KEGG   Pleuronectes platessa (European plaice): 128446253
Entry
128446253         CDS       T09923                                 
Symbol
pcdh18b
Name
(RefSeq) protocadherin-18b isoform X1
  KO
K16499  protocadherin delta 2
Organism
pplt  Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:pplt04515]
    128446253 (pcdh18b)
Cell adhesion molecules [BR:pplt04515]
 Cadherins
  Protocadherins
   128446253 (pcdh18b)
SSDB
Motif
Pfam: Cadherin Cadherin_2 PAG Cadherin_C_2 TMEM154
Other DBs
NCBI-GeneID: 128446253
NCBI-ProteinID: XP_053285224
LinkDB
Position
8:3022901..3033476
AA seq 1243 aa
MCAQKMGAKMIQAKGNIFSPALLHLLLLVALTHGAAGKTLKYKVYEEQKVGTVIARLRED
VAGVLSKLPSSLTFRFRAMQRGSTPFLTVREEDGEISIGTKIDREKLCEKNLNCSIEFDV
VTLPTEYLQLFHVEVEVLDINDNSPHFSRSIVPVEISESAAVGTRIPLDGAVDADVGENA
LHTYSLTPNNFFKIDVRTRTDGAKYAELVVMRELDREVLSSYQLQLTASDNGVPPKSGST
LVKISISDSNDNSPVFDEQAYIINLLENSPLGTLIIDLNATDPDEGTNGKIVYSFSSHIP
PKILETFKINPENGHITLIKKVDYESTASFELDVQAQDMGPNSIPGLCKIVVKVVDVNDN
KPEININLMTPGKEEVAYISEGAPVDTFIALVRVDDSDAGLNGEVVCRLHGHGHFRLQKT
YEKNYMILTNISLDREKRSEYSLTVIAEDRGSPSLSTIKHFTVQVLDENDNPPRFEKSHY
EVFKSENNSPGAYLMTVVASDPDLGTNGQVTYTIIDALVQGSPISTYVTIDPSNGAIYAL
RSFDHEDVSRIAFTIQARDGGNPALSTNTTVLLTVLDENDNPPIIHSPSLQNHTAELLVW
KYASPGQLITALKVTDRDAGANGELSCAIVGGNEDMLFVMDARRCELRTNASLEQAPRDV
MELKVEVQDRGTSRLSTGALFRLSLQETMDILPPLYPTGTSQASLDLSLIVIISLGAVCA
LLLIVMVMFATTRCTREKKDPRHNYNCRVAENSYQNHPKKPARQIHKADITLVPTVNGTL
PVRAHPRSPSASPAPERGTLGSRQSHHSRQSLNSLVTISSNHVPENFALELAHATPPVEQ
VSQLLSMLHQGQYQPRPSFRGNKYTRSYRYALNEMDKFSLKDSGRGDSEAGDSDYEPGRE
SPMDRLLGEGFTEIYAPDGQHRTHAAMRHCTEECRVLGHSDQCWMPPLASPASSSSDYRS
NLYIPGEEARHVTDLSQEKTPQPCTDNVTARNQSFSTFGKDLGGENGGEEEGGEDSSGDR
DEDLCGTTSLLSEMSSVFQRLLPQGLDSYVQVNEKEKGTSLSGVGVPMTGSLDRRRGHLP
GKPSPSVHQQGVAAWAANTHFQNPGSSIGPSGHHQGGSYHTLKPNTKLGSQSSSHKGSQA
PKNSPQNTGHPCKPHSSPLLTALVSPTLMQHSPAPVQVQVPLPGPSCKWLPAMEEIPENY
EEDDFDSVLNHLQGKRCDSRHELVDASELVAEINKLLQDVRQS
NT seq 3732 nt   +upstreamnt  +downstreamnt
atgtgcgcgcagaagatgggtgcaaaaatgattcaagcaaaaggaaatattttctctcct
gcactactccatctactgcttttggtcgcccttacgcacggagccgctggtaagactttg
aaatataaagtttacgaggagcagaaagtaggcacggttattgcacggttaagggaagat
gtagccggggttttatccaaactaccgagttcgttgacctttcggttccgcgctatgcaa
cgagggagcacgccgttcttgactgttcgggaggaggacggagagatcagcatcggcacc
aaaatcgaccgcgagaagctttgtgagaaaaacttgaactgctcgattgaattcgatgtg
gtcacgctcccgacggagtacctgcagctgttccatgtggaagtggaagtgctggacatt
aacgacaactccccgcacttctcccgctccattgtcccagtcgagatttccgaaagcgca
gccgtggggacgcggatcccgttagacggcgcagtggatgcagatgtcggagaaaacgct
ttgcacacctactcactgacacccaataacttctttaagattgatgtgagaaccaggacg
gacggggccaagtacgcagagttggtggtgatgagggagctggaccgggaggtgctgtcc
agctaccagctccagctcacagcctcggataacggtgtaccccccaaatccggctccact
ttggtcaaaatcagcatttctgactccaacgacaacagcccagtcttcgatgagcaggct
tacatcatcaatttgctggaaaactctccccttgggactctaatcattgatttaaacgcc
acagacccagatgagggcactaatgggaaaatagtctactctttcagcagtcacattcca
ccaaagatcctggaaacatttaagataaaccccgaaaatggccacattactcttattaaa
aaagtggactatgaaagcactgcttcctttgagctagatgtgcaggctcaggacatggga
cctaactccatccctggactttgcaaaattgtggtgaaagtggtggatgtaaatgacaac
aaaccagagattaacatcaacctgatgacacctggtaaagaggaggtggcctacatttca
gagggggcccctgtggacaccttcatagctctggtgcgtgttgacgacagtgatgcaggc
ctcaatggggaggttgtttgcaggctgcacggtcatggccacttcagactccagaagacc
tacgagaagaattatatgatcctcactaacatctcgttggacagggagaagaggtcagag
tacagcctgactgtcatagctgaggacaggggctctcctagtctctcaaccatcaaacat
tttactgttcaggtgttggatgaaaatgacaatcctccacgtttcgagaagagccactat
gaggtcttcaaatcagagaacaactcaccaggagcatatctgatgaccgtggtggcatca
gatccagatctgggcaccaatggccaggtcacctacaccatcatagatgctctggtccaa
gggagccctatctccacctatgtcaccattgatccctccaatggcgccatctatgcccta
cgcagctttgaccatgaagacgtcagccgaatcgccttcaccattcaggcacgcgatggg
ggaaaccctgcactgtccacgaacaccaccgtccttctaactgttttggatgaaaatgac
aacccccccatcatccactccccctccctccagaatcacacggctgagcttctggtctgg
aagtatgcatccccgggtcagctgataactgcgcttaaagtcacagaccgtgatgctggt
gccaatggagagctgagctgcgccattgttggtggcaatgaggatatgctgtttgtgatg
gatgcccggcgatgtgagctcagaaccaatgccagcctggaacaggctcctcgggatgtg
atggagctgaaggtagaagtgcaagacaggggcaccagtcggctgtccacaggcgccctc
ttcaggctctccctgcaggagaccatggacatcctcccacctctctaccccactggcacc
agccaagcctcactggatctctctctcatagtcatcatctctctaggtgctgtttgtgct
ctactgctcattgtcatggtgatgtttgccaccacccgctgcaccagagagaagaaagac
ccaagacataactataactgccgtgtggcagaaaacagctaccagaaccaccccaagaag
cctgccaggcagatccacaaagcagacatcaccctggtcccaactgtcaatgggactctg
cctgtccgggcacacccacgctccccgtcagcctctccagcacctgagaggggcaccctg
ggtagcagacagagccatcatagccgccagtccctcaacagcctggtcaccatctcctcc
aaccatgttccagagaattttgccctggagctggcccatgccacacctcctgtagagcaa
gtctcacagcttctgtccatgctccatcagggtcagtaccagccacgaccaagcttcaga
ggcaacaaatacaccaggagctacagatatgctttgaatgagatggataagttcagtctg
aaggacagcggtcgtggagacagtgaggccggggacagcgactatgagccaggcagggag
tcacccatggaccggctccttggtgagggctttactgagatatatgcccctgatggccag
cacagaacgcatgcagctatgaggcactgcacagaggagtgtcgtgttcttggtcactca
gatcagtgctggatgccccccttggcctcaccagcctcatcatcctccgactaccggagc
aacctctatatcccaggagaagaagcccgccatgtaactgacctctcgcaggaaaagacc
ccacagccctgcacagacaatgtgactgcccggaaccagagcttttccactttcggcaag
gacctgggcggtgagaatggtggagaggaggaggggggagaggacagcagtggggacaga
gatgaagacctgtgtgggaccacgtcactgttgtcagagatgagcagcgtgttccagagg
ttgctaccccagggtctggactcctatgtccaggtcaacgagaaagagaaagggacaagt
ctgagtggtgtgggtgtgcctatgactgggtctttggatcgcaggaggggccatctgcct
ggcaagcccagcccctctgttcaccagcaaggcgtggcagcctgggctgccaatacccac
ttccagaacccgggaagcagcatcggtccatctggccatcaccagggtggcagctaccac
actctgaaacccaacaccaagctcggctcccagagcagcagccacaagggctcacaggca
cccaaaaacagtcctcagaacaccggccacccctgtaaaccccacagtagccctctgctc
acagcactggtcagtcccactctgatgcagcattccccagcccctgtgcaagtacaagtg
ccgctccctgggccctcctgcaagtggttgcctgcaatggaggagataccagagaattac
gaggaggacgattttgactctgtgctcaaccaccttcagggcaaacgctgcgacagcaga
catgagctggtggatgccagcgagctggtggctgaaatcaacaaacttttgcaggatgta
cggcagagctag

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