Pleuronectes platessa (European plaice): 128446222
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Entry
128446222 CDS
T09923
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128446222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128446222
03012 Translation factors [BR:
pplt03012
]
128446222
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
128446222
Translation factors [BR:
pplt03012
]
Eukaryotic type
Release factors
128446222
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
128446222
NCBI-ProteinID:
XP_053285193
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Position
8:complement(18371765..18378792)
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AA seq
443 aa
AA seq
DB search
MADDPTAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKGLEMGAVEILIVYENLDTMRYILRVHGAESNGLENAEKTLYLTPEQEKDK
SHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILR
YRVDFQGMEYQGADDVIFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccaccgcggcggacaggaacgtggagatatggaaaatcaagaagctg
atcaaaagtttggaggctgcccgaggtaatggcaccagtatgatctcgcttatcatccct
cctaaggaccagatttccagagtggccaagatgttggctgatgagtttggcaccgcttcc
aacatcaagagcagagtcaacaggctctctgtactcggggccatcacctctgtacagcaa
agactaaagctctacaacaaggtgccccccaatggcttggttgtgtactgtgggaccatt
gtgacagaggaaggcaaggagaagaaagtcaatatcgactttgagccttttaaaccaatc
aacacctccctgtacctctgtgacaacaagttccataccgaggcactgacggccttgctc
tctgatgacagcaagtttggctttattgtgatcgacggtagtggggcgctgtttggaaca
ctacaaggcaacaccagagaggtgctgcacaaattcactgtggacctacccaagaagcac
ggcagaggaggacagtctgctctgcgttttgctcgtctgagaatggagaagaggcacaac
tatgtgagaaaagtggctgagacggctgtccagctcttcgtgtccaacgacaaagtcaat
gtcgcaggaatggtcttggctggctctgccgacttcaagacagaactcagccagtccgac
atgtttgacccaaggttacaagccaaggttctgaagcttgtggacatctcctacggagga
gagaatggttttaaccaggctattgagctctcagcagaggttctctctaatgtcaagttc
atccaggagaagaagctcataggacggtactttgatgagatcagtcaggacacggggaag
tactgttttggtgtggaggacacactcaaaggcctggaaatgggagcagtggaaatcctt
atagtctacgagaacttagacaccatgcgatatattctacgtgtgcacggggctgagagc
aacggattggagaacgctgagaagaccttgtacttaacgccggagcaggagaaagacaag
tctcacttcacagacaaggagacggggcaggaacatgagctgattgagagtatgccacta
ctggagtggttcgctaacaactacaagaaattcggagccacgctggagatagtaacagac
aaaagccaggaagggtcccagttcgtcaagggctttggaggcatcgggggtatcttgcgg
tacagggtggatttccagggcatggagtatcaaggagcggacgatgtgatctttgatttg
gatgactactag
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