Pleuronectes platessa (European plaice): 128447832
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Entry
128447832 CDS
T09923
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128447832 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pplt03310
]
128447832 (rorca)
Transcription factors [BR:
pplt03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128447832 (rorca)
Nuclear receptors [BR:
pplt03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
128447832 (rorca)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128447832
NCBI-ProteinID:
XP_053286179
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Position
9:12493289..12507079
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AA seq
474 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLVDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQECAGLAAREDNGDMAD
LTCPYRRGSSTALSDLDDITTLQGDLLFDLPLTPRDAGGDYCNLDMLGGSAGSSSSSQSS
PEQTNFDFVDCNLGIKHEYQLLQDSGLFSHAILNPLPGGFSLLEIERITQSVVKSHIETS
QYSTEELKRMAWTLYNPEETRSYQTKSAEVMWQQCAIHITNAIQYVVEFAKRISGFMDLC
QNDQIILLKAGCMDVLLIRMCRAYNPINNTLLFDGKFATPQFFKALGCDDLVNAVFDFAK
SLSRIQMSEEDMALFSAAVLLSPDRPWLTDVQKIQKLQDKVYVALQRCLQKEGASEEKLA
KMVSRLPIMKSICNLHIDKLQFFRLVHPETAYTFPPLYREVFGSEITFPDSTEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagagcccaaatagaggtcattccctgcaaaatctgtggggacaaatcatcagggatt
cactatggtgtcatcacctgtgaaggctgcaagggcttcttccgacggagccagcagaac
aatgctatgtactcctgctcacgtcagagaaactgtctcgttgaccggaccaaccgtaac
cgctgccagcactgcaggttgcagaagtgtcttgctctggggatgagccgtgatgctgtg
aagttcggtcgaatgtcaaaaaaacagcgtgacagcctgtatgcagaggtccagaagcac
cagcagtcccaggagtgtgcgggcctcgccgcccgcgaggacaatggcgacatggccgac
ctcacctgcccctacaggagaggctcaagcactgcgctcagtgatctggacgacatcacc
acgctgcaaggagacctacttttcgacctgccgctgaccccgagggacgcaggtggtgac
tactgtaacctggacatgctgggtggaagcgcaggcagcagttcatcctctcagagttca
ccagaacagaccaactttgactttgtagactgcaacctcggcatcaagcatgagtaccag
cttttgcaggactctggactcttctcacacgctatcctcaacccgctgccggggggcttc
tccctgcttgaaattgagcgtataactcagagtgtggtcaagtcccatatcgagacaagc
cagtacagcacagaggagctgaagagaatggcgtggaccttgtataacccagaagagaca
cgctcatatcagaccaagtcagctgaggtgatgtggcaacaatgtgccattcacatcacc
aacgcaatccagtacgtcgtggagtttgccaagcgcatctctggcttcatggacctgtgt
cagaacgatcagattatcctcctcaaagcaggctgcatggatgttcttctgatccgcatg
tgtcgggcctacaaccccatcaataacacactgctcttcgatggaaagtttgctactcct
cagtttttcaaagctctcggctgtgatgacctcgtgaacgcagtgtttgactttgccaaa
agcctgagccgcattcagatgtccgaggaggacatggctctcttcagtgctgctgtgctg
ctctcaccagaccggccctggctcacagatgtccaaaagatacagaagttgcaggacaaa
gtctacgtggctctgcagcgctgtctacaaaaagagggggcatcagaagagaaactagca
aagatggtgtccaggctcccaataatgaagtcgatttgcaacctccacatcgacaaactg
cagtttttccgcctggtgcacccggagacagcgtacacgtttcctcctctgtacagggag
gtgtttggcagtgaaatcacctttccagactccacggagggttag
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