KEGG   Pleuronectes platessa (European plaice): 128448198
Entry
128448198         CDS       T09923                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pplt  Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pplt03036]
    128448198 (kdm4b)
Enzymes [BR:pplt01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     128448198 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     128448198 (kdm4b)
Chromosome and associated proteins [BR:pplt03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    128448198 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD DUF4537 DUF7141 53-BP1_Tudor Tudor_5 Tudor_3
Other DBs
NCBI-GeneID: 128448198
NCBI-ProteinID: XP_053286742
LinkDB
Position
9:complement(20062714..20103211)
AA seq 1230 aa
MATDMPMDTVPASSPDPTSPPVLSSSATQDQIPTQVPAIAENPPTEVSSVPDAAPDHSSA
QPADPEMAQGLVSDSELPPAPLLLPLPPVSAKNPGCKIMTFRPTMEEFKDFAKYVVYMES
QGAHRAGLAKVIPPEGWKPRRSYDSIEDMVIPAPIMQVVTGQSGLFTQYNIQKKSMTVGE
YRKLANSKKYCTPRHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDEDIREWNIGHLNTL
LDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQSKSWYAIPPEHG
KRLERLAQGFFPGSSQGCDAFLRHKMTLLSPSILKKYSIPFDRITQNEGEFMITFPYGYH
AGFNHGFNCAESTNFATLRWVDYGKMATQCTCRKDMVKISMDVFVRSLQPDRYELWKQGK
DSMVLDHLKATELNSPELERWREHRVTFRENLLRRAMQKMKLFRRLKLDEVKVLAQEGIE
LNAAEYQRQVEERDAKRKQEREERLAREAMMTLEAMEREEQKAAEAAAAEAALAAETPAI
EAEAHEAKPQNLTEDGEKKKQKRLKKIPNIQNAITGFEAVFEQFATGGTRTSDNAIVGEL
EAGKPLTSQQSDITADNKLDACYPKMKIPTGVKKSRRHPLSKPPMLSPLSIVKQELTSDK
DLSSPGPLDSDMKKQEHLWQNNEPNFLAEKSFNAAVAPLKPYCAVCSLFCPYNSPHKDVS
SEPPITPTPRPGSMTRPLVPEMCFSVGSGNTEPPPTNHHIGEDGTSVLLCCSSCKMQVHA
SCYGVKPESVSDSWTCSRCAAGAWTVNCCLCNLRGGAFKKTVDNCWVHIICAIAVAEARF
VNAIEREPVDISAVPETRKNLKCVFCHGKNSSPNRGACIQCSNENCATSFHVTCAQIAGV
VMKPADWPYVVSVTCHRHTKVPTKSRSATRAPPCPNVGQRVIGRNADGWYYHCTIIGTAT
QTFYEVNFDDGSYCDNVHPENLLSHDCLRNGLPEIGELIVVCTSEGQVLNAYFIKQHVHK
LYQVEFQDQTQLMLKHSEIHQLDLELPKRVRARLAINAPQEEAPSADEAQAAKRRCLPPG
PAQPTETPTNIITPPSCPLLAALVDAPAATRESISTPQTSQPLSPLGMYQLESPVPTSSI
HVDAETPMDTSVLFREALRESSLASDPTLTPQSTPFRSTLNSDPLLSAPSPPPPPQHMSD
SYTPSSSYVSYMETLLNSHFPQDDGSGPLY
NT seq 3693 nt   +upstreamnt  +downstreamnt
atggctaccgacatgccaatggacacggtgcctgcctcatccccagacccgacctcaccc
cctgttctcagctccagtgcaacccaagaccagattcccacccaggtgccagccatagct
gagaaccctcccacagaagtgtcttcagttcccgatgcggctccagatcatagctcagct
cagcctgcagacccagagatggcccaaggacttgtttctgactcggagctgcccccagcc
cctctgctgctaccactgccaccagtcagtgccaagaaccccggctgcaagatcatgacc
ttccggcccaccatggaggagttcaaagacttcgccaaatacgttgtgtacatggagagc
caaggagctcaccgtgccggcctggcaaaggtgattcccccagagggctggaagccgcgg
agatcctacgacagcatcgaggacatggtgattccagctcccatcatgcaggtggtgact
ggtcagtcgggtctgttcacccaatacaacatccagaagaagtctatgaccgtgggagag
taccgcaagctggccaacagcaagaagtactgcacacctcgccacaaagactttgacgac
ctagagaggaaatactggaaaaacttgacatttgtgtcgcccatttacggtgcagatgtc
agcggctccatctatgatgaggacatccgagagtggaacattggccacctcaacacattg
ctggacatggtggagcaggagtgcggcatcgttattgagggagtcaatacaccgtatctg
tattttggcatgtggaagaccacatttgcatggcacactgaggacatggacctctacagc
atcaactacctgcacttcggacagtccaagtcctggtacgccatcccacctgaacacggc
aagaggctggagaggctggcacaaggattcttccctggcagttcccaaggctgcgatgct
ttccttcgccacaagatgacgctgttatctccatccatcctaaagaaatatagcattcca
tttgacaggattactcagaatgaaggggagttcatgatcacctttccgtatggctaccat
gccggcttcaaccacggcttcaactgtgcggagtccacgaactttgccaccctgcgctgg
gtagactacggcaagatggccacccagtgcacctgccgtaaggacatggtgaagatctcc
atggacgtgtttgtgcgcagcctgcagcccgatcgctacgagctgtggaagcagggcaag
gactccatggtgttggaccatctcaaggccactgagctcaacagccctgaactcgagcgc
tggagggaacatcgtgtcactttcagagaaaacctgctgcgaagggccatgcagaagatg
aaactgttccgtcgtctgaagctggacgaagtgaaggtgctggcgcaagaaggcattgag
ctgaacgctgccgagtaccagcgtcaggtggaggaacgcgatgccaagcgcaagcaggag
agggaggagcgtttagccagagaggccatgatgaccctggaagccatggagcgtgaggag
cagaaggcggctgaggcagctgcagctgaggcagctttagcagctgagactccagccatt
gaagcagaagcacatgaggccaagccacagaacctgacagaagacggtgagaaaaagaag
cagaaaaggctaaaaaagattccaaacatccaaaacgccatcactggatttgaggcggtg
tttgagcagtttgcgacaggcggcacaaggacttcagacaacgccatagtcggtgaacta
gaggctgggaaacctcttacctcacagcagagtgacatcacagcagacaacaagctggat
gcatgctaccccaagatgaagatcccaactggggtgaaaaagagtcggcgacatcccctc
agcaaaccacccatgctctcccctctgtccatcgttaaacaagagctgaccagtgacaaa
gatctgtcctcccccgggccgctggacagtgacatgaagaaacaggagcacctgtggcag
aataacgaacccaacttccttgcagagaagtccttcaacgctgcagtggcaccactaaaa
ccttactgtgctgtctgttcactcttctgtccctacaactcgccacataaagatgtgtcc
agtgagcccccaatcacccccaccccccgtccaggcagcatgactcgcccactggtccca
gagatgtgcttcagcgttgggtcaggaaacaccgaacctccacccaccaaccatcacatt
ggagaggatggaaccagtgtcctgctttgctgttcatcttgcaaaatgcaggttcacgcc
agttgttacggtgtcaaaccagagtctgtcagtgattcctggacgtgctccagatgtgca
gcaggagcctggacagtgaattgttgtctttgcaacctgcgtggaggagcttttaaaaag
accgtggacaactgttgggtccacatcatctgtgccatcgctgtggctgaggctcgcttt
gtcaacgccattgaaagggagccagtggacatcagtgctgttccagaaacacgcaagaat
ctgaagtgcgtgttctgccacgggaagaactccagtccgaaccgcggcgcctgcatccag
tgctcgaacgagaactgcgccacctccttccacgtcacctgcgcccaaatcgccggagtg
gtcatgaagcctgcggactggccctacgtggtgtcggtcacctgccaccggcacaccaag
gtccccaccaagtcgcggtcagcaaccagagccccgccctgtccgaacgtgggccagaga
gtgattggccgcaacgctgacggctggtattaccattgcaccattatcggaacggcaacg
cagacgttctacgaggtcaactttgatgacggctcatactgtgacaacgtgcacccagaa
aacctactgagtcacgactgcctgcggaacggtctccccgaaatcggggagttgatcgtg
gtctgcacgtccgagggtcaggtcctcaacgcttacttcatcaaacagcacgtccacaag
ctctaccaggtcgagtttcaggaccagactcagctgatgctcaaacactccgagatccac
cagctggacctggagctgcccaaaagggtccgagcccgacttgcgattaatgctccccag
gaggaggccccctcagcagatgaagcccaagcagccaaacgccgctgtctgccgcctggc
ccagcccaaccgactgagacccccaccaatataatcactccgccctcctgccccctactg
gcagccctggtagacgcaccagcagcaacacgcgagagtattagtacgccgcagacctca
caacctctgtccccgctcggcatgtaccaactggagtcccccgtcccaaccagcagtatt
catgtggacgcagagaccccaatggacacgagcgtcctcttcagggaagctctaagggag
tcatccctggcctcggacccaacgctgactcctcagtcgacccctttccggtcgacatta
aactctgaccccctcctgtccgccccgtcccctcccccgccgccccagcacatgtccgac
agctacacgccgagcagcagctacgtttcctacatggagactctgctcaactcacatttc
cctcaggatgacgggtccggacccctgtattaa

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