Pleuronectes platessa (European plaice): 128447683
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Entry
128447683 CDS
T09923
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03030
DNA replication
pplt03410
Base excision repair
pplt03420
Nucleotide excision repair
pplt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128447683 (rfc4)
03410 Base excision repair
128447683 (rfc4)
03420 Nucleotide excision repair
128447683 (rfc4)
03430 Mismatch repair
128447683 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pplt03032
]
128447683 (rfc4)
03036 Chromosome and associated proteins [BR:
pplt03036
]
128447683 (rfc4)
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128447683 (rfc4)
DNA replication proteins [BR:
pplt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128447683 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
128447683 (rfc4)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
128447683 (rfc4)
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128447683 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
128447683 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_11
Gp44_lid
AAA_30
DUF815
AAA_5
AAA_19
RuvB_N
Mg_chelatase
SLFN-g3_helicase
AAA_24
AAA_14
ResIII
Cdc6_lid
ABC_tran
AAA_3
DNAX_ATPase_lid
Kinesin
AAA_28
Motif
Other DBs
NCBI-GeneID:
128447683
NCBI-ProteinID:
XP_053285929
LinkDB
All DBs
Position
9:complement(2555685..2569409)
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGATVQTTRPQKDKAAGLSTEKKAKAIPWVEKYRPKSVDEVAYQDEVVAVLKKSL
EGADLPNLLFYGPPGTGKTSTILAAARELYGPVLYRQRVLELNASDERGIQVVREKVKNF
AQLTVAGTRQDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKQSRTTRFCLICNYISRI
IEPLTSRCSKFRFKPLANQIQEERLLAICDKENLKYTKQSIAALVRVSEGDLRKAITFLQ
SAARLGVDKEITEKAITDIAGVVPPKMIDNLLQICFKGTFEKLEIAVRDMVDEGYAATTI
LSQLHESIIEQDLNDKQKSAITEKMAVVSKCLSDGADEYLQMLSLCSVIMQQSSQNN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttttgaaaggagccactgttcaaactaccagaccccagaaagacaaggca
gcggggctcagtacagagaagaaagccaaggctattccttgggtagaaaaatacaggcct
aagtctgttgatgaggtggcctatcaggacgaggtggtggcagtgcttaagaaatctctg
gaaggagctgatcttcccaacttactgttctatggtcctcctggaacaggaaagacctcc
accatcttagctgctgccagggaactatatggtcctgtgctatacagacagagggtgttg
gagctcaatgcctcagatgagcgaggcatccaggttgtcagagaaaaggttaagaacttc
gctcagctcactgtggctgggactcgccaagacgggaagccatgtcctccttttaaaata
atcatcctggacgaagcagactccatgacagcaccagctcaggccgctctcagacgaacc
atggagaagcaatcgcgcaccacccgcttctgtctcatctgtaactacatcagcaggatt
attgagcctttgacatccagatgttccaagtttcgcttcaaacctttagccaatcagata
caagaagaacgcctgctagctatctgtgacaaggagaacctcaagtacactaaacagagt
atagcagcattggtgagggtgtctgagggagacctgcggaaagccatcaccttcctccag
agcgctgcacgcctcggcgtcgacaaagagatcacagagaaggctattactgacatagcc
ggggttgttcctccaaagatgattgacaacttgctccagatttgcttcaaaggaacattt
gagaaactagagattgccgtcagggacatggtggatgaaggctatgcagccacaacgatt
ctgagtcagctccatgagtcgatcatagaacaggacctgaacgacaagcagaagtcggca
atcacagagaagatggcggttgtgagtaagtgcctgtcggatggtgcagatgagtacctg
cagatgttgagtctctgttcagtcatcatgcagcagtcctcccagaacaactaa
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integrated database retrieval system
