Pleuronectes platessa (European plaice): 128447602
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Entry
128447602 CDS
T09923
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128447602 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pplt03021
]
128447602 (smarcc2)
03036 Chromosome and associated proteins [BR:
pplt03036
]
128447602 (smarcc2)
Transcription machinery [BR:
pplt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128447602 (smarcc2)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128447602 (smarcc2)
PBAF complex
128447602 (smarcc2)
GBAF(ncBAF) complex
128447602 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
128447602
NCBI-ProteinID:
XP_053285783
LinkDB
All DBs
Position
2:complement(15888065..15900137)
Genome browser
AA seq
1052 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLTRPVIYLSADIEPKLLGKLKDIIKRHQGSVTEDKASSSHVVVP
IPTSLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEVEAAVEDAPSPEKPRKVHAK
WILDLDQYNEWMTEEDYEVGEGCPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPS
PSPTPPPQESSKKKNTKKGPTTPYTKSKRGQREEEQEDLSKDLDEASPVPASEEGNAAKT
NNTKKDSDSTPVKGGTDMDEQEDESMETTGKEEEEGSPGVKGEPVKGSDLHEDNVTEQTH
HIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLT
STACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLV
PLQPKTTQTPATQPPMMSFPDKVKEKPADLQNFGLRTDMYSKKSGSVKIKSTASSMRDWT
EQETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSSTLGPLAFQ
PVPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEA
ARVSGRQDPLYGLEGSGIAGTGLEEGERPEENTDENKNDTQSSEEKREPKDSKDGAIEEE
EKQAENGKKEEERGREPEGEREADKTESDMGDGEKEKEGKEGTEEGQREGESEIERKAKV
ERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEEL
ETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQQSQAGGPHSSQ
PASGVQPQAIAASQQAPSTPAPQPAASPAPPTSSAPAAESQPPQGAHTSPPCPPSQAPAS
HSSSSTTPVLHEPTAPLSGETLQPAAPVPPPQ
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgacacc
gtctctcagtttgataatgtccgcgtctggctggggaagaattacaaaaagtacatccag
gccgagccccccaccaacaagtccctgtccagcctggtggtccagctgctccagttccag
gaggaggtgtttgggcgacatgtcagcaaccctccactcaccaaactgcctatgaaatgt
ttcctggacttcaagtcagggggggctctctgccacattctggcagctgcctacaagttc
aagagtgaccaaggatggcgcaggtttgacttccagaatccgtcaaggatggaccgaaat
gtggagatgttcatgaccattgagaagtcgttggtgcagaacaactgcctgactcgacct
gtcatctacctgagtgcggacatagagccaaaactgctcgggaaacttaaagacatcatc
aaaagacatcagggctcggtgactgaggacaaggcctccagctcccatgttgttgtgcct
attccgaccagtctggaggaagaggagtgggtgcgtcccgtgatgaagagagataaacaa
gtgctgcttcactggggatattttcctgacagttacgacacctggatcccagccagtgag
gtcgaggctgcggtggaggatgctccgagcccagagaaacctaggaaggtccatgccaag
tggattttagacctggaccagtataacgagtggatgactgaagaagactatgaagtgggc
gagggctgccccaagaggaagaggatctcggccaagaccctgacggatgaggtgactaca
cccgacgagcggcgggacaagaagcccggcagtgccaagaagaggaagcgttcgccatcg
ccctcccccacccctccacctcaggagagcagcaagaagaagaacactaagaagggacca
acgaccccttacaccaagtctaaacgtggccagagggaggaagaacaggaggacttgagt
aaggacttggatgaagcatcgcctgttccagcatctgaagagggaaacgcagctaagaca
aataacactaagaaagattcagattcaactccagtcaagggaggaacggatatggacgag
caggaggatgagtccatggaaacaacagggaaggaagaggaggaaggctccccgggtgtc
aagggagaaccggtaaaaggctctgaccttcatgaggacaacgtgactgagcaaacccac
cacatcatcatcccgagctacgctgcctggtttgactacaacagtgttcacgccatcgag
cgcagagccctgccagagtttttcaatggaaaaaacaaatccaaaacccctgagatttat
ctggcgtacaggaacttcatgatcgacacctatcgactaaatcctcaggagtacctcacc
tccaccgcctgccgcaggaacttggcaggagatgtttgtgcaatcatgagagttcacgcc
ttcctggagcaatggggtctgatcaactaccaggtggactcagagagccggcccacaccc
atgggtcctccgcccacctctcacttccatgtcctggcagacactccatccagtctggtt
cccctgcagcctaagaccacccagactcctgctacccagccgccaatgatgtcgttccca
gataaagtgaaagaaaaaccagcagatctgcaaaactttgggctacggactgacatgtac
agcaagaagagtggctcagtaaagatcaagagtacagcaagctccatgagggactggaca
gagcaagaaacactactactacttgagggtttggaaatgtacaaggacgactggaacaaa
gtgtcagaacacgtgggcagccgtacacaggatgagtgtatcctgcacttcctgcggctg
cccatcgaagacccctacttggaggacagctcctcgactctgggaccactcgccttccag
ccggtgcctttcagccaggcaggaaaccctgtcatgagcacagtggccttcctcgcctcg
gtcgttgacccacgcgtggcctcggctgcagctaaatctgctctggaggagttttctcgt
atgaaagaggaagttcctgcagcgctggtcgaggctcacgtgcgacgagtggaggaggca
gcgagagtcagtggtcgccaggaccccctgtatggtctggaagggagtgggattgcagga
actggcctggaggagggagaaagacctgaagaaaacactgatgaaaacaagaacgacacc
caatcaagtgaagagaagagagagcccaaggacagcaaagatggagcgattgaagaagag
gaaaaacaggcagaaaatgggaagaaggaagaagagagaggaagagaacctgaaggagag
agggaggcagacaaaacagaatcagatatgggtgatggagagaaggagaaagagggaaaa
gagggaacagaggaaggacaaagagaaggagagagtgagatagagaggaaggccaaggta
gagcgtgatgttggagaggggaacctggccactgcggctgcatctgctctcgctgcagct
gctgttaaagccaagcacctggctgcagtggaagagaggaagatcaagtctctcgtggct
ttgttggtggaaactcagatgaagaagctggagataaaactgcgacactttgaagaactg
gaaaccatcatggacagagagagggaggctctggagtaccagcggcagcagctcctcgcc
gaccgtcagtctttccacatggagcagttgaaatacgctgagatgagagctcgccagcag
cacttccagcagattcagcaccagcagcaaagccaggccgggggccctcattccagccag
ccggcctcaggcgtgcagcctcaggccatagcagccagtcagcaagctcccagcacacca
gcaccgcagccagccgccagccctgcacctccaacgtcttctgccccagctgcagagtcc
caaccgcctcagggtgctcacacctcgcccccatgtcccccaagccaggccccggcttcc
cactccagctccagcactacacctgtacttcatgagcccaccgcccccctctccggggaa
acactccagcctgcagctccagtccctccaccacagtga
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integrated database retrieval system
