Pleuronectes platessa (European plaice): 128445554
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Entry
128445554 CDS
T09923
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04120
Ubiquitin mediated proteolysis
pplt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128445554 (syvn1)
04120 Ubiquitin mediated proteolysis
128445554 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128445554 (syvn1)
Enzymes [BR:
pplt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128445554 (syvn1)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128445554 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
FANCL_C
Motif
Other DBs
NCBI-GeneID:
128445554
NCBI-ProteinID:
XP_053284285
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All DBs
Position
8:complement(9054340..9063226)
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AA seq
635 aa
AA seq
DB search
MVRSALVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISCVFHLRVLSLIGLLGVLDFLFVNHACQSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYVLHTADLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAPAQAPPPAPAAPANAP
AAPPANVAPGMLPGFPPGIFPFWGPFPAGPPPPAAAAATDGPGATDAAQSNQAAGTSQPS
SSTADASTAAAAPGSAMPGFPFSFPPPPFPSAPWLPMPPPPPFVSSMPPPPPSLSRMSEE
ELRELEAEGRQGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPRAGGSTGEASGTN
LSASAAAAGSSTESQSQETDSGPSSDQVNGATVSSQAADSTSAASETESRENIDEELLED
AVEVEGGEPNAAELRRRRLRKLESASSSSSPPPDN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggtacggtcagccttggtgactgccaccagtctggcactgactggggcagtggtggca
cacgcttacctcctcaagcaccagttctacccgactgtggtctacctcaccaaaagcagc
cccagcatggcggtgttgtacatccaggcctttgtgctggtgtttctgctgggaaagttc
atgaggaaggtgttttttggtcagctaagagccgcggaaatggagcacctcattgagcgc
tcctggtacgccgtcactgagacctgtctggccttcactgtgttcagggatgacttctcc
ccccgcttcgtcgccctcttcaccctcctcctcttccttaagtgcttccactggctggcc
gaggaccgggtggactttatggaacgaagtccaaacatctcctgtgtttttcacttgaga
gtattgtctctcattggactgctgggtgtcctggacttcctgtttgtcaaccatgcctgt
caaagcatcattaccagaggagcctcagtccagctggtttttggattcgagtatgccatc
ctgctgactatggtgctgacgaccttcatcaagtacgttctgcacaccgctgacctacag
agtgagaatccctgggacaataaggccgtctatatgctctatactgagctattcacaggt
ttcatcaaagtgctcctgtacatcgccttcatgaccatcatgataaaggttcacaccttc
cctctgtttgccattcgccccatgtatctggccatgaggcaattcaagaaagcggtaaca
gatgctataatgtctcggagagccatccgcaacatgaacacactataccctgatgctact
cctgaagatctgctggcttctgacaatgtttgtatcatctgtcgagaggagatggtcact
ggagccaagaaacttccttgtaatcacattttccactccagctgcttgcgctcctggttc
cagcgccagcagacctgtcccacctgtcgaatggacgtcctcagagcttccaataacaat
cagactcctgccccagcccaggccccgccccctgcccctgcagccccggccaacgcgccc
gcagccccgcctgctaatgtggctccaggcatgttaccaggcttcccacctggcatcttc
cctttctggggtcccttccctgcagggcctcctcctcctgctgccgcggctgcaactgac
ggccctggtgctactgatgctgcccaaagcaaccaggcagctggtaccagtcagccttca
tcatctactgctgacgcctccacagcagcagctgctccaggatcagcaatgccaggcttt
cccttctccttccctcctcctcccttcccctccgcaccgtggctgcccatgccaccacct
cctccctttgtgtcctcaatgccgccgcctcctccgtctctgtcccggatgtccgaggag
gagctccgggagctggaggctgaaggccggcagggcctcgaggccagactccagtgtctc
caaaacatccacaccctgctggacgccgccatgctcaacatccaccactacctcagcacc
gtcgccaccctcactccacctcgggctgggggcagcacaggagaagccagtgggacaaac
ctctctgcttcagctgctgcagctggcagcagcacagagagtcagagccaggagacagac
tcaggacccagctcggatcaggtgaatggtgctacagtctcctctcaggccgctgattcc
acctctgctgcctcggaaacggaaagtagagaaaacattgatgaagagttgctggaggat
gcggtggaggtcgagggcggagaaccgaacgctgccgagctgaggcgccgccgtcttcgt
aagctggagtcggcgtcctcgtcgtcttcacctcctccagacaactga
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