGHELTYVLPYNAAKDGAFVELFKNLDVKLAELGISS
YGISDTTLEEIFLKVAEDNGVDTEVPSDGTLPVRRRRRTHAFGGGDHQSCLRPSTEDDSN
DSDVDPESRETDWLSCSEGKGSFQVRGWSLKRQQFVALLWKRFLNARRSRKGFFAQIVLP
AVFVCIALVFSLIVPPFGKYPSLELQPWMYEDQVTFISDDAPRDANMQDLLNALLDAPGF
GTRCMDGHPIQEAPCTMGDEDWHTPEAPESVQQLFSSRNWSMEDPSPACVCSCDGRKKML
PDCPAGAGGLPPPEMKLSATDTLQNLTGRNISDYLVKTYAQIIGKSLKNKVWVNEFRYGG
FSLGARSTQVLPPANEIDDAIERVRKIFELQKGAAADRFLDSLSGFINGLDTKNNVKIWF
NNKGWHSIGAFINVMNNGILRANLPRGHDPSKFGIRAFNHPLNLTKEQLSQVALVTTSVD
VLVSICVIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPLLYWVANFTWDMCNYVVPA
TLVILIFICFQQKAYVSATNLPALALLLLLYGWSITPLMYPASFFFTIPSTAYVVLTSVN
ILIGINGSISTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMSDALER
FGENKLRSPLEWDMVGKNLFAMAVEGAVFFIITVLIQYRFFIKPSSVSKLTKLAPLGDED
EDVARERQKIVHGLGRGDILELRQLTKVFKRKQKPAVDRLCVGIPPGECFGLLGVNGAGK
TTTFKMLTGDTVVTSGEAFLAGKSILREIDEVHQNIGYCPQFDAINELLTGREHLELYAV
LRGVPEEEVCDMADWGIRKLGLLKYADKAAGSYSGGNMRKLSTAVSLIGAPPVVFLDEPT
TGMDPKARRALWNCIHSIIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLK
NRFGDGYTIILRVAGPSPDLLPVMKFIESELSGSTLKEKHRNMLQYQLPSSLTSLAHIFS
ILAKNKETLTIEDYSVTQTTLDQVFVNFAKDQSDDYHSKDSVRRKDVSIEVPTLSSAPGA
AEGCDALRESVM
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcttgacgcaactgggtctgctgctgtggaagaactttcagtacagacgacga
cagacgcttcagctcctggtggagatcgtctggccgctcttcatcttcttcatcctcatc
gctgtgaggctcaactacccgccgtatgaacaacatgagtgtcatttccccaacaaggcg
atgccgtcggccggcacgctgccctggctccagggaatcctctgcaacgccaacaacccg
tgtttcagacaagtgacgccgggcgagtccccgggagtcgtcgggaacttcaacgactcc
ataatttctcgtcttttctccgacgccaagaagattcttctgtacagtcaaaatgaccag
aacctggacgggttcaaggagctcgcccgagctctgcggacgctgcaggtcagccgacca
ggcttcaagctgaaacatttcctgcgagacaacgagactctgtcgagtttcctgcggagt
aacgtctccttccctgaagaccacatccaacagatcagagacgccgacgtggacctggag
acagtcctccttagaggttttggagtccacctgagggacatgtgtctcaggaatgggggc
aagcggagtgtggaggactttgtgacgatctcggaccctcgtgtgtcgatactggtccag
gaagtcatctgtcaggcgccaccagcctggctggacctcgctgaggaccacttcctaaac
aacctggacttcctcaaacccatccagagggacgtgaggtctgaccccgaggccgtcaga
caagtgtcccgggcgaccaacaacctcctggacagtctgggttctctggcggtggagctg
gccagtatgaagagctggatcgatctgaggaacgagatcatcttcctgacacagaacgcc
acgtcctcgcccagcaccatgtaccaggcggtctccaggatcgtgtgtggtcaccctgaa
ggcggcggcctgcagatcaaatccctcaactggtacgaagacagcaactacaaggctctg
tttggaaacaacaacagcagcgaggatgagccaacatcgctgtacgacaactcctccact
ccgtactgtaacagtctggtgaagaacatggactcgaacccgatgtccaggatgatctgg
caggctctgaagccactgctgatgggaaagatcctgtacaccccccacacccccgccacg
cagaaggtcatccacgaggtgaaccggaccttccaggagctgggtgtgttcagggacctt
ggaggaatgtgggaggagatgagacctaaagtctggagcttcatggagagcagtcaacac
atggacctgatcaggactctgctgaagaacaacgtcaccgcaagattattccacgctcaa
ctggaccagactgactggaccgtgtccgacgtgtcaaacttcctgtccaagaaggcggaa
gacccccagccagcaggcagcgccctcacctggagggaggtgttcaacgagacagaccag
gccatcatgagcatctcccgcttcatggagtgtgtgaacctagacaaactggagcccgtc
tccacggaggagcaactggtggaccagtccatgttgctgctggaggacaggaggttctgg
gcaggaatcgttttcccggatatcgaccccaatgccacagagctgccgccaaaactcaac
tacaagatccgcatggacatcgacaacgtggagaggaccaataagatcagagacgcgtac
tgggacccaggtcctcgtgcagacccgtttgaggacatgcggtatatctggggagggttt
tcgtacctgcaggacgttattgagcaaggcatcattcgagcagtgacgggcaccaaggag
aagacgggagtttacatccagcagatgccgtatccctgctacgtcgacgacattttcctg
cgggtgatgagtcgctccatgccactcttcatgacgttggcgtggatgtactcggtggcg
atcattctgaagagtgtggtgtatgagaaggaggcgaggctgaaggagaccatgaggatc
atgggactggataacgggatcctgtggttaagctggttcatcagcagcctgattcctctg
ctgatcagcgccggactgttggtgcttctgctcaagaaggggaacctgctgccctacagc
gaccctggcgtggtcttcctcttccttggatcatttgccgtggtgaccatcatgcagtgt
ttcctcatcagcacggcgttcgcccgagctaacctggcggcggcctgcggaggaatcatc
tacttcaccctgtacctaccctacgtcctgtgtgtagcctggcaggactacatcggcttt
ggagccaaagtctttgctagcctcctgtccccggtggctttcgggtttggctgcgagtac
tttgctctgtttgaggagcagggagtcgggatccagtggaacaacctgttctccagtcct
ctggaggaggacgacttcagcctgcgcaccgcaatcctcatcatgtactttgactccttc
ctctacggagtcctcacctggtacatcgaggccgtgttcccaggtcagtacgggattcct
cggccctggttcttccctttcatcaagtcttactggttgggagaaaaggatggaaagtcc
agcagtgtccctctgagccagaaaggaaacccaggagtggtgtgcgtggaggaggagcct
gctcacctgaagccaggtgtcttcattgagaacctggtgaaggtttatcgtcacggtaag
aaactggcagtggacggactgacgctcggcttctacgagggacaaatcacttccttccta
ggacacaacggagctggaaaaactaccaccatgtccatcctgactggtctgttccctccc
acctctggtacggcctacatcctgggcagagacatccggaccgagctgagcgccatcaga
caaagtcttggagtttgtccgcaacacaacgtcctcttcagcatgctgacggtggaggag
cacatctggttctattcccggctcaaaggcctgtcggagcagcaggtgaaaggtgagatc
gagcagatcctgcaggacaccgggcttcatcataaacgcacctccagaaccagcaccctg
tccggaggcatgcagaggaaactgtctgtggctctggcctttgtcggagggtcgaaggtc
gtgattctggatgaacctacggccggcgtcgacccctatgcccgcagagggatttgggat
ctcctgctgaagtacagacaaggacgcaccatcatcctgtccacgcaccacatggacgag
gccgacatcctgggtgacagaatcgccatcatctcccacgggaagttgtgctgtgtggga
tcgtctctgtacctgaagaaccagctggggaccggctactacctgacgctagtgaagaaa
gaaccagagccatcgctgagctcctgcaggaactcatccagcacagtgtccttaaccaag
aaggaggaggagtgtgcgtccgtcagcagcagtgatgcaggactcggcagcgagaatgaa
agtgaggctgcgaccatcgataccggccccgcggcgtcaatctgtgacgttccctttgtc
ccgcccgatgtgtctgtggtctcgagtctgatcctgcatcatgtccccgccgcccgcctc
gttgaggacctgggacacgagctgacctacgtcctgccgtacaacgccgccaaggacgga
gccttcgtggagctgttcaaaaacctggacgtgaagttggccgaactcggcatctccagc
tacggcatctctgacacgacactggaggagattttcctgaaagtggccgaagataatgga
gttgacaccgaagtgccgtcagacggaacacttcctgttcggaggaggaggaggacacat
gccttcggaggaggagaccaccagagctgcctgagaccatcgacagaggacgacagcaac
gactccgatgtagaccctgagagcagggagacggactggttgagctgttctgaaggtaaa
ggctcgtttcaggtgagggggtggagcctgaagaggcagcagtttgtggctctgttgtgg
aaacggttcctgaacgctcgccgctccaggaagggcttcttcgctcagatcgttcttccc
gccgtcttcgtgtgcatcgctctcgtcttcagtctcatcgtccctccctttggaaaatat
cccagtttggagctgcagccctggatgtatgaggaccaggtcaccttcatcagtgacgat
gctcccagagacgccaacatgcaggacttattaaacgctctgctggacgctccaggcttc
gggactcgctgcatggacggacatcctattcaagaagcaccatgtacgatgggcgacgag
gactggcacacccccgaagcccctgagagcgtccagcagctgttcagctccaggaactgg
agcatggaggatccgtctccagcgtgtgtctgcagctgtgacggcagaaagaagatgctt
cccgactgtcccgcaggagctggaggtctgcccccacctgagatgaagctgagtgccacc
gacaccttgcagaacttgacgggacgaaacatctccgactacctggtgaaaacctacgca
cagatcatcggcaagagcttgaagaacaaagtgtgggtgaacgagttcaggtacggaggc
ttctcattgggtgccaggagcactcaggttctccccccggccaatgagatcgatgacgcc
attgaacgagtcagaaagatctttgagttacagaagggagcggctgccgatcggttcctc
gacagtttgtcaggtttcatcaacggtttggacacaaagaacaacgtcaagatctggttt
aataacaaaggctggcacagcattggagctttcatcaacgtgatgaataacggaatcctg
agagcaaacctgccccgaggtcacgaccccagcaagtttgggatcagggcgtttaaccat
cctctgaacctgaccaaggagcagctgtcgcaggtcgcactggtgacgacctctgtggac
gtcctggtgtccatctgtgtgatctttgccatgtccttcgtcccggccagcttcgtggtc
ttcctcatccaggagagagtcaacaaagctaaacacatgcagttcatcagcggagtgcag
ccgctgctctactgggtggccaacttcacgtgggacatgtgtaactacgttgtaccagcg
acactcgtcatcctcatcttcatctgtttccaacaaaaagcctacgtgtcggccaccaac
ctgccggccctggctctgctgctgcttctctacggctggtcaatcactccgctcatgtac
cccgcctccttcttcttcaccatcccgagcaccgcgtacgtcgtcctcaccagcgtcaac
atcctcatcggcatcaacggcagcatctccaccttcgtcatggagctgtttggaaacaac
gagatcggaggaatcaacgacatcctgaagaacgtcctcctcatcttcccgcacttctgt
ctcggtcgaggactcatcgacatggtgaagaatcaggccatgtccgacgccctggagaga
tttggtgagaacaagttgcgctctcctctcgagtgggacatggtcggaaagaacctcttt
gccatggcggtggagggagcggtcttcttcatcatcaccgtcctgatccagtacaggttc
ttcataaagcccagttccgtcagtaaactcactaaactcgctccacttggcgacgaggac
gaggacgtagcccgagagagacagaagatcgtccacggcctcggacgaggagacatcctg
gagctgcgtcagctcacaaaggtgttcaagaggaaacagaaaccggctgtggatcgactc
tgtgtcgggattccacctggagagtgtttcggtctcctcggtgtgaacggagctgggaag
acgaccacctttaagatgctcacaggagacacggtagtgacgagtggagaggcgttcctg
gctgggaagagtatcctgagggagatcgatgaggtccatcagaacattggttactgtcct
cagtttgacgccatcaacgagctgctgactggaagagaacatctggagctgtacgccgtc
ctgaggggcgtccccgaggaggaagtctgtgatatggcggactgggggatcaggaagttg
ggtcttctgaaatacgctgacaaagcagcaggaagttacagcggaggcaacatgaggaaa
ctgtccacagccgtgtccctgatcggagcgccgcctgtcgtcttcctggacgagcccaca
accggcatggaccccaaagctcgccgggcgctgtggaactgcatccacagcatcatcaag
gagggacgctcggtcgtcctcacctcacacagtatggaggagtgtgaggctctctgtacc
aggatggccatcatggtgaacggcaggttcagatgtctcggcagcgtccaacacctgaag
aacaggttcggtgacggctacaccatcatcctgcgggtggcggggcccagccctgacctg
ctgcctgtcatgaagttcattgagagcgagctgagcggcagcacgctgaaggagaaacat
cgcaacatgctgcagtaccagctgccgtcatcgctcacctcgctcgctcacatcttctcc
atcctcgccaagaacaaagagacgctgacgatcgaggactactccgtcactcagaccacg
ctcgaccaggtgtttgtgaactttgcaaaggaccagagcgacgactatcactccaaagac
tccgtgagacgaaaagacgtttccatcgaggtcccgacgctgagctccgcccccggagca
gcagagggctgcgatgctctgagagagagtgtcatgtga
DBGET
integrated database retrieval system
