Pleuronectes platessa (European plaice): 128446230
Help
Entry
128446230 CDS
T09923
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128446230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pplt03041
]
128446230
Spliceosome [BR:
pplt03041
]
Complex B
Other components
Prp19-related factors
128446230
Complex C
128446230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
RRM_3
zf-CCCH
zf-CCCH_4
RRM_YTH1
zf-CCCH_12
zf-CCCH_PARP12
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
128446230
NCBI-ProteinID:
XP_053285200
LinkDB
All DBs
Position
8:19085252..19090299
Genome browser
AA seq
427 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPKSDVNKEYYTQN
MEREIANTDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVAAKLLTRASTMPRLDPPDDKSISTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAETAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKEGVSEMGTRLDPVPGLPGALPPPPPLDEETPANYFNLDPGTSPAV
LNIALPPPPGINPPPPGFGPPMFHPMAHMAPPMPPPMNMRPPGHIHYPSQDPQRMGAHAA
HGARHGE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccctgggctccaacacctacaacagacagaactgggaagacgcggatttt
ccaattctgtgtcagacatgtttgggagaaaatccttacatccgtatgactaaggagaag
tatgggaaagaatgcaagatttgtgctcgacccttcactgtgttccgatggtgtccgggg
acacggatgcgtttcaagaagacggaggtctgtcagacctgcagcaaaatgaagaatgtt
tgtcagacatgtctgctagacctggaatatggtttgcctatccaggtgcgagacactggg
ctttctgttaaggatgaggttcctaagtcagatgtaaacaaggagtactacactcagaat
atggagagagagatagcaaatactgatggcacacggccggtgggccagttgggcaaggct
cctagttccagtgatatgttgctgaaactggcccgtacgacgccatattacaagaggaac
cggccgcacatctgctccttctgggtgaagggagagtgtaagagaggggaggagtgtccc
tacaggcatgagaagcccacggaccccgacgatcctctggctgaccagaacataaaagac
cgttactacggtatcaatgacccggttgcagccaagctgctgacaagggcctcaaccatg
ccacgactggacccacctgatgacaagtcgatttccaccctctacattgggggtttggga
gatactgtcacggatggagacctcaagagccacttctaccagtttggtgagattcgtacc
attaccatcgtccagcgacagcagtgtgccttcatccagtttgccacacgccagtctgct
gaaacggctgcagagaagtccttcaacaaactgatcattaatggacgaaggctcactgtc
aaatggggaaggtctcaggcagctagaggaaaggagggtatcaaagaaggtgtcagcgag
atgggcaccagacttgatcctgtacctggtctgcctggagctcttcctccaccaccacca
ttggatgaagaaactcctgccaattacttcaacctggacccaggcacttctcctgctgtc
ctgaacatagctctgcccccaccaccaggaatcaacccacctcccccaggttttgggcct
ccaatgtttcaccccatggctcacatggctccacctatgccccctccaatgaacatgaga
cctcctggtcatattcactacccctcccaggatcctcagcgcatgggtgcccatgcagca
catggcgcacgccatggagagtag
DBGET
integrated database retrieval system
