Pleuronectes platessa (European plaice): 128448029
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Entry
128448029 CDS
T09923
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128448029 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pplt03009
]
128448029 (rexo1)
Ribosome biogenesis [BR:
pplt03009
]
Eukaryotic type
Pre-60S particles
RNases
128448029 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
ChaC
Motif
Other DBs
NCBI-GeneID:
128448029
NCBI-ProteinID:
XP_053286526
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Position
9:complement(21613527..21624659)
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AA seq
1265 aa
AA seq
DB search
MLRSTGFFRGIDCPFYAESGDAGGGRNGCSRAYCHFRHSQQRRPSYGAPPADVKKHRESL
SSQKEQGYDPFNPEVVRPPPEQQNGKPAGSGDFSGALEQVKRAIEEARSEVEWEKRKLSR
MGDEPYNPSGSTSLSSSRATKSKAAASHMAYDPGSYQITSVGYNPAPSCSKYTLDSDTQG
KNSNSMEYVPTLKKPPTRTKTYKLPSPPSSPKYSISAVASKCKYTLDDSKPSTDMEYDPL
SNYTAGIAAKSKRAEARAVKTQGSKTHKLPVRDLSDEECVVAVKKTQQPSVDMSKYTFSD
SEDESSGTEYRPTSLKNLQQRKGHTGTPGVAFAKEKKERTESVINALTQRNKEDSAQDSD
VQVDIKRKGNPEKKNLVSQISHEKSGKSEKIHKLDKEAKKTLSSKSGSSSRNDKGSIKHS
NQESAKKENKSLGKKDDSKNTITDKTSDKIQREGRDKKRIDGKIKAVEKGQTDSSKRHID
TENDSRERKKPKTLDKEKEPVRNKDPKHRNGKLDTSKREKDVKKMNKSSSHGGSSSSHSK
GSSASSNKTKHNVSSSNGKRPESKRKSLSHADLFGDESPEEADPMEVDDDSDDDDDGEEV
LVRKSADAVKRACLNKRKASERTPSSSDDEGDVEGGSAGRDEVEHLDIDFSGFHDEFFDS
DPMEECLRIFNESKDVRKEDKGRQTKQPSRDSEEEKGTETTLIPGQKKRVSHCAATSEAS
NSGVRPYKRASAQEVCYQRMQLAQHQAAQLSASVKAASRSSSSIFPGERKRIAHRPGPPT
SSSKTSSADSKPAVSRVLSPTQTHQTVKAQTTAGILSKTMSTVTGKRMAHTPTMKSSSMK
RPIIPTEFGAKVPTNVRQRYLNIFIDECVKFCPSEDAAFQMGLDEEKQVYDRSSSKSIYL
NIAVNTLKKLRGKCTSRPTPVPKYPGGFAHRKALSHEELLGGRLAATTSFTVNRMGKQQE
EKLTGVTLYRKLKAYMMTEEQLQEHGYPRFNPDAPGKALVYNVPEKKAITDPLNKICCRC
GAEYRINVNGNCVRKEECSFHWGRLRKHKGSGGWETNYNCCAGAVGAPGCQVCKQHVQDG
RKESLDGYMSTFSKSLPPDGNGGVFALDCEMCYTKQGLELTRVTVVDAEMKVIYDTFVKP
ITKVVDYNTRFSGVTQEDLESTTITLRDVQAVLLSMFSAESILIGHSLESDLFALKLIHS
SVVDTAIVFPHRLGLPYKRALRNLMAEHLKRIIQDNVEGHDSSEDATACLELMIWRIKED
AKGKR
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgttacgctccaccggcttcttccgagggatcgactgcccgttttacgccgagtccggc
gacgctggcggcggcaggaatgggtgtagcagagcctactgtcacttcaggcacagccag
cagcggcggccgtcctacggagctccgccggcggatgtgaagaagcacagggagtcgctc
tcctcccagaaagaacaaggttatgatcccttcaacccagaagtggtgcggccccccccg
gagcagcagaatgggaagccggctgggtcgggggacttcagcggggccctggagcaggtc
aagagggcaattgaggaggcgcgcagtgaggtggagtgggagaagaggaagctctctcga
atgggggacgaaccctacaatcccagtgggagtaccagtttgtcttcatctcgtgccacg
aaaagtaaagctgcagcttcgcacatggcctacgatcctgggagttatcagatcacatca
gttggttataatcccgcccccagctgcagcaagtacaccttggattccgacacccagggg
aaaaacagtaactctatggaatatgttcctaccttgaaaaagcctccaactcggacaaaa
acgtacaaactcccctctcccccttccagcccaaagtattcaatcagcgcagtcgcctca
aagtgtaaatacactctggacgattcaaaaccttctacagacatggagtatgacccactc
tccaactacacggcaggaattgcagcgaaaagcaagagggcagaggcccgggctgttaag
actcaagggagcaagacacacaagttacctgtgcgggatttatcagatgaggagtgcgtt
gtagctgtgaaaaaaacccagcagccgagcgtagacatgtccaaatacactttttctgac
tctgaggatgagagctctggaacggagtatcgacccacctctcttaagaatctccagcag
agaaaaggccacactggaacgcctggtgtcgcttttgcgaaggagaaaaaagagagaact
gaaagtgtaataaatgcactgacacaaaggaataaagaggactcggcacaggactcggac
gtccaggtagacattaagcgaaagggcaatccagagaagaagaatctggttagtcaaatt
agtcatgagaaaagtggcaaatctgagaagatccataaattagataaagaggcaaagaaa
acattaagtagtaaaagcggtagcagcagccgtaacgacaaaggttcaataaaacactca
aaccaggagtctgcaaaaaaagagaacaagagtctagggaagaaagatgatagtaaaaac
acgataacggataagaccagtgataaaattcagagggagggaagagacaagaagagaatc
gatggtaaaatcaaagctgtggaaaaaggtcaaacagactcaagcaaacgacacatagac
acagaaaatgattcgagggaaagaaagaaacccaaaacattagacaaggaaaaggaaccc
gtaagaaataaggaccccaaacatagaaatggtaaacttgacacgagtaaaagagaaaag
gatgtgaagaaaatgaacaaaagcagttctcacggtgggagcagtagcagtcacagtaag
ggaagttctgcaagcagcaataagacgaagcacaacgtcagctcgtcaaacgggaaaaga
cctgagagcaagcggaagagtctgagccacgcagatctgtttggagacgagagtccagaa
gaggctgatccgatggaggtggacgacgacagcgacgacgacgatgatggagaggaagtt
ttggtgagaaagtcagctgatgctgtaaagagggcgtgtctaaacaagaggaaagcgtcc
gagcggactccgtcttcctctgacgatgagggtgacgtggagggaggcagcgcaggtcgg
gacgaggtggagcatctcgatatcgacttctccgggttccatgacgagttctttgactca
gatcccatggaggagtgtttgcggatcttcaacgaatccaaggatgtaaggaaggaagac
aagggcaggcaaactaaacagccctccagggattcagaggaggagaaaggcacagagacg
actctcatccccggtcagaagaagagagtctcacattgtgctgccacaagtgaagcatct
aattctggtgtacgaccgtacaagagagcctcggcccaggaggtctgctaccagcgcatg
cagctggcccagcatcaagctgctcagctctctgcctcagtcaaagctgcctcacggagc
tccagctccatcttccccggagagaggaagaggatagcacaccgtcccggcccaccgacc
tcatcctccaaaacaagttctgcagattctaaaccagctgtcagtcgagtgttgtccccc
acccagacgcatcagactgtcaaggctcaaaccacagccggtattctgtccaagactatg
tccactgtgacggggaagaggatggcgcacactcccaccatgaagagttcctcgatgaag
cggcccataatccccactgaatttggggccaaggttcctaccaacgtccgtcagcgctac
ctcaacatattcatagatgaatgtgtaaaattctgcccatcagaggacgccgccttccag
atgggcctcgacgaggagaagcaggtgtatgaccgcagtagcagtaagagcatctatctc
aatatagctgtcaacaccttgaagaagctccgcggcaagtgcacctcccgtccaacacct
gtccccaagtacccgggggggttcgctcacaggaaggccctgtcccatgaggaactcctc
gggggtcggttggctgctacaaccagcttcactgtcaacaggatgggtaaacagcaggag
gagaaactcacaggagtcactctgtacaggaaactgaaggcgtacatgatgacagaggag
cagctgcaggagcacggatacccaagatttaacccagatgctcctggcaaggccttagta
tacaacgttccagagaaaaaggccatcacagatcccttgaacaagatatgctgtcgatgt
ggagcagagtatcggatcaatgtcaatggcaactgtgtacggaaagaggaatgcagtttt
cactggggacgtctacggaaacacaaaggctctggaggctgggagaccaactacaactgc
tgtgctggtgcagtgggcgctccaggttgtcaagtgtgcaagcaacatgttcaggacggg
cgtaaagagtcgttggacggctacatgtccacgttcagtaaatctctaccaccagatggc
aacggaggggtgtttgctttggactgtgagatgtgctacacaaaacaaggcctggaactg
acgagggtgacggtcgttgacgctgagatgaaagttatctacgacaccttcgtcaaacct
ataaccaaagtggtggattacaacacacgattttcaggggtgactcaggaggacctggag
agcaccaccatcaccctgagagatgttcaggccgtgctgctcagcatgttcagcgctgaa
tccattctcatcggacacagtctggagagcgacctgttcgccctgaagctaatccacagt
tcagtggtagacacggccatcgtgttccctcaccgcctcggcttaccctacaaacgtgcc
ttgagaaacctgatggctgaacacctcaaacgcatcatccaggacaacgtggagggccat
gactcgagcgaagatgccaccgcctgcctggagctgatgatatggaggatcaaggaggat
gcaaagggcaaaagatga
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