Pleuronectes platessa (European plaice): 128446484
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Entry
128446484 CDS
T09923
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128446484 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128446484 (cstf2)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
128446484 (cstf2)
U7-dependent histone pre-mRNA processing factors
128446484 (cstf2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
128446484
NCBI-ProteinID:
XP_053285529
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All DBs
Position
8:complement(20940761..20949928)
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AA seq
491 aa
AA seq
DB search
MANVAAAAAAAAAAAIAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRL
VYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSMCLG
TGTPIIESPYGDHVQTEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQN
PQLSYALLQAQVVMRIVDPEIALKMLHRQTQVQSLAPSAQSGGGPPINPPPIQPSMPVSQ
PQPLPGMHVNGAPQMMQPPNMGAVAGPIPGPGPGPGTGPVGPPGPGGIPPRGLLGDGPND
PRGGTLLSVTGEVIEPNRGYMAAPPQHQAPPVHMSPMASGPPPDMRGPPMDMRGPPMGEP
RNMIGDPRGPPMMEQRGPPMETRGRDPRAMDTRGPVAAQRVPMAGPMQGPPSHSMGPNAP
PPARPGSGAPPSGGGFSPGQTQVSTQDQEKAALIMQVLQLTPEQIAMLPPEQRQSILILK
EQIQKTAGGAP
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtcgccgctgcagctgccgccgccgcagccgccgctatcgccgccaacaga
gatccagccgtcgaccggtcgttacggtccgtgttcgtggggaacatcccgtatgaagcc
acagaggagcagctcaaagacatattttctgaagtgggactcgttgtgagcttcaggtta
gtatatgacagggagacaggcaagccgaagggatatggcttctgtgaatatcaggaccag
gagacggccctcagtgccatgcggaacctgaacgggagagagttcagcggtcgagctctc
cgtgttgacaatgcagccagtgagaaaaacaaggaggagctcaaaagtatgtgtttgggg
acaggaacccctattattgagtcgccttatggagaccatgtgcagacagaggaggccccg
gagtccatcagcagagccgtggccagtctgcctccagagcagatgtttgaactcatgaaa
cagatgaagctgtgtgtgcagaacagtccccaggaggcgaggaacatgctgctgcagaac
cctcagctgtcttacgctctgctgcaggcccaggtggtcatgcggatcgtcgaccctgag
atagccttgaaaatgctccaccgtcaaacccaagtccagtctctggctcccagcgcacag
agtggaggagggccgccgatcaatccacctcctatacaacccagcatgccagtgtctcag
ccccagcctctgcctggaatgcatgttaatggagcccctcagatgatgcagccccccaac
atgggtgctgtcgcaggaccaattcctggaccgggtccgggacctggaacaggaccagtc
ggacctccaggaccaggtgggatcccccccagaggcctgctgggggatggtcctaatgac
cccagagggggaactctgctgtctgtcactggagaggtcatagaacccaaccgcggctac
atggctgctccaccacaacaccaagccccacctgtacacatgtccccgatggcaagtggc
ccccctccagatatgagaggacccccgatggacatgaggggcccacctatgggtgaaccc
cggaacatgattggtgacccaagagggcccccgatgatggagcaacggggacctccgatg
gaaaccagaggtcgcgacccgagggcgatggatactcgtgggccagttgctgcgcagagg
gttcccatggcagggccaatgcaaggccccccctctcacagcatgggtcctaacgctcct
ccacctgcaagaccgggttctggtgctcctccatcgggcggcggcttcagtccgggtcag
actcaggtctccacacaggaccaggagaaggccgccctgatcatgcaggtactgcagctg
acccctgaacagatcgccatgttgcccccagagcagcggcagagcattctcatcctcaaa
gagcagattcagaagactgcggggggtgcaccgtga
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