Pleuronectes platessa (European plaice): 128446253
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Entry
128446253 CDS
T09923
Symbol
pcdh18b
Name
(RefSeq) protocadherin-18b isoform X1
KO
K16499
protocadherin delta 2
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pplt04515
]
128446253 (pcdh18b)
Cell adhesion molecules [BR:
pplt04515
]
Cadherins
Protocadherins
128446253 (pcdh18b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PAG
Cadherin_C_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
128446253
NCBI-ProteinID:
XP_053285224
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Position
8:3022901..3033476
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AA seq
1243 aa
AA seq
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MCAQKMGAKMIQAKGNIFSPALLHLLLLVALTHGAAGKTLKYKVYEEQKVGTVIARLRED
VAGVLSKLPSSLTFRFRAMQRGSTPFLTVREEDGEISIGTKIDREKLCEKNLNCSIEFDV
VTLPTEYLQLFHVEVEVLDINDNSPHFSRSIVPVEISESAAVGTRIPLDGAVDADVGENA
LHTYSLTPNNFFKIDVRTRTDGAKYAELVVMRELDREVLSSYQLQLTASDNGVPPKSGST
LVKISISDSNDNSPVFDEQAYIINLLENSPLGTLIIDLNATDPDEGTNGKIVYSFSSHIP
PKILETFKINPENGHITLIKKVDYESTASFELDVQAQDMGPNSIPGLCKIVVKVVDVNDN
KPEININLMTPGKEEVAYISEGAPVDTFIALVRVDDSDAGLNGEVVCRLHGHGHFRLQKT
YEKNYMILTNISLDREKRSEYSLTVIAEDRGSPSLSTIKHFTVQVLDENDNPPRFEKSHY
EVFKSENNSPGAYLMTVVASDPDLGTNGQVTYTIIDALVQGSPISTYVTIDPSNGAIYAL
RSFDHEDVSRIAFTIQARDGGNPALSTNTTVLLTVLDENDNPPIIHSPSLQNHTAELLVW
KYASPGQLITALKVTDRDAGANGELSCAIVGGNEDMLFVMDARRCELRTNASLEQAPRDV
MELKVEVQDRGTSRLSTGALFRLSLQETMDILPPLYPTGTSQASLDLSLIVIISLGAVCA
LLLIVMVMFATTRCTREKKDPRHNYNCRVAENSYQNHPKKPARQIHKADITLVPTVNGTL
PVRAHPRSPSASPAPERGTLGSRQSHHSRQSLNSLVTISSNHVPENFALELAHATPPVEQ
VSQLLSMLHQGQYQPRPSFRGNKYTRSYRYALNEMDKFSLKDSGRGDSEAGDSDYEPGRE
SPMDRLLGEGFTEIYAPDGQHRTHAAMRHCTEECRVLGHSDQCWMPPLASPASSSSDYRS
NLYIPGEEARHVTDLSQEKTPQPCTDNVTARNQSFSTFGKDLGGENGGEEEGGEDSSGDR
DEDLCGTTSLLSEMSSVFQRLLPQGLDSYVQVNEKEKGTSLSGVGVPMTGSLDRRRGHLP
GKPSPSVHQQGVAAWAANTHFQNPGSSIGPSGHHQGGSYHTLKPNTKLGSQSSSHKGSQA
PKNSPQNTGHPCKPHSSPLLTALVSPTLMQHSPAPVQVQVPLPGPSCKWLPAMEEIPENY
EEDDFDSVLNHLQGKRCDSRHELVDASELVAEINKLLQDVRQS
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcgcagaagatgggtgcaaaaatgattcaagcaaaaggaaatattttctctcct
gcactactccatctactgcttttggtcgcccttacgcacggagccgctggtaagactttg
aaatataaagtttacgaggagcagaaagtaggcacggttattgcacggttaagggaagat
gtagccggggttttatccaaactaccgagttcgttgacctttcggttccgcgctatgcaa
cgagggagcacgccgttcttgactgttcgggaggaggacggagagatcagcatcggcacc
aaaatcgaccgcgagaagctttgtgagaaaaacttgaactgctcgattgaattcgatgtg
gtcacgctcccgacggagtacctgcagctgttccatgtggaagtggaagtgctggacatt
aacgacaactccccgcacttctcccgctccattgtcccagtcgagatttccgaaagcgca
gccgtggggacgcggatcccgttagacggcgcagtggatgcagatgtcggagaaaacgct
ttgcacacctactcactgacacccaataacttctttaagattgatgtgagaaccaggacg
gacggggccaagtacgcagagttggtggtgatgagggagctggaccgggaggtgctgtcc
agctaccagctccagctcacagcctcggataacggtgtaccccccaaatccggctccact
ttggtcaaaatcagcatttctgactccaacgacaacagcccagtcttcgatgagcaggct
tacatcatcaatttgctggaaaactctccccttgggactctaatcattgatttaaacgcc
acagacccagatgagggcactaatgggaaaatagtctactctttcagcagtcacattcca
ccaaagatcctggaaacatttaagataaaccccgaaaatggccacattactcttattaaa
aaagtggactatgaaagcactgcttcctttgagctagatgtgcaggctcaggacatggga
cctaactccatccctggactttgcaaaattgtggtgaaagtggtggatgtaaatgacaac
aaaccagagattaacatcaacctgatgacacctggtaaagaggaggtggcctacatttca
gagggggcccctgtggacaccttcatagctctggtgcgtgttgacgacagtgatgcaggc
ctcaatggggaggttgtttgcaggctgcacggtcatggccacttcagactccagaagacc
tacgagaagaattatatgatcctcactaacatctcgttggacagggagaagaggtcagag
tacagcctgactgtcatagctgaggacaggggctctcctagtctctcaaccatcaaacat
tttactgttcaggtgttggatgaaaatgacaatcctccacgtttcgagaagagccactat
gaggtcttcaaatcagagaacaactcaccaggagcatatctgatgaccgtggtggcatca
gatccagatctgggcaccaatggccaggtcacctacaccatcatagatgctctggtccaa
gggagccctatctccacctatgtcaccattgatccctccaatggcgccatctatgcccta
cgcagctttgaccatgaagacgtcagccgaatcgccttcaccattcaggcacgcgatggg
ggaaaccctgcactgtccacgaacaccaccgtccttctaactgttttggatgaaaatgac
aacccccccatcatccactccccctccctccagaatcacacggctgagcttctggtctgg
aagtatgcatccccgggtcagctgataactgcgcttaaagtcacagaccgtgatgctggt
gccaatggagagctgagctgcgccattgttggtggcaatgaggatatgctgtttgtgatg
gatgcccggcgatgtgagctcagaaccaatgccagcctggaacaggctcctcgggatgtg
atggagctgaaggtagaagtgcaagacaggggcaccagtcggctgtccacaggcgccctc
ttcaggctctccctgcaggagaccatggacatcctcccacctctctaccccactggcacc
agccaagcctcactggatctctctctcatagtcatcatctctctaggtgctgtttgtgct
ctactgctcattgtcatggtgatgtttgccaccacccgctgcaccagagagaagaaagac
ccaagacataactataactgccgtgtggcagaaaacagctaccagaaccaccccaagaag
cctgccaggcagatccacaaagcagacatcaccctggtcccaactgtcaatgggactctg
cctgtccgggcacacccacgctccccgtcagcctctccagcacctgagaggggcaccctg
ggtagcagacagagccatcatagccgccagtccctcaacagcctggtcaccatctcctcc
aaccatgttccagagaattttgccctggagctggcccatgccacacctcctgtagagcaa
gtctcacagcttctgtccatgctccatcagggtcagtaccagccacgaccaagcttcaga
ggcaacaaatacaccaggagctacagatatgctttgaatgagatggataagttcagtctg
aaggacagcggtcgtggagacagtgaggccggggacagcgactatgagccaggcagggag
tcacccatggaccggctccttggtgagggctttactgagatatatgcccctgatggccag
cacagaacgcatgcagctatgaggcactgcacagaggagtgtcgtgttcttggtcactca
gatcagtgctggatgccccccttggcctcaccagcctcatcatcctccgactaccggagc
aacctctatatcccaggagaagaagcccgccatgtaactgacctctcgcaggaaaagacc
ccacagccctgcacagacaatgtgactgcccggaaccagagcttttccactttcggcaag
gacctgggcggtgagaatggtggagaggaggaggggggagaggacagcagtggggacaga
gatgaagacctgtgtgggaccacgtcactgttgtcagagatgagcagcgtgttccagagg
ttgctaccccagggtctggactcctatgtccaggtcaacgagaaagagaaagggacaagt
ctgagtggtgtgggtgtgcctatgactgggtctttggatcgcaggaggggccatctgcct
ggcaagcccagcccctctgttcaccagcaaggcgtggcagcctgggctgccaatacccac
ttccagaacccgggaagcagcatcggtccatctggccatcaccagggtggcagctaccac
actctgaaacccaacaccaagctcggctcccagagcagcagccacaagggctcacaggca
cccaaaaacagtcctcagaacaccggccacccctgtaaaccccacagtagccctctgctc
acagcactggtcagtcccactctgatgcagcattccccagcccctgtgcaagtacaagtg
ccgctccctgggccctcctgcaagtggttgcctgcaatggaggagataccagagaattac
gaggaggacgattttgactctgtgctcaaccaccttcagggcaaacgctgcgacagcaga
catgagctggtggatgccagcgagctggtggctgaaatcaacaaacttttgcaggatgta
cggcagagctag
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