Pleuronectes platessa (European plaice): 128446077
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Entry
128446077 CDS
T09923
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128446077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128446077
03016 Transfer RNA biogenesis [BR:
pplt03016
]
128446077
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
128446077
Transfer RNA biogenesis [BR:
pplt03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
128446077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_4
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
128446077
NCBI-ProteinID:
XP_053285008
LinkDB
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Position
8:complement(16809295..16814618)
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AA seq
480 aa
AA seq
DB search
MDHKETEEREEEEDGEEALFVKNFSSSADEGEGVMELSDRIQAARLSRDPSPPLLLAHSI
SSGWAPEDSSASPASGAEVSQVEEEDREQPVEEWMILGGEEQVGDSSIHLNLGYWSDPED
ESGAEDPNVMSDEDAWAVSVKDKFGADQSRTSRYFYADRNPTCNICNRAGHVAKNCYYQK
KCPTCVLCGIQGHSQRDCPRRPCPSCGLPKHGLRHCEKPPIWKQLCQRCGMRGHLSDFCP
DTWRQYHSTIRSQVPLRPKKIQRLKYKRCFAHCYNCSKRGHHGYECTKNRMVSGTFPSLP
YVCHYDTMEDILQDGNRKHGRTKELGGAGSMQHPSEPTGQPGEENQLVLSRSGVKQETCG
RAGKRKTWPERRRERQEVKKLRREAQARRQGGLLGRSRHHFDDEADPFKSNCHHHRQSTP
PPKWKKKDEAAVKKSRKSRETERWKKRGGMKRGEIYPHGDVDKGSENLLSPKQRVRHRRR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaccataaggaaacagaggagagggaggaggaggaggatggcgaggaggctctgttt
gttaagaacttcagtagttcagctgatgaaggtgaaggagtgatggagttaagtgaccgg
atacaagctgcacggctcagcagggatccctctcctccacttctcctggcccactccatc
tcatctggatgggctccggaggacagcagcgccagtccagcctcaggtgctgaagtgtcc
caggtggaagaggaggacagggagcagcctgttgaggagtggatgatcctgggaggagag
gagcaagtaggagactcaagcattcatctcaacctgggctactggagtgaccctgaggat
gagtctggagctgaagatccaaatgtgatgtcagatgaagatgcttgggcagtatcagtg
aaagacaagtttggtgctgatcagtctcggaccagccgttatttttacgccgatcgtaat
ccgacctgtaacatctgcaacagagcgggacacgttgccaaaaactgctactaccaaaag
aaatgtcccacctgtgtcctttgtgggatccagggccacagccagagggactgtccccgc
cgaccctgccccagttgtgggctgcccaaacatggcctcaggcattgtgaaaagcccccc
atatggaagcagctctgccagcgttgcgggatgagagggcacctctctgatttttgccct
gatacatggcgacaataccactcgacgattcggtcgcaggttcctctcagacccaaaaaa
atccagagactcaaatataagagatgctttgctcattgttacaactgctctaagagggga
catcatggttatgagtgcaccaagaacaggatggtcagtgggacatttccttcactgcct
tatgtttgccactatgacaccatggaggacatactccaggatggtaacagaaagcatgga
agaaccaaagagcttggaggcgctggatccatgcagcacccatctgaaccaacagggcag
ccaggggaggagaatcagctggtcctttcgaggagcggggtaaagcaggagacatgtggc
cgagcaggcaagaggaagacgtggccagagcggcgcagagagagacaggaggtaaagaaa
ctaaggagagaggctcaagccagaagacaaggaggtctactggggaggtctcgtcatcat
tttgatgatgaagcagaccccttcaagtccaactgtcatcatcaccggcagtccacaccg
cctccgaaatggaaaaagaaggatgaggcagctgttaaaaagagccggaagagcagagag
accgagaggtggaagaagagaggagggatgaaacgtggggaaatatatcctcatggtgat
gtcgacaagggaagtgaaaacctgctttctccaaagcaaagagtacgtcacagaagaaga
taa
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