Pleuronectes platessa (European plaice): 128447992
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Entry
128447992 CDS
T09923
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128447992 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128447992 (tprb)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128447992 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
OVT1
Motif
Other DBs
NCBI-GeneID:
128447992
NCBI-ProteinID:
XP_053286449
LinkDB
All DBs
Position
9:complement(21849009..21869581)
Genome browser
AA seq
2358 aa
AA seq
DB search
MAALLLQELGDSEISKIPKAVQNKLERILSDQQYEIDSLKAQQEQFRVDNEQHFFEKVKQ
LAQCQEEFRAQTQEHLKLKDVSTKLEEDLKTVREKNSEYESVQERLSSEQTLLSKAKEEL
EAEKRDLVRTLERRSLEVEHVNDDLRQLNDKLVEVSTSKMSLQMKLDELEAAEVNIKYKE
KRMEQEKELLHGQTSWLNEELKAKSEELLSLSREKGNKILDLKCSLENKEDELNRLQDQM
ASLKTSNENLQRQSEDMISKLKDAKEQQANVEEKFRNELNANIKLSNLYKGAAADAEAKS
EELNLAVEELHKLLKDAGEANKVLEEKLQESNGATDKAVAELNERIQSLEKELDNANDLL
SSSKLRGPLGTSSMLTEEQMTTMSPTAATVSKIKPGVKLTELYTAYVESQEQLQLERLEN
KRVNKYLDDIVQEVEAKGPILKRQRDEHERMQKSVASLSAKLEQAIKEVHRLQREADEAN
KHSSVLERDNQRFERQLSDMGQQVRVLLIELEEARGNHVVLEEDVSSADISSTSEVISQH
LVTFRGVEELQKQNQRLLVALRELSDAQEKEEFEATVGRHGELEQSLGKAQVELESLKEQ
RSQHNKMTESIVRQRDMYRVLLAQATGVSFPQQDAPADEFSLTSTPRRSPAATPTTGTPT
ALVSMASESTEALEAKAALRQLQEVFTSYKRERLESDKASTVQSEKFQEQLSDLRSQNTK
ISTQLEFASKRYEMLQDNVEGFRKEIASLREKEQKMNAAKQKQEQTIHTLNEDLRAAKEK
LSMAEGCAEGLRRERDKLKLEESRMIQEKETIQSQQQSQTMLLTNLQSIQATLERSETTT
RQRLDTQLEKQEREISQLQKRLENEVEQRHMLTRNQEIQLMETKRQVETQVALYQKTKEL
LSAAELELSSLRLQQGSSEAHHPLSCPSTPTTRGLQVSDQDREHLQGRLRLAESRVEELA
ESLKAVTSSMEQYRAMAQSLEESLDKEKKVTEQARSSIEAHMKEAEIRHRKIEEKLLEAE
KEKQGLEEQKKIALASLEEQINNLRKGLSNAQASQQAALQRVALAEAQQQKAVQDSQEHA
KLAAEAQDKYEREMMLHAADVEVLQTAKAQARQAVELKHQLEEKVQRVGTELLEARISWE
EQEKILKEEMTKIESRFEELQRQNVLLHEQIQAMSSKMAESLQRAASESTMNISMSEEGK
SQDQVLEILRFVRREKEIAESRYEVAQGETLRHRLRVEHLERELKEMQDSLCAARDRMQV
TAKSLAQHDELMNKTETMSILMETNKMLRGEKEKMEQELQQTQAKLQKLESDLLPMQQAN
SELSEKSGMLQAEKKILEEEIKRWKARTQHLVSQQKDSDPEEYKRLHSEKETHLKRIQQL
SEETNRLKADVARSSNLTTTLQGQITNLRDSMGKLTEERNLLKKDVDTKNQEIQEKVRTI
TQVKKIGRRYKTQYDELKVDHDKMVAEAAAGPSQEEEARQASAQELQSLRDSLNQAEAKI
KELEGQLENINKVVTEREAEVRNTQEQSSRLQTELTRLRQDLQDKTSQEDTLRQQMTNKE
EKTRKALVYARQRINQLTGSKDSLQKENDELKQQREELEVRVSALKSQYDGRLSRQEREL
RDLRGQQERQEQRDEPAEAGPSKTQEQQRSTEQRQISLKTTPAADRGSASTSETPTANIK
PTPVVATAGKQPVNPGNKPTPRASIRPMITPATVPTPTPTATVMPTSQVETQEAIQSTEG
PPVEHVTVYGSASGSVRSASPNVQTSLASPMLTVQQTQTQTQTTAFVQPTQQQSVSHAEP
ANQEPPTLVIEATPSSQVEWPSTSSTSSMFGTVSGTSSMSKRPREEEESSSMVPETEAPP
EDTSRAPIPKKLRIIQRVGPEEEVLAEDSAEAESVVPTDSQDSVEATQAEEFQALEEGED
SAASQSVTLDQEMTLTQSDAPDQPSQEVIVIITDTESEEEQEEEEEEEDEQECDEEEDEE
DEEEEEEEEEDEEEDEGGMGEEGEESNEGSGDGNEAYEEDDTEGADITDPGTETEESLGA
SDSTQRPADSQTPSWMEMFSGVPAPQSPRRPTHQLQTRPNIHPAPSSELGPPAQRLPARR
QSVGRVPQLTPGPPQHFFDDDDRMVPSTPTLVVPHRDGFDQAVHSPQVAGVPRFRFGPSD
DMPQTSSSSHSDLGQLASQGGLGLYESPLFLTTHEEESGGRSVPTTPLQVTAPVTIFSEA
AQSDSSEHASQSVPMVSTSTPGPVVPGAAGTGEERDDVFLEPDTDRPSAEASSDQVVSQG
DMEEQSQPSDRAGLPSTSQEPSSSSADTSSAASRPSRPGTSRQLQRWPESRGRMKRGGNT
FKSQSFPSRGTNGRRFAR
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgttgctgcaggagttaggcgactcggagatctctaaaatacccaaagcg
gttcagaacaaactggagaggattctgtcggaccagcagtatgagatcgactccctgaag
gcgcagcaggagcagtttcgtgtggataacgagcaacacttctttgaaaaggtgaaacag
ctggcccagtgtcaggaggagtttcgggcccagactcaagaacatcttaaacttaaagat
gtgtcgactaagcttgaggaggatctcaaaacggtgcgtgagaagaacagtgaatatgag
tctgtccaagagaggctgtcgtctgagcagactctgctgtcaaaagccaaagaggaactc
gaggcagaaaagcgagatcttgtacgaactctggaaaggagatctttggaagtggagcat
gtaaatgatgacttgaggcagctcaatgataagctggtggaagtcagcacctctaagatg
tccttgcagatgaagctagatgagctcgaagctgccgaagtcaacattaaatataaggaa
aagcgaatggaacaagagaaggagcttctgcatggtcagacatcttggctgaatgaggag
ttgaaggcaaagagtgaggagcttctctctctctccagagagaagggaaacaagatcctg
gatttgaaatgctccctggagaataaagaagacgagttgaaccgactccaagaccaaatg
gctagtttgaagacttcaaatgaaaatcttcagagacagagcgaggacatgatcagcaaa
ctgaaagacgccaaggaacaacaagccaacgtggaggaaaagttcagaaatgagttgaat
gccaacattaagctctccaatttatataagggtgcagctgctgatgctgaggcaaaaagt
gaagagttgaatctggctgtggaggagctgcataaactgttaaaggatgctggagaagcc
aacaaggtccttgaggagaagttacaggagagtaatggtgccacagacaaggctgtcgct
gaactaaatgagaggatccagagtctagagaaagagctggataatgccaatgatctgctg
tcgagctctaaacttagaggcccactcggaacatcatctatgctgacagaagagcaaatg
acaacaatgtctccaacagctgctactgtgtccaagatcaaacctggtgtgaagctcact
gagttgtatactgcctatgtggagagccaggagcagctgcagttggagcgcctggagaac
aaacgagtcaacaagtacctggatgacatagttcaggaagtggaggccaaagggcccatt
cttaaacggcaacgggatgagcacgagcgcatgcagaagtcggtggccagtctgtctgcc
aagctggagcaggccatcaaggaggtgcaccgcctgcagagggaggctgatgaggccaac
aagcattcctcagtcttagaacgggacaaccagagatttgaacggcagctgtctgatatg
ggtcagcaggtacgtgtgctgctcatcgagcttgaagaggctcgtggaaaccatgttgtt
ctcgaggaggatgtgagctcagccgacatcagcagcacatcagaggtgatcagccaacat
ctggtgaccttccgcggtgtggaggagcttcagaagcaaaaccaacgtctcctggtcgcc
ctcagggagctcagtgatgcccaagagaaagaggagtttgaggccactgtcggcagacat
ggggagctggagcagagtttggggaaggctcaggtggagctggagtccctgaaggagcag
cgcagtcagcataacaaaatgactgagtccatcgtgaggcagagggacatgtaccgtgtg
ctgctggctcaggccactggagtgagctttcctcagcaagatgcaccagccgatgagttc
tccctgacctccacgcctcgacgctcacctgcagccactcccaccacaggaacgcccact
gctcttgtctccatggcatcagagtctactgaggctctggaggccaaggctgccctgcga
cagttgcaggaggtgtttacctcttataaaagggagcgtttggagagtgacaaggcgtcg
actgtgcagagcgagaagttccaagagcagctctctgacctccgctcccagaataccaaa
atatcaacccagttggagtttgcctccaaaaggtatgagatgctccaggacaatgttgag
ggcttcaggaaggagattgcctccctaagagagaaagaacagaagatgaatgctgctaaa
cagaagcaggagcagactatccacactttgaatgaggatctgagagctgccaaagagaaa
ctctccatggcggagggctgcgccgagggcctgcgtagggagagagacaagctgaagttg
gaggagtccagaatgatacaggagaaggaaacaatccagagtcaacaacagagccagact
atgctgctgaccaacctccagtctatccaggctactcttgagcgttcagagaccaccaca
cgccagcgtcttgacacccagttggagaagcaggaacgggagatctcccaactacagaag
cggctggagaacgaggtggagcagcgccacatgctcaccaggaaccaagaaatccagtta
atggagacaaagaggcaagtggagacgcaggttgctctataccagaagaccaaagagctg
ctgagtgctgctgagttggagctcagctccctccggctgcagcaaggcagcagcgaagca
caccatcccctgagttgcccctccacacccaccaccagaggcctgcaggtatcagatcaa
gacagagagcaccttcagggccgtctgaggttggctgagagccgcgtagaggagctggca
gagagcctgaaggcagtaacctccagcatggagcagtacagagccatggctcagagcctg
gaggagtccctggataaagagaagaaggtaacagagcaggcacgctcatcaattgaagcc
catatgaaggaggctgagattcggcaccgaaagattgaggagaagcttcttgaagcagag
aaagagaagcaaggcctagaagagcagaagaagatcgctctggcttcactggaggagcag
ataaacaatctaaggaaaggtttaagcaacgctcaggcatctcaacaggcggcacttcag
cgagtagcactggctgaagctcagcagcagaaggcggttcaggacagccaggagcatgct
aagctggcagcagaagcacaggataagtatgagcgggagatgatgctgcatgcagcagat
gtggaggttctgcagactgcaaaggctcaggcgcggcaggccgtcgagctcaaacaccag
ttggaagagaaagtgcagagggtcggcactgagctcctggaggccagaatctcctgggag
gagcaggaaaagatcctcaaggaggaaatgacaaagattgagagtcgctttgaggagttg
cagagacagaatgttctcctgcatgagcagatccaggcaatgagcagcaagatggctgaa
agcttgcagcgtgctgccagcgagagtactatgaacatttccatgagtgaagagggcaaa
tctcaagaccaagtgcttgagattctcaggtttgtgcgtcgggagaaggagatagcagag
tcccgttatgaggttgcccaaggtgagactctgcgtcatcggctgagggtggagcacctg
gaacgagagctgaaggagatgcaggacagcttgtgtgctgcaagggacaggatgcaggtg
actgcaaagagtctggctcagcacgacgagctgatgaacaagacagaaacgatgagcatc
ctgatggagaccaacaagatgctgagaggggaaaaggaaaagatggagcaggagctgcag
caaacccaagctaagttgcagaagctggagtcagacctcctgccaatgcagcaggccaac
tctgagctgagtgagaagagtggcatgctgcaggcggagaagaagatcctagaggaggag
atcaagcgctggaaagctcgaacgcagcatttggtgagtcaacagaaagattccgaccca
gaggagtacaagcgtctgcactctgagaaggagacgcatctcaaacgcatccagcagctc
tctgaggagactaacagacttaaagcagatgtggccaggagcagtaacttgacaactacc
ctacaaggccagataacgaacttgcgtgacagtatgggtaagctaaccgaagagcgcaat
ttgctgaagaaggacgtggataccaagaaccaggaaatccaggagaaggttcgaactatc
acgcaggtcaagaagatcgggcgacgctacaagactcaatatgatgaactcaaggtggat
catgacaagatggtggcagaggccgcagcaggtccctcccaagaagaagaggctcgtcag
gcgtccgctcaggaactccagagcctcagagattctctaaaccaggctgaagccaagatc
aaagagctggaaggacagctggagaacataaacaaggtggtcacagagcgtgaggctgaa
gtgcgtaacacccaggagcagtcgtccaggctgcagacagagctgaccaggctgaggcag
gatttgcaggataagacttcacaggaggacacgctgaggcagcagatgaccaacaaagag
gagaagacccgaaaggccctggtttatgccagacagaggatcaaccagctcactggctcc
aaagactcgctgcagaaggaaaatgatgagctaaagcagcagcgtgaggagctggaggtt
cgagtgagcgctctcaagtcccaatacgatggccgcctgagtcggcaggagagagaactg
agagacctgcgaggtcaacaggagcgacaagagcaaagagatgagccagctgaggcaggt
cctagcaagacccaggagcagcagaggagcacagaacagaggcagatcagtctgaagacg
actccagctgcagacaggggcagtgccagcacctcagaaactccaactgccaacattaag
ccaacgcctgtagtcgcaacagccggaaagcagccggtgaatccggggaacaaacccact
ccaagagcaagcattaggccgatgatcactccagcgactgttcccacacctacacccaca
gctacagtcatgcccacctctcaggtggagacccaggaagccatccagtctactgaaggc
ccaccagtggagcatgtgaccgtgtacggcagcgccagtggctctgtgcgctcggccagc
cccaatgtccagacgtctctagccagccccatgttgaccgttcagcagacacagacacag
actcagacgacagcgtttgttcaaccaacacagcaacagagcgtgagccatgcagagcca
gccaatcaggagccaccaaccctggtcattgaggccacacccagttcacaggtggaatgg
ccttcgacttcctccacctcatctatgtttggaactgtttcaggaacttcctccatgtcc
aagaggcctcgagaggaggaggagagcagcagcatggtccctgaaacagaagcccccccg
gaggacacctccagggctcctatacccaagaagctacgcatcatccagagagtgggtcca
gaggaggaggtgctggctgaggacagtgctgaggctgagagcgtcgtgccaacagacagt
caagacagtgtggaggcaactcaggcggaggagtttcaagcactggaggaaggagaggac
agcgcagcctcccagtccgtgactttggaccaagagatgaccctgacgcaaagtgacgcc
cccgaccaaccgtcacaggaagttatcgtcataataacagacaccgagagtgaagaggag
caggaagaggaggaggaggaggaagacgagcaggaatgcgatgaggaggaagatgaggaa
gatgaagaggaggaggaagaagaggaagaggatgaagaggaagatgagggagggatgggg
gaggaaggagaggaaagcaatgagggcagcggagatggcaacgaggcctatgaagaagat
gacacggagggagctgacatcacagacccgggcacggagactgaggagagtttgggggcg
tctgactccacccagagaccagcggattcccagacacccagctggatggagatgttttct
ggtgtacccgcgccccagtcgccacggaggccaacgcatcagcttcaaacccgcccgaac
atccaccctgccccatcgtctgaactgggaccacctgctcagcgcctgcctgctcggcgt
cagtcagtgggccgagtccctcagctcactcccgggccgccgcagcacttcttcgacgac
gacgacaggatggttcccagcactcccactctggtggtgccgcaccgcgacgggttcgac
caggccgtccattctccgcaggtggccggtgtgcctcgctttcggttcggcccttcagac
gacatgccccagaccagctcgtcttcacactctgatctgggacaactggcatcacaagga
ggtctaggtctatatgaaagccccttgttcctcacaactcatgaagaagagtctggtgga
cgcagtgttcctaccaccccactgcaagttacagccccagtaaccatcttctccgaggcg
gcccagtctgacagcagtgagcacgcctcccagtcggttcccatggtgagcacgtccaca
ccaggcccggtggtgccaggagcagccggcacaggggaggagagggatgatgtcttcctg
gagcctgacactgataggcccagtgctgaagcgtcgtcggatcaggtcgtgtctcaggga
gacatggaggagcagagtcagccgtctgacagggccggcctcccctccaccagccaggag
ccctcctccagctccgcagatacaagcagcgctgcgtctagaccctcccgacctggaacc
agcagacagctgcagcgctggccggagagccgcggccggatgaagagaggaggtaacacc
ttcaaaagtcagtcgtttccttctcggggaacaaacggcagacgattcgccagatga
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integrated database retrieval system
